Rroxscaffold_1G00042660

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0002054
Physical Location & Seq
Forward (+)
61004162 .. 61006404
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00042660.1

Sequence Viewer

Length: 2202 bp
ATGGCAAAGAGACCAGAAACATCACATTCTCATCGCATATACGAGGAACGAGAAGAGAAACTCGTGTCTTCAAAAGACGGGAAACAATTCAAAAGAGTCGCAAGGTTTCTCAAACCCTGTGCTCCGAATTCGAGCGAAGCAGTGGGACCCTCAAATACTCCATTGTTGTCTGACGTCTTTCCTCACAGTCTTCAACAATGGCCGTCCACGGTTGTGTTCCCAGGTTGCAAGAAGCCCCAGAAAAAATGGGTGGAGTGGATTGATAGGCTGGCCGGAAAGTACTGTACTATTTGGAACCAAGCTGGGATTTGCGATGCTATTATGAGCTCGAAATATGAGACCAACTTTAACAAGGATTTGGTGCTGGTTTTGGCTGAGTTTTGGTGCTCGGAGACTAATACGTTCGTGTTTGATTGGGGCGAAGCGACGATCACAATGGAGGATGTGATGGTTCTAGGTGGGTTTTCGGTTCTGGGTAAGCAGGTGACAAGGCCCATTAATGGGGTGTTGATGGACACAGTGGAGGAGATGGAGAAGAAGAAGACGGAGCTGACTAGAACTGCGGCGAGGAAAGCTTATCACTTAAACTGGATGACGCATTTTATGAAGCTTCAGGACTACAAGCATGAACATGTGGCATTCCTGTCTCTGTGGTTGGCAAGGTTCGTCTTTCCTTCTCTTCCTGAAGACAGCTTAGGCAAACATGTGTTTCCCATTGCTGTTCTTTTGTCACAGGGCACTAGAGTTACTCTGGCTCCTGCAGTTCTTGCAGGGCTTTTCAGAGATTTAAGCTTTTTGGAAAACCAAGCAATTAAGGGTGAGGAGATGATCTCTGTTTGGAGCCCATGTCAGCTGTTGCAGTTGTGGGCGTTGGAGAGGTTTCAGGGTGTGCTCAAGAGTCCACCAAAGAGACTGAACCCCGGTGAGCCTAGGGCGGCTCGGTGGAACAAAGTGAACATTAAGATTAGTCTTCCTGATGTGAGGAGAGAGGTTAACTTGGCTAAGAATTTTCGGTGGCGGCCTTATACTGCTGAGCTGACCAATTGGCTACATGGTTCTTACTACCAAGCTAAGGAACTGTGCTTTTATGATAAAACTACGGATCAGAATTTGCAGTCTTATGTTAAATGCTTGTGTTGTGCTGAGTTGGTTGGAGTAGAAGATTGTAAGGAGAAGTATTTGCCGCACAGGGTGGCAATGCAGTTTGGAATTGATCAAGACCTTATTCCTGGGGATCCTGTTGAACGCTCAGGGTTGGATTGTAACTCGGGCACTACCGATGTTCGTTTCTTTCTTCCAGGGCGGTTCTTTGGGCCGATCTGCGCGGATGCAATCAAAGATGATGTCAAAGTGGCTGAAAAAAAGATTAAGGAGAAGAGTCATCATCACTCCATGGAAGAGAAGAATTTGAAGGCGCATAAGGCATCTAGAAAAGCTTTATCGAAGTGTGAACTTGAAAAGAACCACTTCTGTGCTGTGCCTAAAGTCTCAAGAAAATCCAATTGTGCTGTCAGGACACAAGTCACACAACCATCAGCCACTGCTCAATTTCCCAAGAAGGTCAAGAAAGATTTGTCCCTAATTCATAGAGGTGGTGGCGATATTCCTCTGTTGAAACAAAGGGGACTTGTGGAAAAGAGACCGGCTTGTCTCCGCAATGCTTCGACAACCAGGAAATCCACAAAATATGTTTCCTCACGGTCACGTAACCCAAATGAAAATATGAAGAAACGGAAGCTGGCGACACCAACTGAAGAATTTCCTGCTAAGAAAAGAAATACTAGCGAGTATGGCAAAAATCTTTGGAGGGTTGCTACAAAAGGGACGAAGGATAGTGATATTGCAAATGTTCAAAGTAATGTCAGGATAACGCAAGAGCATCAAGTGAGAGCTAAAGTATCAGACAAAGGTTCTGCAAAAGGTGGGAAGAAAGCAATGGCTGACGGGTCTCTGAAGAAACCCATGGGGGTTGATGGCCATAAAGTGAAACAATCTGAAAGGTGTACTGCAAAAGGTGGGAAAAAAGCAATGGCTGAAAGGACTCTGAAGAAACCCATGGAGGCTGATGGTCATAAAGTGAAACAATCCAAAAGGGGTGCTGTGAAAGAAGTAAAGAGAACGATGGAGAATGCTAGAACGAGACCTCAGAAAGATGGATTACTGATGAGGGTTCAGAATCTGGAGAAAATTGTGGGGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

