Rw5G024320

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0002054
Physical Location & Seq
Reverse (-)
34549704 .. 34551938
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024320.1

Sequence Viewer

Length: 2235 bp
ATGGTGAAGAGAGCAGAAACGTCACATTCTCATAGCATATACGAGGAACGAGAAGAGAAACTCGTATCTTCAAAAGACGGGAAGCAGTTCAGAAGAGTCGCAAGGTTTCTCAAACCCTGTGCTCCGAATTCGAGCAAAGCGGTGGGACCCTCAAATACTCCATTGTTGTCTGACGTCTTTCCTCAAAGTCTTCAACAATGGCCGTCCACGGTTGTGTTCCCGGGTTGCAAGAAGCCCCAGAAAAAATGGGTGGAGTGGATTGGTAGGCTGGCCGGAAAGTACTGTACTATTTGGAACCAAGCTGGGATTTGCGATGCTATTATGAGCTCGAAGTATGAGACTAACTTTAACAAGGATTTGGTGCTGGTTTTGGCCGAGTTTTGGTGCTCGGAGACTAATACATTCGTGTTTGATTGGGGCGAAGCGACGATCACAATGGAGGATGTGATGATTCTTGGTGGGTTTTCGGTTCTGGGTAAGCAGGTGACGAGGCCCATTAATGGGGTGTTGGTGGAAACAGTGGAGGAGATGGAGAAGAAGAAGACGGAGCTGACGAGAACTGCGGCGAAGAAAGCTTATCACTTTAACTGGATGACCCATTTTATGAAGCTTCAGGACTACAAGCATGAACATGTGGCATTCCTGTCTCTGTGGTTGGCAAGGTTTGTATTTCCTTCTCTTCCTGAAGAAAGCTTAGGCAAACATGTGTTTCCCATTGCGGTTCTTTTGTCACAGGGCACTAGAGTTGCTCTGGCTCCTGCAGTTCTTGCAGGGCTTTTCAGAGATTTAAGCTTTTTGAAAAACCAAGCCTTTAAGGGTGAGGAGATAATCTCTGTTTCGAGCCCATTTCAGCTGTTGCAGTTGTGGGCGTTGGAGAGGTTTCAGGGTGTGCTTAATAGTCCACCAAAGAGACTTAACCCCTGTGAGCCTAGGGCGGCTCGGTGGAACAAAGTGAACATTAAGATTAGTCTCCCTGATGTGAGGAGAGAGATTAATTTGGCTAAGAATTTTTGGTGGCGGCCTTATGCTGCTGAACTGACCAATTGGCGACATGGTTCTTACTACCTAGCTGATAAACTGTGCTTTTATGATAAAACTACGGACCAGAATTTGCAGTCTTATGTTGAATGCTTGTGTTGTGCTGAGTTGGTTGGAGTAGAAGATTGTAAGGAGAAGTATTTGCCGCACAGGGTGGCAATGCAGTTTGGAATTGATCAAGACCTTCCTGGGGATCCTACTGCATGCTCAGGGTTGGATGGTAACTCAGACACTACCGATGTTCGTTTCTTTCTTCCAGGATCGTTTTTTGAGCCGTGTGTAACTGCTAGATACTCATATTGGTGGGGACTATATAAGTCTGCTCGCGCAGATGCAATCAAAGATGGTGTCAAAGTGGCTGTAAAAAAGATTAAGGAGAAGAGTCATCATCACTCCGTGGAAGAGAAGAATTTCAAGGCGCATAAGGCATCTACAAAAGCTTTATCAAAGTGTGAACTTGAAAAGAACCACTTCTGTGCTGAGCCTGAAGTCTCAAGAAAATCCAATTGTGCTGTCAGGACACAACCATCAGCCACTGCTCAATTTCCCAAGAAGGTCAAGAAAGATTTGTTCTCAAATCATAGTGGTTGTGGCGATATTCCTCTGTTGAAACAAAGGGGACTTGTGGAAAAGAGACTGGCTTGTCTCCATAATGCTTCCACAACCGTGAAATCCACAAACGTTGTTTCCTCACAGTCACGTAACCCAAATGAAAATGTGAAGAAAAGGAAGCTGGCCGCACCAACTGAAGAGTTCCCTGCTAAGAAAAGAAATATTAGTGAGTATAACAAAAATCTTTTGATGGTTGCTACAAAAGGGATGAAGGGTAGTGATATTGCAAATGTTCGAAGTAATGTCAGGATAACACATGAGCATCAAGTTAGAGCTAAAGTATCAGACAAAGGTTATGCAAAAGGTGGGAAGAAAGCAATGGCTGAAGGGTCTCTGAAGAAACCCATGGAGGCTGATGGCCGTAAAGTGAAACAATCTGAAAGGTGTGCTGCAAAAGTTGGGAAGAAAGCAATGTCTGAAAGGTTTCTGAAGAAACCCATGGAGGCTGATGGACATAAAGTGAAACAATCCAAAAGGGGTGCTGTGAAAGAAGTCAAGAGAACAATGGAGAATGCTAGAACTAAAACTCAGAAAGATGGATTACTGATGAGGGTTCAGAAACTGGAGAAACTTTTGGGGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

