RLG00000033852

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0002054
Physical Location & Seq
Reverse (-)
32998209 .. 33000443
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033852

Sequence Viewer

Length: 2061 bp
ATGGCGAAGAGAGCAGAAACGTCACATTCTCATCGCTTATACGAGGAACGAGAAGAGAAACTCGTGTCTTCAAAAGACGGGAAGCAGTTCAGAAGAGTCGCAAGGTTTCTCAAACCCTGTGCTCCGTATTCGAGCAAAGCAGTGGGACCCTCAAATACTCCATTGTTGTCTGACGTCTTTCCTCACAGTCTTCAACAATGGCCGTCCACGGTTGTCTTCCCAGGTTGCAAGAAGCCCCAGAAAAAATGGGAGGAGTGGATTGATAGGCTGGCCGGAAAGTACTGTGGGTTTTCGGTTCTGGGTGAGCAGGTGACGAGGCCCATTAATGGGGTGTTGATGGAAACAGTGGAGGAGATGGAGAAGAAGAAGACGGAGCTGACGAGAACTCCGGCGAAGAAAGCTTATCACTTTAACTGGATGACCCATTTTATGAAGCTTCAGGACTACAAGCATGAACATGTGGCATTCCTGTCTCTGTGGTTGGCAAGGTTTGTATTTCCTTCTCTTCCTGAAGAAAGCTTAGGCAAACATGTGTTTCCCATTGCGGTTCTTTTGTCACAGGGCACTAGAGTTGCTCTGGCTCCTGCAGTTCTTGCAGGGCTTTTCAGAGATTTAAGCTTTTTGAAAAACCAAGCCTTTAAGGGTGAGGAGATAATCTCTGTTTCGAGCCCATTTCAGCTGTTGCAGTTGTGGGCGTTGGAGAGGTTTCAGGGTGTGCTTAAGAGTCCACCAAAGAGACTTAACCCCTGTGAGCCAAGGGCGGCTCGGTGGAACAAAGTGAACATTAAGATTAGTCTCCCTGATGTGAGGAGAGAGATTAATTTGGCTAAAAAATTTCGGTGGCGGCCTTATGCTGCTGAACTGACCAATTGGCGACATGGTTCTTACCACCTAGCTGATAAACTGTGCTTTTATGGTAAAACTACGGACCAGAATTTGCAGTCTTATGTTGAATGCTTGTGTTGTGCTGAGTTGGTTGGAGTAGAAGATTGTAAGGAGAAGTATTTGCCGCACAGGGTGGCAATGCAGTTTGGAATTGATCAAGACCTTCCTGGGGATCCTGCTGCATGCTCAGGGTTGGATGGTAACTCGGACACTACCGATGTTTGTTTCTTTCTTCCAGGACGGTTTTTTGAGCCGTGTGTAACTGCCAGATACTCATATTGGTGGGGACTATATAAGTCTGCTCGCGCGGATGCAATCAAAGATGGTGTCAAAGTGGCTGTAAAAAAGATTAAGGAGAAGAGTCATCTTCACTCCGTGGAAGAGAAGAATTTCAAGGTGCATAAGGCATCTACAAAAGCTTTATCAAAGTGTGAACTTGAAAAGAACCACTTCTGTGCTGTGCCTGAAGTCTCAAGAAAATCCAATTGTGCTGTCAGGACACAACCCTCAACCACTGCTCAATTTCCCAAGATGGTCAAGAAAGATTTGTCTCCAAATCATAGTGGTGGCCGCAATATTCCTCTGTTGAAACAGAGGAGACTTGTGGGAAAGAGACCGACTTGTCTCCGTAATGCTTCCACAACCAGGAAATCCACAAACGTTGTTTCGTCACAGTCACGTAACCCAGCTAAAAATGTGAAGAAACGGAAACTGGCCACACCAACTGAAGAGTTTCCTTCTAAGAAAAGAAATATTAGTGAGTATACCAAAAATCTTTGGATGGTTGCTACAAAAGGGAAGCACGGTAGTGATATTGCAAATGTTCAAAGTAATGTTAGGATAACGCATGAGCATCAAGTGAGAGCTAAAGTATCAGACGAAGGTTCTGCAAAAGGAGGGAAGAAAGCAATGGCTGAAGGGTCTCTGAAGAAACCCATGGAGGCTGATGGCCGTCAAGTGAAACAAGCTGAAAGGTGTGCTGCAAAAGTTGGGAAGAAAGCAATGTCCGAAAGGTCTCTGAAGAAACCCATGGAGGCTGATGGACATAAAGTGAAACAATCCAAAAGGGGTGCAGTGAAAGAAGTCAAGAGAACAATGGAGAATGCTAGAACTAAAACTCAGAAAAATGGATTACTGATGAGGGTTCAGAAACTGGAGAACCTTTTGGGGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

