RchiOBHm_Chr5g0038341

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0002054
Physical Location & Seq
Reverse (-)
32902431 .. 32905033
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2238 bp
ATGGCAAAGAGAGCAGAAACGTCACATTCTCATCGCATATACGAGGAACGAGAAGAGAAACTCGTGTCTTCAAAAGACGGGAAACAATTCAAAAGAGTCGCAAGGTTTCTCAAACCCTGTGCTCCGAATTCGAGCAAAGCAGTGGGACCCTCAAATACTCCATTGTTGTCTGACGTCTTTCCTCACAGTCTTCAACAATGGCCGTCCACGGTTGTGTTCCCAGGTTCCAAGAAGCCCCAGAAAAAATGGGTGGAGTGGATTGATAGGCTGGCCGGAAAGTACTGTACTATTTGGAACCAAGCTGGGATTTGCGATGCTATTATGAGCTCGAAATATGAGACCAACTTTAACAAGGATTTGGTGCTGGTTTTGGCTGAGTTTTGGTGCTCGGAGACTAATACGTTCTTGTTTGATTGGGGCGAAGCGACGATCACAATGGAGGATGTGATGGTTCTAGGTGGGTTTTCGGTTCTGGGTAAGCAGGTGACAAGGCCCATTAATGGGGTGTTGATGGAAACAGTGGAGGAGATGGAGAAGAAGAAGACAGAGCTGACTAGAACTCCGGCCAGGAAAGCTTATCACTTAAACTGGATGACGCATTTTATGAAGCTTCAGGACTACAAGCATGAACATGTGGCATTCCTGTCTCTGTGGTTGGCAAGGTTCGTCTTTCCTTCTCTTCCTGAAGACAGCTTAGGCAAACATGTGTTTCCCATTGCTGTTCTTTTGTCACAGGGCACTAGAGTTGCTCTGGCTCCTGCAGTTCTTGCAGGGCTTTTCAGAGATTTAAGCTTTTTGGAAAACCAAGCAATTAAGGGTGAGGAGATGATCTCTGTTTGGAGCCCATTTCAGCTGTTGCAGTTGTGGGCGTTAGAGAGGTTTCAGGGTGTGCTTAAGAGTCCACCAAAGAGACTGAACCCCGGTGAGCCTAGGGCGGCTCGGTGGAACAAAGTGAACATTAAGATTAGTCTTCCTGATGTGAGGAGAGAGGTTAACTTGGCTAAGAACTTTCGGTGGCGGCCTTATACTGCTGAACTGACCAATTGGCTACATGGTTCTTACTACCAAGCTAAGGAACTGTGCTGTTATGATAAAACTACGGACCAGAATTTGCAGTCTTATGTTAAATGCTTGTGTTGTGCTAAGTTGGTTGGAGTAGAAGATTGTAAGGAGAAGTATTTGCCGCACAGGGTGGCAATGCAGTTTGGAATTGATCAAGATCTTCCTGGGGATCCTGTTGAACGCTCAGGGTTGGATTGTAACTCGGGCACTACCGATGTTCGTTTCTTTCTTCCAGGACGGTTCTTTGGGCCGAGTGTAACAGCTAGGTACTCATATTGGTGGGGAATATATAAGTCTGATCGTGCGGATGCAATCAAAGATGATGTCAAAGTGGCTGAAAAAAAGATTAAGGAGAAGAGTACTCATCATCACTCCATGGAAGAGAAGAATTTAAAGGCGCATAAGGCATCTAGAAAAGCTTTATCAAAGTGTGAACTTGAAAAGAACCACTTCTGTGCTGTGCCTAAAGTCCCAAGAAAATCCAATTGTGCTGTCAGGACACAACCATCAGCCACTGCTCAATTTCCCAAGAAGGTCAAGAAAGATTTGTCCCTAAATCATAGAGGTGGTGGCGATATTCCTCTATTGAAACAAAGGGGACTTGTGGAAAAGAGACCGGCTTGTCTCCGTAATGCTTCGACAACCAGGAAATCCACAAAATATGTTTCCTCACAGTCACGTAACCCAAATGAAAATATGAAGAAACGGAAGCTGGCTACACCAACTGAAGAGTTTCCTGCTAAGAAAAGAAATACTAGCGAGTATGGCAAAAATCTTTGGAGGGTTGCTACAAAAGGGACGAAGGATAGTGATATTGCAAATGTTCAAAGTAATGTCAGGATAACGCAAGAGCAGCAAGTGAGAGCTAAAGTATCAGACAAAGGTTCTGCAAAAGGTGGGGAGAAAGCAATGGCTGACGGGTCTCTGAAGAAACCCATGGGGGTTGATGGCCATAAAGTGAAACAATCTGAAAGGTGTGCTGCAAAAGGTGGGAAAAAAGCAATGGCTGAAAGGACTCTGAAGAAACCCATGGAGGCCGATGGTCATAAAGTGAAACAATCCAAAAGGGGTGCTGTGAAAGAAGTAAAGAGAACGATGGAGAATGCTAGAACTAGACCTCAGAAAGATGGATTACTGATGAGGGTTCAGAATCTGGAGAAAATTGTGGGGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