744

Amino Acids

84.12

Weight (kDa)

9.6

Isoelectric Point (pI)

38.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 102 - 412 5.1e-85 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 472
AasI GACNNNNNNGTC 1 cut(s) 1680
AatII GACGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 472
AccII CGCG 1 cut(s) 1365
AciI CCGC 7 cut(s) 140, 563, 719, 935, 1018, 1184, 1776
AclI AACGTT 1 cut(s) 1719
AclWI GGATC 3 cut(s) 1226, 1239, 1306
AcoI YGGCCR 5 cut(s) 200, 270, 372, 1773, 2008
AcsI RAATTY 4 cut(s) 127, 1006, 1108, 1447
AcuI CTGAAG 7 cut(s) 596, 705, 1545, 1806, 1995, 2006, 2099
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 2 cut(s) 1192, 1435
AfaI GTAC 2 cut(s) 281, 286
AfiI CCNNNNNNNGG 4 cut(s) 381, 500, 501, 1228
AflIII ACRYGT 2 cut(s) 631, 703
AgsI TTSAA 7 cut(s) 72, 194, 799, 1127, 1453, 1499, 1648
AjnI CCWGG 2 cut(s) 1225, 1294
AleI CACNNNNGTG 3 cut(s) 212, 1512, 1703
Alw21I GWGCWC 3 cut(s) 124, 329, 389
Alw26I GTCTC 9 cut(s) 332, 386, 651, 904, 974, 1534, 1666, 1688, 1986
AlwI GGATC 3 cut(s) 1226, 1239, 1306
AlwNI CAGNNNCTG 2 cut(s) 1574, 2212
Ama87I CYCGRG 1 cut(s) 220
AoxI GGCC 7 cut(s) 200, 270, 372, 491, 1019, 1773, 2008
ApeKI GCWGC 2 cut(s) 1028, 2039
ApoI RAATTY 4 cut(s) 127, 1006, 1108, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 1371, 1403
AseI ATTAAT 2 cut(s) 498, 993
Asp700I GAANNNNTTC 4 cut(s) 86, 1448, 1508, 2073
AspA2I CCTAGG 1 cut(s) 929
AspLEI GCGC 2 cut(s) 1367, 1459
AspS9I GGNCC 3 cut(s) 146, 492, 1102
AsuC2I CCSGG 2 cut(s) 221, 222
AsuHPI GGTGA 3 cut(s) 16, 496, 830
AsuII TTCGAA 1 cut(s) 1885
AvaI CYCGRG 1 cut(s) 220
AvaII GGWCC 2 cut(s) 146, 1102
AvrII CCTAGG 1 cut(s) 929
BaeGI GKGCMC 1 cut(s) 740
BamHI GGATCC 1 cut(s) 1231
BanII GRGCYC 2 cut(s) 329, 845
BbsI GAAGAC 2 cut(s) 182, 548
Bbv12I GWGCWC 3 cut(s) 124, 329, 389
BbvI GCAGC 2 cut(s) 1015, 2026
BccI CCATC 8 cut(s) 523, 1250, 1376, 1573, 1834, 2000, 2093, 2180
BceAI ACGGC 3 cut(s) 187, 1297, 1995
BciT130I CCWGG 2 cut(s) 1227, 1296
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 2 cut(s) 221, 222
BcoDI GTCTC 9 cut(s) 332, 386, 651, 904, 974, 1534, 1666, 1688, 1986