687

Amino Acids

77.67

Weight (kDa)

9.88

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 95 - 354 3.5e-59 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 298
AasI GACNNNNNNGTC 1 cut(s) 1506
AatII GACGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 298
AccI GTMKAC 1 cut(s) 1649
AccII CGCG 2 cut(s) 1191, 1193
AciI CCGC 6 cut(s) 545, 761, 844, 1010, 1193, 1456
AclI AACGTT 1 cut(s) 1545
AclWI GGATC 2 cut(s) 1052, 1065
AcoI YGGCCR 5 cut(s) 200, 270, 1453, 1599, 1834
AcsI RAATTY 3 cut(s) 833, 934, 1273
AcuI CTGAAG 7 cut(s) 422, 531, 1371, 1632, 1821, 1832, 1925
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 2 cut(s) 1018, 1261
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 4 cut(s) 326, 327, 1054, 1530
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 2 cut(s) 457, 529
AgsI TTSAA 8 cut(s) 72, 194, 625, 953, 1279, 1325, 1474, 1712
AjnI CCWGG 4 cut(s) 220, 1051, 1120, 1529
AleI CACNNNNGTG 2 cut(s) 1338, 1692
Alw21I GWGCWC 1 cut(s) 124
AlwI GGATC 2 cut(s) 1052, 1065
AlwNI CAGNNNCTG 1 cut(s) 2038
AoxI GGCC 7 cut(s) 200, 270, 317, 845, 1453, 1599, 1834
ApeKI GCWGC 3 cut(s) 854, 1064, 1865
ApoI RAATTY 3 cut(s) 833, 934, 1273
ArsI GACNNNNNNTTYG 2 cut(s) 1197, 1229
AseI ATTAAT 2 cut(s) 324, 819
Asp700I GAANNNNTTC 4 cut(s) 86, 1274, 1334, 1617
AspLEI GCGC 1 cut(s) 1193
AspS9I GGNCC 3 cut(s) 146, 318, 928
AsuHPI GGTGA 3 cut(s) 314, 322, 656
AvaII GGWCC 2 cut(s) 146, 928
BaeGI GKGCMC 1 cut(s) 566
BalI TGGCCA 1 cut(s) 1601
BamHI GGATCC 1 cut(s) 1057
BanII GRGCYC 1 cut(s) 671
BauI CACGAG 1 cut(s) 62
BbsI GAAGAC 4 cut(s) 60, 182, 208, 374
Bbv12I GWGCWC 1 cut(s) 124
BbvI GCAGC 3 cut(s) 841, 1051, 1852
BccI CCATC 8 cut(s) 331, 349, 1076, 1202, 1411, 1660, 1826, 1919
BceAI ACGGC 3 cut(s) 187, 1123, 1821
BcgI CGANNNNNNTGC 2 cut(s) 1754, 1788
BciT130I CCWGG 4 cut(s) 222, 1053, 1122, 1531
BclI TGATCA 1 cut(s) 1039
BfaI CTAG 3 cut(s) 567, 893, 1992
BfmI CTRYAG 1 cut(s) 585
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 1 cut(s) 298
BisI GCNGC 7 cut(s) 762, 845, 855, 1010, 1065, 1456, 1866