733

Amino Acids

83.0

Weight (kDa)

9.71

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 102 - 411 1.9e-84 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 472
AasI GACNNNNNNGTC 1 cut(s) 1647
AatII GACGTC 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 472
AccII CGCG 1 cut(s) 1325
AciI CCGC 7 cut(s) 563, 935, 1018, 1184, 1303, 1325, 1654
AclWI GGATC 3 cut(s) 1110, 1229, 1242
AcoI YGGCCR 3 cut(s) 200, 270, 1975
AcsI RAATTY 5 cut(s) 127, 1006, 1108, 1405, 1757
AcuI CTGAAG 5 cut(s) 596, 705, 1773, 1973, 2066
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 1192
AfaI GTAC 3 cut(s) 281, 286, 2005
AfiI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
AflIII ACRYGT 2 cut(s) 631, 703
AgsI TTSAA 8 cut(s) 72, 91, 194, 1244, 1411, 1457, 1615, 1853
AjnI CCWGG 4 cut(s) 220, 1228, 1297, 1670
AleI CACNNNNGTG 2 cut(s) 212, 1470
Alw21I GWGCWC 4 cut(s) 124, 329, 389, 894
AlwI GGATC 3 cut(s) 1110, 1229, 1242
AlwNI CAGNNNCTG 2 cut(s) 1541, 2179
Ama87I CYCGRG 1 cut(s) 1267
AoxI GGCC 6 cut(s) 200, 270, 491, 1019, 1313, 1975
ApoI RAATTY 5 cut(s) 127, 1006, 1108, 1405, 1757
ArsI GACNNNNNNTTYG 2 cut(s) 1329, 1361
AseI ATTAAT 1 cut(s) 498
Asp700I GAANNNNTTC 3 cut(s) 86, 1466, 1758
AspA2I CCTAGG 1 cut(s) 929
AspLEI GCGC 2 cut(s) 1325, 1417
AspS9I GGNCC 3 cut(s) 146, 492, 1313
AsuC2I CCSGG 1 cut(s) 921
AsuHPI GGTGA 3 cut(s) 496, 830, 935
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 1 cut(s) 146
AvrII CCTAGG 1 cut(s) 929
BaeGI GKGCMC 2 cut(s) 740, 1274
BalI TGGCCA 1 cut(s) 1977
BamHI GGATCC 1 cut(s) 1234
BanII GRGCYC 2 cut(s) 329, 845
BauI CACGAG 1 cut(s) 62
BbsI GAAGAC 5 cut(s) 60, 182, 548, 693, 962
Bbv12I GWGCWC 4 cut(s) 124, 329, 389, 894
BccI CCATC 8 cut(s) 442, 505, 523, 1540, 1967, 2060, 2116, 2147
BceAI ACGGC 1 cut(s) 187
BciT130I CCWGG 4 cut(s) 222, 1230, 1299, 1672
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 921
BfaI CTAG 7 cut(s) 455, 555, 741, 930, 1428, 1782, 2133
BfmI CTRYAG 1 cut(s) 759
BfuAI ACCTGC 1 cut(s) 472
BisI GCNGC 4 cut(s) 564, 936, 1019, 1184
BlnI CCTAGG 1 cut(s) 929
BlpI GCTNAGC 1 cut(s) 1032
BlsI GCNGC 4 cut(s) 565, 937, 1020, 1185
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 5 cut(s) 222, 921, 1230, 1299, 1672
Bme18I GGWCC 1 cut(s) 146
BmeT110I CYCGRG 1 cut(s) 1267
BmgT120I GGNCC 3 cut(s) 146, 492, 1313
BmiI GGNNCC 6 cut(s) 147, 148, 296, 756, 842, 1236
BmrFI CCNGG 5 cut(s) 222, 921, 1230, 1299, 1672
BmsI GCATC 4 cut(s) 304, 1318, 1433, 1888
BoxI GACNNNNGTC 1 cut(s) 1520
BpiI GAAGAC 5 cut(s) 60, 182, 548, 693, 962
BplI GAGNNNNNCTC 2 cut(s) 815, 847
BpmI CTGGAG 1 cut(s) 2201
Bpu10I CCTNAGC 3 cut(s) 694, 1071, 1249
Bpu1102I GCTNAGC 1 cut(s) 1032
BpuEI CTTGAG 2 cut(s) 878, 1474
BpuMI CCSGG 1 cut(s) 921
BsaAI YACGTR 1 cut(s) 1706
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 5 cut(s) 4, 332, 1633, 1953, 2134
BsaJI CCNNGG 9 cut(s) 207, 220, 919, 929, 1229, 1298, 1392, 1962, 2055
BsaXI ACNNNNNCTCC 4 cut(s) 739, 769, 832, 862