BfaI CTAG 5 cut(s) 741, 930, 1067, 1326, 2166
BfmI CTRYAG 1 cut(s) 759
BfuAI ACCTGC 1 cut(s) 472
BisI GCNGC 7 cut(s) 564, 936, 1019, 1029, 1184, 1776, 2040
BlnI CCTAGG 1 cut(s) 929
BlpI GCTNAGC 1 cut(s) 1518
BlsI GCNGC 7 cut(s) 565, 937, 1020, 1030, 1185, 1777, 2041
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 4 cut(s) 221, 222, 1227, 1296
Bme18I GGWCC 2 cut(s) 146, 1102
BmeT110I CYCGRG 1 cut(s) 220
BmgT120I GGNCC 3 cut(s) 146, 492, 1102
BmiI GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
BmrFI CCNGG 4 cut(s) 221, 222, 1227, 1296
BmsI GCATC 4 cut(s) 304, 1360, 1475, 1921
BpiI GAAGAC 2 cut(s) 182, 548
BplI GAGNNNNNCTC 2 cut(s) 815, 847
BpmI CTGGAG 1 cut(s) 2234
Bpu10I CCTNAGC 2 cut(s) 694, 1246
Bpu1102I GCTNAGC 1 cut(s) 1518
Bpu14I TTCGAA 1 cut(s) 1885
BpuEI CTTGAG 1 cut(s) 1516
BpuMI CCSGG 2 cut(s) 221, 222
BsaAI YACGTR 1 cut(s) 1739
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 1986
BsaJI CCNNGG 7 cut(s) 207, 220, 929, 1226, 1434, 1995, 2088
Bsc4I CCNNNNNNNGG 4 cut(s) 381, 500, 501, 1228
Bse1I ACTGG 3 cut(s) 593, 1680, 2217
Bse3DI GCAATG 4 cut(s) 714, 1203, 1974, 2067
BseBI CCWGG 2 cut(s) 1227, 1296
BseDI CCNNGG 7 cut(s) 207, 220, 929, 1226, 1434, 1995, 2088
BseGI GGATG 4 cut(s) 448, 597, 1261, 1863
BseLI CCNNNNNNNGG 4 cut(s) 381, 500, 501, 1228
BseMI GCAATG 4 cut(s) 714, 1203, 1974, 2067
BseMII CTCAG 5 cut(s) 1134, 1260, 1278, 1509, 2192
BseNI ACTGG 3 cut(s) 593, 1680, 2217
BseRI GAGGAG 3 cut(s) 539, 836, 997
BseSI GKGCMC 1 cut(s) 740
BseXI GCAGC 2 cut(s) 1015, 2026
BseYI CCCAGC 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 1365
BshFI GGCC 7 cut(s) 202, 272, 374, 493, 1021, 1775, 2010
BsiHKAI GWGCWC 3 cut(s) 124, 329, 389
BsiHKCI CYCGRG 1 cut(s) 220
BsiSI CCGG 2 cut(s) 221, 273
BslFI GGGAC 3 cut(s) 159, 1359, 1671
BslI CCNNNNNNNGG 4 cut(s) 381, 500, 501, 1228
BsmAI GTCTC 9 cut(s) 332, 386, 651, 904, 974, 1534, 1666, 1688, 1986
BsmFI GGGAC 3 cut(s) 159, 1359, 1671
BsmI GAATGC 3 cut(s) 638, 1133, 2167
BsnI GGCC 7 cut(s) 202, 272, 374, 493, 1021, 1775, 2010
Bso31I GGTCTC 1 cut(s) 1986
BsoBI CYCGRG 1 cut(s) 220
Bsp119I TTCGAA 1 cut(s) 1885
Bsp1286I GDGCHC 5 cut(s) 124, 329, 389, 740, 845
Bsp143I GATC 4 cut(s) 429, 1213, 1231, 1298
Bsp1720I GCTNAGC 1 cut(s) 1518
Bsp19I CCATGG 2 cut(s) 1995, 2088