BlsI GCNGC 7 cut(s) 763, 846, 856, 1011, 1066, 1457, 1867
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 4 cut(s) 222, 1053, 1122, 1531
Bme18I GGWCC 2 cut(s) 146, 928
BmgT120I GGNCC 3 cut(s) 146, 318, 928
BmiI GGNNCC 4 cut(s) 147, 148, 582, 1059
BmrFI CCNGG 4 cut(s) 222, 1053, 1122, 1531
BmsI GCATC 3 cut(s) 1186, 1301, 1747
BpiI GAAGAC 4 cut(s) 60, 182, 208, 374
BplI GAGNNNNNCTC 2 cut(s) 641, 673
BpmI CTGGAG 1 cut(s) 2060
Bpu10I CCTNAGC 2 cut(s) 520, 1072
BpuEI CTTGAG 1 cut(s) 1342
BsaAI YACGTR 1 cut(s) 1565
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 3 cut(s) 1492, 1812, 1905
BsaJI CCNNGG 7 cut(s) 207, 220, 755, 1052, 1260, 1821, 1914
BsaXI ACNNNNNCTCC 2 cut(s) 370, 400
Bsc4I CCNNNNNNNGG 4 cut(s) 326, 327, 1054, 1530
Bse1I ACTGG 3 cut(s) 419, 1602, 2043
Bse3DI GCAATG 4 cut(s) 540, 1029, 1800, 1893
BseBI CCWGG 4 cut(s) 222, 1053, 1122, 1531
BseDI CCNNGG 7 cut(s) 207, 220, 755, 1052, 1260, 1821, 1914
BseGI GGATG 4 cut(s) 423, 1087, 1201, 1671
BseLI CCNNNNNNNGG 4 cut(s) 326, 327, 1054, 1530
BseMI GCAATG 4 cut(s) 540, 1029, 1800, 1893
BseMII CTCAG 3 cut(s) 960, 1086, 2018
BseNI ACTGG 3 cut(s) 419, 1602, 2043
BseRI GAGGAG 5 cut(s) 266, 365, 662, 823, 1495
BseSI GKGCMC 1 cut(s) 566
BseXI GCAGC 3 cut(s) 841, 1051, 1852
BseYI CCCAGC 1 cut(s) 1570
BsgI GTGCAG 1 cut(s) 1977
Bsh1236I CGCG 2 cut(s) 1191, 1193
BshFI GGCC 7 cut(s) 202, 272, 319, 847, 1455, 1601, 1836
BsiHKAI GWGCWC 1 cut(s) 124
BsiSI CCGG 2 cut(s) 273, 389
BslFI GGGAC 2 cut(s) 159, 1185
BslI CCNNNNNNNGG 4 cut(s) 326, 327, 1054, 1530
BsmFI GGGAC 2 cut(s) 159, 1185
BsmI GAATGC 3 cut(s) 464, 959, 1993
BsnI GGCC 7 cut(s) 202, 272, 319, 847, 1455, 1601, 1836
Bso31I GGTCTC 3 cut(s) 1492, 1812, 1905
Bsp1286I GDGCHC 3 cut(s) 124, 566, 671
Bsp143I GATC 2 cut(s) 1039, 1057
Bsp19I CCATGG 2 cut(s) 1821, 1914
BspACI CCGC 6 cut(s) 545, 761, 844, 1010, 1193, 1456
BspANI GGCC 7 cut(s) 202, 272, 319, 847, 1455, 1601, 1836
BspCNI CTCAG 3 cut(s) 961, 1085, 2017
BspFNI CGCG 2 cut(s) 1191, 1193
BspLI GGNNCC 4 cut(s) 147, 148, 582, 1059
BspMAI CTGCAG 1 cut(s) 589
BspMI ACCTGC 1 cut(s) 298
BspPI GGATC 2 cut(s) 1052, 1065
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 3 cut(s) 1492, 1812, 1905