745

Amino Acids

84.48

Weight (kDa)

9.76

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 102 - 412 5.7e-87 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 472
AasI GACNNNNNNGTC 1 cut(s) 1683
AatII GACGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 472
AciI CCGC 4 cut(s) 935, 1018, 1184, 1367
AclWI GGATC 2 cut(s) 1226, 1239
AcoI YGGCCR 4 cut(s) 200, 270, 564, 2011
AcsI RAATTY 3 cut(s) 127, 1108, 1450
AcuI CTGAAG 5 cut(s) 596, 705, 1809, 2009, 2102
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 1192
AfaI GTAC 4 cut(s) 281, 286, 1331, 1423
AfiI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
AflII CTTAAG 1 cut(s) 893
AflIII ACRYGT 2 cut(s) 631, 703
AgsI TTSAA 7 cut(s) 72, 91, 194, 1241, 1502, 1651, 1889
AjnI CCWGG 5 cut(s) 220, 566, 1225, 1294, 1706
AleI CACNNNNGTG 2 cut(s) 212, 1515
Alw21I GWGCWC 3 cut(s) 124, 329, 389
Alw26I GTCTC 7 cut(s) 332, 386, 651, 904, 1669, 1691, 1989
AlwI GGATC 2 cut(s) 1226, 1239
AlwNI CAGNNNCTG 2 cut(s) 1577, 2215
Ama87I CYCGRG 1 cut(s) 1264
AoxI GGCC 8 cut(s) 200, 270, 491, 564, 1019, 1310, 2011, 2097
ApeKI GCWGC 2 cut(s) 1915, 2042
ApoI RAATTY 3 cut(s) 127, 1108, 1450
ArsI GACNNNNNNTTYG 2 cut(s) 1371, 1403
AseI ATTAAT 1 cut(s) 498
Asp700I GAANNNNTTC 3 cut(s) 86, 1511, 1794
AspA2I CCTAGG 1 cut(s) 929
AspLEI GCGC 1 cut(s) 1462
AspS9I GGNCC 4 cut(s) 146, 492, 1102, 1310
AsuC2I CCSGG 1 cut(s) 921
AsuHPI GGTGA 3 cut(s) 496, 830, 935
AvaI CYCGRG 1 cut(s) 1264
AvaII GGWCC 2 cut(s) 146, 1102
AvrII CCTAGG 1 cut(s) 929
BaeGI GKGCMC 2 cut(s) 740, 1271
BalI TGGCCA 1 cut(s) 2013
BamHI GGATCC 1 cut(s) 1231
BanII GRGCYC 2 cut(s) 329, 845
BauI CACGAG 1 cut(s) 62
BbsI GAAGAC 5 cut(s) 60, 182, 548, 693, 962
Bbv12I GWGCWC 3 cut(s) 124, 329, 389
BbvI GCAGC 2 cut(s) 1927, 2029
BccI CCATC 8 cut(s) 442, 505, 523, 1576, 2003, 2096, 2152, 2183
BceAI ACGGC 1 cut(s) 187
BciT130I CCWGG 5 cut(s) 222, 568, 1227, 1296, 1708
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 921
BcoDI GTCTC 7 cut(s) 332, 386, 651, 904, 1669, 1691, 1989
BfaI CTAG 9 cut(s) 455, 555, 741, 930, 1326, 1473, 1818, 2169, 2175
BfmI CTRYAG 1 cut(s) 759
BfrI CTTAAG 1 cut(s) 893
BfuAI ACCTGC 1 cut(s) 472
BglII AGATCT 1 cut(s) 1219
BisI GCNGC 5 cut(s) 936, 1019, 1184, 1916, 2043