BspACI CCGC 7 cut(s) 140, 563, 719, 935, 1018, 1184, 1776
BspANI GGCC 7 cut(s) 202, 272, 374, 493, 1021, 1775, 2010
BspCNI CTCAG 5 cut(s) 1135, 1259, 1277, 1510, 2191
BspFNI CGCG 1 cut(s) 1365
BspLI GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 3 cut(s) 1226, 1239, 1306
BspT104I TTCGAA 1 cut(s) 1885
BspTNI GGTCTC 1 cut(s) 1986
BsrDI GCAATG 4 cut(s) 714, 1203, 1974, 2067
BsrI ACTGG 3 cut(s) 593, 1680, 2217
BssECI CCNNGG 7 cut(s) 207, 220, 929, 1226, 1434, 1995, 2088
BssMI GATC 4 cut(s) 429, 1213, 1231, 1298
BssNI GRCGYC 1 cut(s) 174
BssT1I CCWWGG 3 cut(s) 929, 1995, 2088
Bst2UI CCWGG 2 cut(s) 1227, 1296
Bst4CI ACNGT 6 cut(s) 211, 284, 520, 1080, 1705, 1734
Bst6I CTCTTC 7 cut(s) 2, 48, 88, 684, 1412, 1434, 1782
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 767
BstBAI YACGTR 1 cut(s) 1739
BstBI TTCGAA 1 cut(s) 1885
BstC8I GCNNGC 4 cut(s) 270, 1243, 1363, 1773
BstDEI CTNAG 8 cut(s) 694, 1002, 1143, 1246, 1264, 1518, 1800, 2178
BstDSI CCRYGG 4 cut(s) 207, 1434, 1995, 2088
BstF5I GGATG 4 cut(s) 448, 597, 1261, 1863
BstFNI CGCG 1 cut(s) 1365
BstHHI GCGC 2 cut(s) 1367, 1459
BstKTI GATC 4 cut(s) 432, 1216, 1234, 1301
BstMAI GTCTC 9 cut(s) 332, 386, 651, 904, 974, 1534, 1666, 1688, 1986
BstMBI GATC 4 cut(s) 429, 1213, 1231, 1298
BstMWI GCNNNNNNNGC 3 cut(s) 572, 767, 1463
BstNI CCWGG 2 cut(s) 1227, 1296
BstNSI RCATGY 3 cut(s) 635, 707, 1245
BstSCI CCNGG 4 cut(s) 219, 220, 1225, 1294
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 1 cut(s) 740
BstUI CGCG 1 cut(s) 1365
BstV1I GCAGC 2 cut(s) 1015, 2026
BstV2I GAAGAC 2 cut(s) 182, 548
BstX2I RGATCY 1 cut(s) 1231
BstYI RGATCY 1 cut(s) 1231
BsuRI GGCC 7 cut(s) 202, 272, 374, 493, 1021, 1775, 2010
BtgI CCRYGG 4 cut(s) 207, 1434, 1995, 2088
BtgZI GCGATG 1 cut(s) 327
BtsCI GGATG 4 cut(s) 448, 597, 1261, 1863
BtsI GCAGTG 1 cut(s) 1572
BtsIMutI CAGTG 2 cut(s) 525, 1572
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 4 cut(s) 270, 1243, 1363, 1773
CaiI CAGNNNCTG 2 cut(s) 1574, 2212
CfoI GCGC 2 cut(s) 1367, 1459
Cfr13I GGNCC 3 cut(s) 146, 492, 1102
Cfr9I CCCGGG 1 cut(s) 220
Csp6I GTAC 2 cut(s) 280, 285
CspCI CAANNNNNGTGG 2 cut(s) 1702, 1737
CviAII CATG 8 cut(s) 626, 632, 704, 1052, 1242, 1907, 1996, 2089
CviQI GTAC 2 cut(s) 280, 285
DdeI CTNAG 8 cut(s) 694, 1002, 1143, 1246, 1264, 1518, 1800, 2178