BsrDI GCAATG 4 cut(s) 540, 1029, 1800, 1893
BsrI ACTGG 3 cut(s) 419, 1602, 2043
BssECI CCNNGG 7 cut(s) 207, 220, 755, 1052, 1260, 1821, 1914
BssMI GATC 2 cut(s) 1039, 1057
BssNAI GTATAC 1 cut(s) 1650
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 62
BssT1I CCWWGG 3 cut(s) 755, 1821, 1914
Bst1107I GTATAC 1 cut(s) 1650
Bst2BI CACGAG 1 cut(s) 62
Bst2UI CCWGG 4 cut(s) 222, 1053, 1122, 1531
Bst4CI ACNGT 8 cut(s) 188, 211, 284, 346, 906, 1128, 1560, 1691
Bst6I CTCTTC 7 cut(s) 2, 48, 88, 510, 1238, 1260, 1608
BstACI GRCGYC 1 cut(s) 174
BstAFI CTTAAG 1 cut(s) 719
BstAPI GCANNNNNTGC 1 cut(s) 593
BstBAI YACGTR 1 cut(s) 1565
BstC8I GCNNGC 3 cut(s) 270, 1069, 1189
BstDEI CTNAG 5 cut(s) 520, 969, 1072, 1626, 2004
BstDSI CCRYGG 4 cut(s) 207, 1260, 1821, 1914
BstF5I GGATG 4 cut(s) 423, 1087, 1201, 1671
BstFNI CGCG 2 cut(s) 1191, 1193
BstHHI GCGC 1 cut(s) 1193
BstKTI GATC 2 cut(s) 1042, 1060
BstMBI GATC 2 cut(s) 1039, 1057
BstMWI GCNNNNNNNGC 3 cut(s) 11, 398, 593
BstNI CCWGG 4 cut(s) 222, 1053, 1122, 1531
BstNSI RCATGY 3 cut(s) 461, 533, 1071
BstSCI CCNGG 4 cut(s) 220, 1051, 1120, 1529
BstSFI CTRYAG 1 cut(s) 585
BstSLI GKGCMC 1 cut(s) 566
BstUI CGCG 2 cut(s) 1191, 1193
BstV1I GCAGC 3 cut(s) 841, 1051, 1852
BstV2I GAAGAC 4 cut(s) 60, 182, 208, 374
BstX2I RGATCY 1 cut(s) 1057
BstYI RGATCY 1 cut(s) 1057
BstZ17I GTATAC 1 cut(s) 1650
BsuRI GGCC 7 cut(s) 202, 272, 319, 847, 1455, 1601, 1836
BtgI CCRYGG 4 cut(s) 207, 1260, 1821, 1914
BtgZI GCGATG 1 cut(s) 17
BtsCI GGATG 4 cut(s) 423, 1087, 1201, 1671
BtsI GCAGTG 3 cut(s) 147, 1398, 1965
BtsIMutI CAGTG 4 cut(s) 147, 351, 1398, 1965
BveI ACCTGC 1 cut(s) 298
Cac8I GCNNGC 3 cut(s) 270, 1069, 1189
CaiI CAGNNNCTG 1 cut(s) 2038
CfoI GCGC 1 cut(s) 1193
Cfr13I GGNCC 3 cut(s) 146, 318, 928
Csp6I GTAC 1 cut(s) 280
CspCI CAANNNNNGTGG 2 cut(s) 1528, 1563
CviAII CATG 8 cut(s) 452, 458, 530, 878, 1068, 1733, 1822, 1915
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 5 cut(s) 520, 969, 1072, 1626, 2004
DpnI GATC 2 cut(s) 1041, 1059
DpnII GATC 2 cut(s) 1039, 1057
DraIII CACNNNGTG 2 cut(s) 1018, 1261
DrdI GACNNNNNNGTC 1 cut(s) 1506
DseDI GACNNNNNNGTC 1 cut(s) 1506
EaeI YGGCCR 5 cut(s) 200, 270, 1453, 1599, 1834