BlnI CCTAGG 1 cut(s) 929
BlsI GCNGC 5 cut(s) 937, 1020, 1185, 1917, 2044
BmcAI AGTACT 2 cut(s) 281, 1423
Bme1390I CCNGG 6 cut(s) 222, 568, 921, 1227, 1296, 1708
Bme18I GGWCC 2 cut(s) 146, 1102
BmeT110I CYCGRG 1 cut(s) 1264
BmgT120I GGNCC 4 cut(s) 146, 492, 1102, 1310
BmiI GGNNCC 7 cut(s) 147, 148, 226, 296, 756, 842, 1233
BmrFI CCNGG 6 cut(s) 222, 568, 921, 1227, 1296, 1708
BmsI GCATC 3 cut(s) 304, 1360, 1478
BpiI GAAGAC 5 cut(s) 60, 182, 548, 693, 962
BplI GAGNNNNNCTC 2 cut(s) 815, 847
BpmI CTGGAG 1 cut(s) 2237
Bpu10I CCTNAGC 3 cut(s) 694, 1071, 1246
BpuMI CCSGG 1 cut(s) 921
BsaAI YACGTR 1 cut(s) 1742
BsaBI GATNNNNATC 1 cut(s) 1218
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 3 cut(s) 332, 1669, 1989
BsaJI CCNNGG 8 cut(s) 207, 220, 919, 929, 1226, 1437, 1998, 2091
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 501, 1072
Bse118I RCCGGY 1 cut(s) 1678
Bse1I ACTGG 1 cut(s) 593
Bse3DI GCAATG 4 cut(s) 714, 1203, 1977, 2070
Bse8I GATNNNNATC 1 cut(s) 1218
BseBI CCWGG 5 cut(s) 222, 568, 1227, 1296, 1708
BseDI CCNNGG 8 cut(s) 207, 220, 919, 929, 1226, 1437, 1998, 2091
BseGI GGATG 3 cut(s) 448, 597, 1375
BseJI GATNNNNATC 1 cut(s) 1218
BseLI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
BseMI GCAATG 4 cut(s) 714, 1203, 1977, 2070
BseMII CTCAG 3 cut(s) 366, 1260, 2195
BseNI ACTGG 1 cut(s) 593
BseRI GAGGAG 3 cut(s) 539, 836, 997
BseSI GKGCMC 2 cut(s) 740, 1271
BseXI GCAGC 2 cut(s) 1927, 2029
BseYI CCCAGC 1 cut(s) 302
BshFI GGCC 8 cut(s) 202, 272, 493, 566, 1021, 1312, 2013, 2099
BsiHKAI GWGCWC 3 cut(s) 124, 329, 389
BsiHKCI CYCGRG 1 cut(s) 1264
BsiSI CCGG 4 cut(s) 273, 563, 921, 1679
BslFI GGGAC 5 cut(s) 159, 1517, 1597, 1674, 1873
BslI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
BsmAI GTCTC 7 cut(s) 332, 386, 651, 904, 1669, 1691, 1989
BsmFI GGGAC 5 cut(s) 159, 1517, 1597, 1674, 1873
BsmI GAATGC 2 cut(s) 638, 2170
BsnI GGCC 8 cut(s) 202, 272, 493, 566, 1021, 1312, 2013, 2099
Bso31I GGTCTC 3 cut(s) 332, 1669, 1989
BsoBI CYCGRG 1 cut(s) 1264
Bsp1286I GDGCHC 6 cut(s) 124, 329, 389, 740, 845, 1271
Bsp143I GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
Bsp19I CCATGG 3 cut(s) 1437, 1998, 2091
BspACI CCGC 4 cut(s) 935, 1018, 1184, 1367
BspANI GGCC 8 cut(s) 202, 272, 493, 566, 1021, 1312, 2013, 2099
BspCNI CTCAG 3 cut(s) 367, 1259, 2194
BspLI GGNNCC 7 cut(s) 147, 148, 226, 296, 756, 842, 1233