DpnI GATC 4 cut(s) 431, 1215, 1233, 1300
DpnII GATC 4 cut(s) 429, 1213, 1231, 1298
DraIII CACNNNGTG 2 cut(s) 1192, 1435
DrdI GACNNNNNNGTC 1 cut(s) 1680
DseDI GACNNNNNNGTC 1 cut(s) 1680
EaeI YGGCCR 5 cut(s) 200, 270, 372, 1773, 2008
Eam1104I CTCTTC 7 cut(s) 2, 48, 88, 684, 1412, 1434, 1782
EarI CTCTTC 7 cut(s) 2, 48, 88, 684, 1412, 1434, 1782
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 3 cut(s) 929, 1995, 2088
Eco24I GRGCYC 2 cut(s) 329, 845
Eco31I GGTCTC 1 cut(s) 1986
Eco47I GGWCC 2 cut(s) 146, 1102
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 7 cut(s) 596, 705, 1545, 1806, 1995, 2006, 2099
Eco88I CYCGRG 1 cut(s) 220
EcoICRI GAGCTC 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 1225, 1294
EcoT14I CCWWGG 3 cut(s) 929, 1995, 2088
EcoT38I GRGCYC 2 cut(s) 329, 845
ErhI CCWWGG 3 cut(s) 929, 1995, 2088
FaeI CATG 8 cut(s) 629, 635, 707, 1055, 1245, 1910, 1999, 2092
FalI AAGNNNNNCTT 2 cut(s) 1493, 1525
FaqI GGGAC 3 cut(s) 159, 1359, 1671
FatI CATG 8 cut(s) 625, 631, 703, 1051, 1241, 1906, 1995, 2088
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 7 cut(s) 564, 936, 1019, 1029, 1184, 1776, 2040
FokI GGATG 4 cut(s) 455, 604, 1268, 1870
FriOI GRGCYC 2 cut(s) 329, 845
Fsp4HI GCNGC 7 cut(s) 564, 936, 1019, 1029, 1184, 1776, 2040
FspBI CTAG 5 cut(s) 741, 930, 1067, 1326, 2166
GlaI GCGC 2 cut(s) 1366, 1458
GluI GCNGC 7 cut(s) 564, 936, 1019, 1029, 1184, 1776, 2040
GsaI CCCAGC 1 cut(s) 306
GsuI CTGGAG 1 cut(s) 2234
HaeIII GGCC 7 cut(s) 202, 272, 374, 493, 1021, 1775, 2010
HapII CCGG 2 cut(s) 221, 273
HhaI GCGC 2 cut(s) 1367, 1459
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 8 cut(s) 629, 635, 707, 1055, 1245, 1910, 1999, 2092
Hin6I GCGC 2 cut(s) 1365, 1457
HinP1I GCGC 2 cut(s) 1365, 1457
HindIII AAGCTT 5 cut(s) 573, 608, 691, 790, 1476
HinfI GANTC 3 cut(s) 96, 451, 1420
HpaII CCGG 2 cut(s) 221, 273
HphI GGTGA 3 cut(s) 16, 496, 830
Hpy166II GTNNAC 4 cut(s) 207, 902, 955, 1493
Hpy188III TCNNGA 8 cut(s) 614, 683, 1217, 1533, 1555, 1597, 1897, 2146
Hpy8I GTNNAC 4 cut(s) 207, 902, 955, 1493
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 5 cut(s) 684, 1232, 1585, 1855, 1970
HpyCH4III ACNGT 6 cut(s) 211, 284, 520, 1080, 1705, 1734
HpyCH4IV ACGT 4 cut(s) 20, 174, 1719, 1738
HpyF10VI GCNNNNNNNGC 3 cut(s) 572, 767, 1463