Eam1104I CTCTTC 7 cut(s) 2, 48, 88, 510, 1238, 1260, 1608
EarI CTCTTC 7 cut(s) 2, 48, 88, 510, 1238, 1260, 1608
Eco130I CCWWGG 3 cut(s) 755, 1821, 1914
Eco24I GRGCYC 1 cut(s) 671
Eco31I GGTCTC 3 cut(s) 1492, 1812, 1905
Eco47I GGWCC 2 cut(s) 146, 928
Eco57I CTGAAG 7 cut(s) 422, 531, 1371, 1632, 1821, 1832, 1925
EcoO109I RGGNCCY 1 cut(s) 146
EcoRII CCWGG 4 cut(s) 220, 1051, 1120, 1529
EcoT14I CCWWGG 3 cut(s) 755, 1821, 1914
EcoT38I GRGCYC 1 cut(s) 671
ErhI CCWWGG 3 cut(s) 755, 1821, 1914
FaeI CATG 8 cut(s) 455, 461, 533, 881, 1071, 1736, 1825, 1918
FalI AAGNNNNNCTT 2 cut(s) 1319, 1351
FaqI GGGAC 2 cut(s) 159, 1185
FatI CATG 8 cut(s) 451, 457, 529, 877, 1067, 1732, 1821, 1914
FbaI TGATCA 1 cut(s) 1039
FblI GTMKAC 1 cut(s) 1649
Fnu4HI GCNGC 7 cut(s) 762, 845, 855, 1010, 1065, 1456, 1866
FokI GGATG 4 cut(s) 430, 1094, 1208, 1678
FriOI GRGCYC 1 cut(s) 671
Fsp4HI GCNGC 7 cut(s) 762, 845, 855, 1010, 1065, 1456, 1866
FspBI CTAG 3 cut(s) 567, 893, 1992
GlaI GCGC 1 cut(s) 1192
GluI GCNGC 7 cut(s) 762, 845, 855, 1010, 1065, 1456, 1866
GsaI CCCAGC 1 cut(s) 1574
GsuI CTGGAG 1 cut(s) 2060
HaeIII GGCC 7 cut(s) 202, 272, 319, 847, 1455, 1601, 1836
HapII CCGG 2 cut(s) 273, 389
HhaI GCGC 1 cut(s) 1193
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 8 cut(s) 455, 461, 533, 881, 1071, 1736, 1825, 1918
Hin6I GCGC 1 cut(s) 1191
HinP1I GCGC 1 cut(s) 1191
HindIII AAGCTT 5 cut(s) 399, 434, 517, 616, 1302
HinfI GANTC 3 cut(s) 96, 724, 1246
HpaII CCGG 2 cut(s) 273, 389
HphI GGTGA 3 cut(s) 314, 322, 656
Hpy166II GTNNAC 5 cut(s) 207, 728, 781, 1319, 1650
Hpy188III TCNNGA 7 cut(s) 440, 509, 1043, 1359, 1381, 1423, 1972
Hpy8I GTNNAC 5 cut(s) 207, 728, 781, 1319, 1650
HpyAV CCTTC 5 cut(s) 510, 1058, 1632, 1760, 1796
HpyCH4III ACNGT 8 cut(s) 188, 211, 284, 346, 906, 1128, 1560, 1691
HpyCH4IV ACGT 4 cut(s) 20, 174, 1545, 1564
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 398, 593
HpyF3I CTNAG 5 cut(s) 520, 969, 1072, 1626, 2004
HpySE526I ACGT 4 cut(s) 20, 174, 1545, 1564
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 8 cut(s) 455, 461, 533, 881, 1071, 1736, 1825, 1918
HspAI GCGC 1 cut(s) 1191
KflI GGGWCCC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 2 cut(s) 1039, 1057