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 2 cut(s) 1226, 1239
BspTI CTTAAG 1 cut(s) 893
BspTNI GGTCTC 3 cut(s) 332, 1669, 1989
BsrDI GCAATG 4 cut(s) 714, 1203, 1977, 2070
BsrFI RCCGGY 1 cut(s) 1678
BsrI ACTGG 1 cut(s) 593
BssAI RCCGGY 1 cut(s) 1678
BssECI CCNNGG 8 cut(s) 207, 220, 919, 929, 1226, 1437, 1998, 2091
BssMI GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 62
BssT1I CCWWGG 4 cut(s) 929, 1437, 1998, 2091
Bst2BI CACGAG 1 cut(s) 62
Bst2UI CCWGG 5 cut(s) 222, 568, 1227, 1296, 1708
Bst4CI ACNGT 7 cut(s) 188, 211, 284, 520, 1080, 1302, 1737
Bst6I CTCTTC 5 cut(s) 48, 684, 1412, 1437, 1785
BstACI GRCGYC 1 cut(s) 174
BstAFI CTTAAG 1 cut(s) 893
BstAPI GCANNNNNTGC 1 cut(s) 767
BstBAI YACGTR 1 cut(s) 1742
BstC8I GCNNGC 2 cut(s) 270, 1776
BstDEI CTNAG 8 cut(s) 375, 694, 1002, 1071, 1143, 1246, 1803, 2181
BstDSI CCRYGG 4 cut(s) 207, 1437, 1998, 2091
BstF5I GGATG 3 cut(s) 448, 597, 1375
BstHHI GCGC 1 cut(s) 1462
BstKTI GATC 6 cut(s) 432, 831, 1216, 1222, 1234, 1363
BstMAI GTCTC 7 cut(s) 332, 386, 651, 904, 1669, 1691, 1989
BstMBI GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
BstMWI GCNNNNNNNGC 6 cut(s) 11, 572, 767, 1466, 1827, 1915
BstNI CCWGG 5 cut(s) 222, 568, 1227, 1296, 1708
BstNSI RCATGY 2 cut(s) 635, 707
BstSCI CCNGG 6 cut(s) 220, 566, 919, 1225, 1294, 1706
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 2 cut(s) 740, 1271
BstV1I GCAGC 2 cut(s) 1927, 2029
BstV2I GAAGAC 5 cut(s) 60, 182, 548, 693, 962
BstX2I RGATCY 2 cut(s) 1219, 1231
BstYI RGATCY 2 cut(s) 1219, 1231
BsuRI GGCC 8 cut(s) 202, 272, 493, 566, 1021, 1312, 2013, 2099
BtgI CCRYGG 4 cut(s) 207, 1437, 1998, 2091
BtgZI GCGATG 2 cut(s) 17, 327
BtsCI GGATG 3 cut(s) 448, 597, 1375
BtsI GCAGTG 2 cut(s) 147, 1575
BtsIMutI CAGTG 3 cut(s) 147, 525, 1575
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 2 cut(s) 270, 1776
CaiI CAGNNNCTG 2 cut(s) 1577, 2215
CfoI GCGC 1 cut(s) 1462
Cfr10I RCCGGY 1 cut(s) 1678
Cfr13I GGNCC 4 cut(s) 146, 492, 1102, 1310
CseI GACGC 1 cut(s) 604
Csp6I GTAC 4 cut(s) 280, 285, 1330, 1422
CviAII CATG 7 cut(s) 626, 632, 704, 1052, 1438, 1999, 2092
CviQI GTAC 4 cut(s) 280, 285, 1330, 1422
DdeI CTNAG 8 cut(s) 375, 694, 1002, 1071, 1143, 1246, 1803, 2181
DpnI GATC 6 cut(s) 431, 830, 1215, 1221, 1233, 1362
DpnII GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
DraI TTTAAA 1 cut(s) 1455