HpyF3I CTNAG 8 cut(s) 694, 1002, 1143, 1246, 1264, 1518, 1800, 2178
HpySE526I ACGT 4 cut(s) 20, 174, 1719, 1738
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 8 cut(s) 629, 635, 707, 1055, 1245, 1910, 1999, 2092
HspAI GCGC 2 cut(s) 1365, 1457
KflI GGGWCCC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 4 cut(s) 429, 1213, 1231, 1298
LmnI GCTCC 3 cut(s) 127, 547, 760
Lsp1109I GCAGC 2 cut(s) 1015, 2026
LweI GCATC 4 cut(s) 304, 1360, 1475, 1921
MaeI CTAG 5 cut(s) 741, 930, 1067, 1326, 2166
MaeII ACGT 4 cut(s) 20, 174, 1719, 1738
MaeIII GTNAC 7 cut(s) 21, 484, 729, 1259, 1318, 1734, 1739
MalI GATC 4 cut(s) 431, 1215, 1233, 1300
MboI GATC 4 cut(s) 429, 1213, 1231, 1298
MfeI CAATTG 2 cut(s) 1042, 1543
MflI RGATCY 1 cut(s) 1231
MhlI GDGCHC 5 cut(s) 124, 329, 389, 740, 845
MluCI AATT 9 cut(s) 127, 994, 1006, 1042, 1108, 1209, 1447, 1543, 1580
MlyI GAGTC 2 cut(s) 105, 1429
MmeI TCCRAC 3 cut(s) 852, 1132, 1233
MroXI GAANNNNTTC 4 cut(s) 86, 1448, 1508, 2073
MslI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1512, 1703
MspA1I CMGCKG 1 cut(s) 853
MspI CCGG 2 cut(s) 221, 273
MspR9I CCNGG 4 cut(s) 221, 222, 1227, 1296
MunI CAATTG 2 cut(s) 1042, 1543
Mva1269I GAATGC 3 cut(s) 638, 1133, 2167
MvaI CCWGG 2 cut(s) 1227, 1296
MvnI CGCG 1 cut(s) 1365
MwoI GCNNNNNNNGC 3 cut(s) 572, 767, 1463
NciI CCSGG 2 cut(s) 221, 222
NcoI CCATGG 2 cut(s) 1995, 2088
NdeII GATC 4 cut(s) 429, 1213, 1231, 1298
NlaIII CATG 8 cut(s) 629, 635, 707, 1055, 1245, 1910, 1999, 2092
NlaIV GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 4 cut(s) 21, 484, 729, 1734
NspI RCATGY 3 cut(s) 635, 707, 1245
NspV TTCGAA 1 cut(s) 1885
OliI CACNNNNGTG 3 cut(s) 212, 1512, 1703
PaeI GCATGC 1 cut(s) 1245
PaqCI CACCTGC 1 cut(s) 472
PciI ACATGT 2 cut(s) 631, 703
PcsI WCGNNNNNNNCGW 1 cut(s) 551
PctI GAATGC 3 cut(s) 638, 1133, 2167
PdmI GAANNNNTTC 4 cut(s) 86, 1448, 1508, 2073
PfeI GAWTC 1 cut(s) 451
PfoI TCCNGGA 1 cut(s) 1294
PkrI GCNGC 7 cut(s) 565, 937, 1020, 1030, 1185, 1777, 2041
PleI GAGTC 2 cut(s) 104, 1428
PpsI GAGTC 2 cut(s) 104, 1428
Ppu21I YACGTR 1 cut(s) 1739
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 631, 703
PshBI ATTAAT 2 cut(s) 498, 993
Psp124BI GAGCTC 1 cut(s) 329
Psp1406I AACGTT 1 cut(s) 1719
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 1225, 1294