LmnI GCTCC 3 cut(s) 127, 373, 586
Lsp1109I GCAGC 3 cut(s) 841, 1051, 1852
LweI GCATC 3 cut(s) 1186, 1301, 1747
MaeI CTAG 3 cut(s) 567, 893, 1992
MaeII ACGT 4 cut(s) 20, 174, 1545, 1564
MaeIII GTNAC 8 cut(s) 21, 310, 555, 1085, 1144, 1554, 1560, 1565
MalI GATC 2 cut(s) 1041, 1059
MboI GATC 2 cut(s) 1039, 1057
MfeI CAATTG 2 cut(s) 868, 1369
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 3 cut(s) 124, 566, 671
MlsI TGGCCA 1 cut(s) 1601
MluCI AATT 8 cut(s) 820, 833, 868, 934, 1035, 1273, 1369, 1406
MluNI TGGCCA 1 cut(s) 1601
MlyI GAGTC 3 cut(s) 105, 733, 1255
MmeI TCCRAC 3 cut(s) 678, 958, 1059
Mox20I TGGCCA 1 cut(s) 1601
MroXI GAANNNNTTC 4 cut(s) 86, 1274, 1334, 1617
MscI TGGCCA 1 cut(s) 1601
MseI TTAA 9 cut(s) 324, 411, 614, 639, 720, 741, 786, 819, 1236
MslI CAYNNNNRTG 5 cut(s) 456, 1165, 1338, 1449, 1692
Msp20I TGGCCA 1 cut(s) 1601
MspA1I CMGCKG 1 cut(s) 679
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 2 cut(s) 273, 389
MspR9I CCNGG 4 cut(s) 222, 1053, 1122, 1531
MunI CAATTG 2 cut(s) 868, 1369
Mva1269I GAATGC 3 cut(s) 464, 959, 1993
MvaI CCWGG 4 cut(s) 222, 1053, 1122, 1531
MvnI CGCG 2 cut(s) 1191, 1193
MwoI GCNNNNNNNGC 3 cut(s) 11, 398, 593
NcoI CCATGG 2 cut(s) 1821, 1914
NdeII GATC 2 cut(s) 1039, 1057
NlaIII CATG 8 cut(s) 455, 461, 533, 881, 1071, 1736, 1825, 1918
NlaIV GGNNCC 4 cut(s) 147, 148, 582, 1059
NmuCI GTSAC 5 cut(s) 21, 310, 555, 1554, 1560
NspI RCATGY 3 cut(s) 461, 533, 1071
OliI CACNNNNGTG 2 cut(s) 1338, 1692
PaeI GCATGC 1 cut(s) 1071
PaqCI CACCTGC 1 cut(s) 298
PciI ACATGT 2 cut(s) 457, 529
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PctI GAATGC 3 cut(s) 464, 959, 1993
PdmI GAANNNNTTC 4 cut(s) 86, 1274, 1334, 1617
PfoI TCCNGGA 1 cut(s) 1120
PkrI GCNGC 7 cut(s) 763, 846, 856, 1011, 1066, 1457, 1867
PleI GAGTC 3 cut(s) 104, 732, 1254
PpsI GAGTC 3 cut(s) 104, 732, 1254
Ppu21I YACGTR 1 cut(s) 1565
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 457, 529
PshBI ATTAAT 2 cut(s) 324, 819
Psp1406I AACGTT 1 cut(s) 1545
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 4 cut(s) 220, 1051, 1120, 1529
PspFI CCCAGC 1 cut(s) 1570
PspGI CCWGG 4 cut(s) 220, 1051, 1120, 1529
PspN4I GGNNCC 4 cut(s) 147, 148, 582, 1059