DraIII CACNNNGTG 1 cut(s) 1192
DrdI GACNNNNNNGTC 1 cut(s) 1683
DseDI GACNNNNNNGTC 1 cut(s) 1683
EaeI YGGCCR 4 cut(s) 200, 270, 564, 2011
Eam1104I CTCTTC 5 cut(s) 48, 684, 1412, 1437, 1785
EarI CTCTTC 5 cut(s) 48, 684, 1412, 1437, 1785
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 4 cut(s) 929, 1437, 1998, 2091
Eco24I GRGCYC 2 cut(s) 329, 845
Eco31I GGTCTC 3 cut(s) 332, 1669, 1989
Eco47I GGWCC 2 cut(s) 146, 1102
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 5 cut(s) 596, 705, 1809, 2009, 2102
Eco88I CYCGRG 1 cut(s) 1264
EcoICRI GAGCTC 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 5 cut(s) 220, 566, 1225, 1294, 1706
EcoT14I CCWWGG 4 cut(s) 929, 1437, 1998, 2091
EcoT38I GRGCYC 2 cut(s) 329, 845
ErhI CCWWGG 4 cut(s) 929, 1437, 1998, 2091
FaeI CATG 7 cut(s) 629, 635, 707, 1055, 1441, 2002, 2095
FalI AAGNNNNNCTT 2 cut(s) 1496, 1528
FaqI GGGAC 5 cut(s) 159, 1517, 1597, 1674, 1873
FatI CATG 7 cut(s) 625, 631, 703, 1051, 1437, 1998, 2091
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 5 cut(s) 936, 1019, 1184, 1916, 2043
FokI GGATG 3 cut(s) 455, 604, 1382
FriOI GRGCYC 2 cut(s) 329, 845
Fsp4HI GCNGC 5 cut(s) 936, 1019, 1184, 1916, 2043
FspBI CTAG 9 cut(s) 455, 555, 741, 930, 1326, 1473, 1818, 2169, 2175
GlaI GCGC 1 cut(s) 1461
GluI GCNGC 5 cut(s) 936, 1019, 1184, 1916, 2043
GsaI CCCAGC 1 cut(s) 306
GsuI CTGGAG 1 cut(s) 2237
HaeIII GGCC 8 cut(s) 202, 272, 493, 566, 1021, 1312, 2013, 2099
HapII CCGG 4 cut(s) 273, 563, 921, 1679
HgaI GACGC 1 cut(s) 604
HhaI GCGC 1 cut(s) 1462
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 7 cut(s) 629, 635, 707, 1055, 1441, 2002, 2095
Hin6I GCGC 1 cut(s) 1460
HinP1I GCGC 1 cut(s) 1460
HincII GTYRAC 1 cut(s) 994
HindII GTYRAC 1 cut(s) 994
HindIII AAGCTT 4 cut(s) 573, 608, 790, 1479
HinfI GANTC 4 cut(s) 96, 898, 2077, 2212
HpaI GTTAAC 1 cut(s) 994
HpaII CCGG 4 cut(s) 273, 563, 921, 1679
HphI GGTGA 3 cut(s) 496, 830, 935
Hpy166II GTNNAC 5 cut(s) 207, 902, 955, 994, 1496
Hpy188III TCNNGA 9 cut(s) 614, 683, 974, 1217, 1473, 1558, 1600, 1900, 2216
Hpy8I GTNNAC 5 cut(s) 207, 902, 955, 994, 1496
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 3 cut(s) 684, 1588, 1858
HpyCH4III ACNGT 7 cut(s) 188, 211, 284, 520, 1080, 1302, 1737
HpyCH4IV ACGT 4 cut(s) 20, 174, 401, 1741
HpyCH4V TGCA 9 cut(s) 761, 770, 859, 1114, 1201, 1373, 1880, 1952, 2045