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 2 cut(s) 1225, 1294
PspN4I GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
PspPI GGNCC 3 cut(s) 146, 492, 1102
PspPPI RGGWCCY 1 cut(s) 146
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 2 cut(s) 1574, 2212
PsuI RGATCY 1 cut(s) 1231
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 2 cut(s) 281, 286
RsaNI GTAC 2 cut(s) 280, 285
RseI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1512, 1703
SacI GAGCTC 1 cut(s) 329
SatI GCNGC 7 cut(s) 564, 936, 1019, 1029, 1184, 1776, 2040
Sau3AI GATC 4 cut(s) 429, 1213, 1231, 1298
Sau96I GGNCC 3 cut(s) 146, 492, 1102
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 2 cut(s) 105, 1429
ScrFI CCNGG 4 cut(s) 221, 222, 1227, 1296
SduI GDGCHC 5 cut(s) 124, 329, 389, 740, 845
SfaNI GCATC 4 cut(s) 304, 1360, 1475, 1921
SfcI CTRYAG 1 cut(s) 759
SfuI TTCGAA 1 cut(s) 1885
SinI GGWCC 2 cut(s) 146, 1102
SmaI CCCGGG 1 cut(s) 222
SmiMI CAYNNNNRTG 5 cut(s) 212, 630, 1339, 1512, 1703
SmlI CTYRAG 1 cut(s) 1531
SmoI CTYRAG 1 cut(s) 1531
SphI GCATGC 1 cut(s) 1245
Sse9I AATT 9 cut(s) 127, 994, 1006, 1042, 1108, 1209, 1447, 1543, 1580
SsiI CCGC 7 cut(s) 140, 563, 719, 935, 1018, 1184, 1776
SspI AATATT 1 cut(s) 1813
SspMI CTAG 5 cut(s) 741, 930, 1067, 1326, 2166
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 4 cut(s) 219, 220, 1225, 1294
StyI CCWWGG 3 cut(s) 929, 1995, 2088
TaaI ACNGT 6 cut(s) 211, 284, 520, 1080, 1705, 1734
TaiI ACGT 4 cut(s) 23, 177, 1722, 1741
TaqI TCGA 4 cut(s) 131, 329, 839, 1885
TasI AATT 9 cut(s) 127, 994, 1006, 1042, 1108, 1209, 1447, 1543, 1580
TatI WGTACW 2 cut(s) 279, 284
TauI GCSGC 5 cut(s) 566, 938, 1021, 1186, 1778
TfiI GAWTC 1 cut(s) 451
TscAI CASTG 2 cut(s) 525, 1579
TseFI GTSAC 4 cut(s) 21, 484, 729, 1734
TseI GCWGC 2 cut(s) 1028, 2039
Tsp45I GTSAC 4 cut(s) 21, 484, 729, 1734
TspDTI ATGAA 4 cut(s) 620, 642, 1764, 1874
TspGWI ACGGA 3 cut(s) 560, 1115, 1423
TspMI CCCGGG 1 cut(s) 220
TspRI CASTG 2 cut(s) 525, 1579
VpaK11BI GGWCC 2 cut(s) 146, 1102
VspI ATTAAT 2 cut(s) 498, 993
XapI RAATTY 4 cut(s) 127, 1006, 1108, 1447
XceI RCATGY 3 cut(s) 635, 707, 1245
XmaI CCCGGG 1 cut(s) 220
XmaJI CCTAGG 1 cut(s) 929
XmnI GAANNNNTTC 4 cut(s) 86, 1448, 1508, 2073
XspI CTAG 5 cut(s) 741, 930, 1067, 1326, 2166
ZraI GACGTC 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.