PspPI GGNCC 3 cut(s) 146, 318, 928
PspPPI RGGWCCY 1 cut(s) 146
PstI CTGCAG 1 cut(s) 589
PstNI CAGNNNCTG 1 cut(s) 2038
PsuI RGATCY 1 cut(s) 1057
PvuII CAGCTG 1 cut(s) 679
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
RseI CAYNNNNRTG 5 cut(s) 456, 1165, 1338, 1449, 1692
SaqAI TTAA 9 cut(s) 324, 411, 614, 639, 720, 741, 786, 819, 1236
SatI GCNGC 7 cut(s) 762, 845, 855, 1010, 1065, 1456, 1866
Sau3AI GATC 2 cut(s) 1039, 1057
Sau96I GGNCC 3 cut(s) 146, 318, 928
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 3 cut(s) 105, 733, 1255
ScrFI CCNGG 4 cut(s) 222, 1053, 1122, 1531
SduI GDGCHC 3 cut(s) 124, 566, 671
SfaNI GCATC 3 cut(s) 1186, 1301, 1747
SfcI CTRYAG 1 cut(s) 585
SinI GGWCC 2 cut(s) 146, 928
SmiMI CAYNNNNRTG 5 cut(s) 456, 1165, 1338, 1449, 1692
SmlI CTYRAG 2 cut(s) 719, 1357
SmoI CTYRAG 2 cut(s) 719, 1357
SphI GCATGC 1 cut(s) 1071
Sse9I AATT 8 cut(s) 820, 833, 868, 934, 1035, 1273, 1369, 1406
SsiI CCGC 6 cut(s) 545, 761, 844, 1010, 1193, 1456
SspI AATATT 2 cut(s) 1462, 1639
SspMI CTAG 3 cut(s) 567, 893, 1992
StyD4I CCNGG 4 cut(s) 220, 1051, 1120, 1529
StyI CCWWGG 3 cut(s) 755, 1821, 1914
TaaI ACNGT 8 cut(s) 188, 211, 284, 346, 906, 1128, 1560, 1691
TaiI ACGT 4 cut(s) 23, 177, 1548, 1567
TaqI TCGA 2 cut(s) 131, 665
TaqII GACCGA 1 cut(s) 1516
TasI AATT 8 cut(s) 820, 833, 868, 934, 1035, 1273, 1369, 1406
TatI WGTACW 1 cut(s) 279
TauI GCSGC 4 cut(s) 764, 847, 1012, 1458
Tru1I TTAA 9 cut(s) 324, 411, 614, 639, 720, 741, 786, 819, 1236
Tru9I TTAA 9 cut(s) 324, 411, 614, 639, 720, 741, 786, 819, 1236
TscAI CASTG 4 cut(s) 147, 351, 1405, 1965
TseFI GTSAC 5 cut(s) 21, 310, 555, 1554, 1560
TseI GCWGC 3 cut(s) 854, 1064, 1865
Tsp45I GTSAC 5 cut(s) 21, 310, 555, 1554, 1560
TspDTI ATGAA 2 cut(s) 446, 468
TspGWI ACGGA 6 cut(s) 114, 386, 941, 1249, 1502, 1606
TspRI CASTG 4 cut(s) 147, 351, 1405, 1965
Vha464I CTTAAG 1 cut(s) 719
VpaK11BI GGWCC 2 cut(s) 146, 928
VspI ATTAAT 2 cut(s) 324, 819
XapI RAATTY 3 cut(s) 833, 934, 1273
XceI RCATGY 3 cut(s) 461, 533, 1071
XmiI GTMKAC 1 cut(s) 1649
XmnI GAANNNNTTC 4 cut(s) 86, 1274, 1334, 1617
XspI CTAG 3 cut(s) 567, 893, 1992
ZraI GACGTC 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.