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 572, 767, 1466, 1827, 1915
HpyF3I CTNAG 8 cut(s) 375, 694, 1002, 1071, 1143, 1246, 1803, 2181
HpySE526I ACGT 4 cut(s) 20, 174, 401, 1741
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 7 cut(s) 629, 635, 707, 1055, 1441, 2002, 2095
HspAI GCGC 1 cut(s) 1460
KflI GGGWCCC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 1213
KspAI GTTAAC 1 cut(s) 994
Kzo9I GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
LmnI GCTCC 3 cut(s) 127, 760, 840
Lsp1109I GCAGC 2 cut(s) 1927, 2029
LweI GCATC 3 cut(s) 304, 1360, 1478
MaeI CTAG 9 cut(s) 455, 555, 741, 930, 1326, 1473, 1818, 2169, 2175
MaeII ACGT 4 cut(s) 20, 174, 401, 1741
MaeIII GTNAC 7 cut(s) 21, 484, 729, 1259, 1318, 1737, 1742
MalI GATC 6 cut(s) 431, 830, 1215, 1221, 1233, 1362
MboI GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
MfeI CAATTG 2 cut(s) 1042, 1546
MflI RGATCY 2 cut(s) 1219, 1231
MhlI GDGCHC 6 cut(s) 124, 329, 389, 740, 845, 1271
MlsI TGGCCA 1 cut(s) 2013
MluNI TGGCCA 1 cut(s) 2013
MlyI GAGTC 3 cut(s) 105, 907, 2071
MmeI TCCRAC 2 cut(s) 1132, 1233
Mox20I TGGCCA 1 cut(s) 2013
MroXI GAANNNNTTC 3 cut(s) 86, 1511, 1794
MscI TGGCCA 1 cut(s) 2013
MslI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1515, 1626
Msp20I TGGCCA 1 cut(s) 2013
MspA1I CMGCKG 1 cut(s) 853
MspCI CTTAAG 1 cut(s) 893
MspI CCGG 4 cut(s) 273, 563, 921, 1679
MspR9I CCNGG 6 cut(s) 222, 568, 921, 1227, 1296, 1708
MunI CAATTG 2 cut(s) 1042, 1546
Mva1269I GAATGC 2 cut(s) 638, 2170
MvaI CCWGG 5 cut(s) 222, 568, 1227, 1296, 1708
MwoI GCNNNNNNNGC 6 cut(s) 11, 572, 767, 1466, 1827, 1915
NciI CCSGG 1 cut(s) 921
NcoI CCATGG 3 cut(s) 1437, 1998, 2091
NdeII GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
NlaIII CATG 7 cut(s) 629, 635, 707, 1055, 1441, 2002, 2095
NlaIV GGNNCC 7 cut(s) 147, 148, 226, 296, 756, 842, 1233
NmeAIII GCCGAG 1 cut(s) 1338
NmuCI GTSAC 4 cut(s) 21, 484, 729, 1737
NspI RCATGY 2 cut(s) 635, 707
OliI CACNNNNGTG 2 cut(s) 212, 1515
PaqCI CACCTGC 1 cut(s) 472
PciI ACATGT 2 cut(s) 631, 703
PctI GAATGC 2 cut(s) 638, 2170
PdmI GAANNNNTTC 3 cut(s) 86, 1511, 1794
PfeI GAWTC 1 cut(s) 2212
PfoI TCCNGGA 1 cut(s) 1294
PkrI GCNGC 5 cut(s) 937, 1020, 1185, 1917, 2044
PleI GAGTC 3 cut(s) 104, 906, 2071
PpsI GAGTC 3 cut(s) 104, 906, 2071
Ppu21I YACGTR 1 cut(s) 1742
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 631, 703
PshBI ATTAAT 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 5 cut(s) 220, 566, 1225, 1294, 1706
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 5 cut(s) 220, 566, 1225, 1294, 1706
PspN4I GGNNCC 7 cut(s) 147, 148, 226, 296, 756, 842, 1233
PspPI GGNCC 4 cut(s) 146, 492, 1102, 1310
PspPPI RGGWCCY 1 cut(s) 146
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 2 cut(s) 1577, 2215
PsuI RGATCY 2 cut(s) 1219, 1231
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 4 cut(s) 281, 286, 1331, 1423
RsaNI GTAC 4 cut(s) 280, 285, 1330, 1422
RseI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1515, 1626
SacI GAGCTC 1 cut(s) 329
SatI GCNGC 5 cut(s) 936, 1019, 1184, 1916, 2043
Sau3AI GATC 6 cut(s) 429, 828, 1213, 1219, 1231, 1360
Sau96I GGNCC 4 cut(s) 146, 492, 1102, 1310
ScaI AGTACT 2 cut(s) 281, 1423
SchI GAGTC 3 cut(s) 105, 907, 2071
ScrFI CCNGG 6 cut(s) 222, 568, 921, 1227, 1296, 1708
SduI GDGCHC 6 cut(s) 124, 329, 389, 740, 845, 1271
SfaNI GCATC 3 cut(s) 304, 1360, 1478
SfcI CTRYAG 1 cut(s) 759
SinI GGWCC 2 cut(s) 146, 1102
SmiMI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1515, 1626
SmlI CTYRAG 1 cut(s) 893
SmoI CTYRAG 1 cut(s) 893
SsiI CCGC 4 cut(s) 935, 1018, 1184, 1367
SspMI CTAG 9 cut(s) 455, 555, 741, 930, 1326, 1473, 1818, 2169, 2175
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 6 cut(s) 220, 566, 919, 1225, 1294, 1706
StyI CCWWGG 4 cut(s) 929, 1437, 1998, 2091
TaaI ACNGT 7 cut(s) 188, 211, 284, 520, 1080, 1302, 1737
TaiI ACGT 4 cut(s) 23, 177, 404, 1744
TaqI TCGA 3 cut(s) 131, 329, 1700
TatI WGTACW 3 cut(s) 279, 284, 1421
TauI GCSGC 3 cut(s) 938, 1021, 1186
TfiI GAWTC 1 cut(s) 2212
TscAI CASTG 3 cut(s) 147, 525, 1582
TseFI GTSAC 4 cut(s) 21, 484, 729, 1737
TseI GCWGC 2 cut(s) 1915, 2042
Tsp45I GTSAC 4 cut(s) 21, 484, 729, 1737
TspDTI ATGAA 4 cut(s) 620, 642, 1767, 1775
TspGWI ACGGA 3 cut(s) 1115, 1679, 1783
TspRI CASTG 3 cut(s) 147, 525, 1582
Vha464I CTTAAG 1 cut(s) 893
VpaK11BI GGWCC 2 cut(s) 146, 1102
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 3 cut(s) 127, 1108, 1450
XbaI TCTAGA 1 cut(s) 1472
XceI RCATGY 2 cut(s) 635, 707
XmaJI CCTAGG 1 cut(s) 929
XmnI GAANNNNTTC 3 cut(s) 86, 1511, 1794
XspI CTAG 9 cut(s) 455, 555, 741, 930, 1326, 1473, 1818, 2169, 2175
ZraI GACGTC 1 cut(s) 175
ZrmI AGTACT 2 cut(s) 281, 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.