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 501, 1072
Bse118I RCCGGY 1 cut(s) 1642
Bse1I ACTGG 1 cut(s) 593
Bse3DI GCAATG 5 cut(s) 714, 1203, 1663, 1941, 2034
BseBI CCWGG 4 cut(s) 222, 1230, 1299, 1672
BseDI CCNNGG 9 cut(s) 207, 220, 919, 929, 1229, 1298, 1392, 1962, 2055
BseGI GGATG 3 cut(s) 448, 597, 1333
BseLI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
BseMI GCAATG 5 cut(s) 714, 1203, 1663, 1941, 2034
BseMII CTCAG 5 cut(s) 366, 1023, 1134, 1263, 2159
BseNI ACTGG 1 cut(s) 593
BseRI GAGGAG 3 cut(s) 539, 836, 997
BseSI GKGCMC 2 cut(s) 740, 1274
BseYI CCCAGC 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 1325
BshFI GGCC 6 cut(s) 202, 272, 493, 1021, 1315, 1977
BsiHKAI GWGCWC 4 cut(s) 124, 329, 389, 894
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 3 cut(s) 273, 921, 1643
BslFI GGGAC 4 cut(s) 159, 1561, 1638, 1837
BslI CCNNNNNNNGG 3 cut(s) 500, 501, 1072
BsmFI GGGAC 4 cut(s) 159, 1561, 1638, 1837
BsmI GAATGC 2 cut(s) 638, 2134
BsnI GGCC 6 cut(s) 202, 272, 493, 1021, 1315, 1977
Bso31I GGTCTC 5 cut(s) 4, 332, 1633, 1953, 2134
BsoBI CYCGRG 1 cut(s) 1267
Bsp1286I GDGCHC 7 cut(s) 124, 329, 389, 740, 845, 894, 1274
Bsp143I GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
Bsp1720I GCTNAGC 1 cut(s) 1032
Bsp19I CCATGG 3 cut(s) 1392, 1962, 2055
BspACI CCGC 7 cut(s) 563, 935, 1018, 1184, 1303, 1325, 1654
BspANI GGCC 6 cut(s) 202, 272, 493, 1021, 1315, 1977
BspCNI CTCAG 5 cut(s) 367, 1024, 1135, 1262, 2158
BspFNI CGCG 1 cut(s) 1325
BspLI GGNNCC 6 cut(s) 147, 148, 296, 756, 842, 1236
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 3 cut(s) 1110, 1229, 1242
BspTNI GGTCTC 5 cut(s) 4, 332, 1633, 1953, 2134
BsrDI GCAATG 5 cut(s) 714, 1203, 1663, 1941, 2034
BsrFI RCCGGY 1 cut(s) 1642
BsrI ACTGG 1 cut(s) 593
BssAI RCCGGY 1 cut(s) 1642
BssECI CCNNGG 9 cut(s) 207, 220, 919, 929, 1229, 1298, 1392, 1962, 2055
BssMI GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 62
BssT1I CCWWGG 4 cut(s) 929, 1392, 1962, 2055
Bst2BI CACGAG 1 cut(s) 62
Bst2UI CCWGG 4 cut(s) 222, 1230, 1299, 1672
Bst4CI ACNGT 6 cut(s) 188, 211, 284, 520, 1080, 1701
Bst6I CTCTTC 4 cut(s) 48, 684, 1370, 1392
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 767
BstBAI YACGTR 1 cut(s) 1706
BstC8I GCNNGC 2 cut(s) 270, 1740
BstDEI CTNAG 9 cut(s) 375, 694, 1002, 1032, 1071, 1143, 1249, 1767, 2145
BstDSI CCRYGG 4 cut(s) 207, 1392, 1962, 2055
BstF5I GGATG 3 cut(s) 448, 597, 1333
BstFNI CGCG 1 cut(s) 1325
BstHHI GCGC 2 cut(s) 1325, 1417
BstKTI GATC 6 cut(s) 432, 831, 1105, 1216, 1237, 1320
BstMBI GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
BstMWI GCNNNNNNNGC 4 cut(s) 572, 767, 1421, 1791
BstNI CCWGG 4 cut(s) 222, 1230, 1299, 1672
BstNSI RCATGY 2 cut(s) 635, 707
BstPAI GACNNNNGTC 1 cut(s) 1520
BstSCI CCNGG 5 cut(s) 220, 919, 1228, 1297, 1670
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 2 cut(s) 740, 1274
BstUI CGCG 1 cut(s) 1325
BstV2I GAAGAC 5 cut(s) 60, 182, 548, 693, 962
BstX2I RGATCY 1 cut(s) 1234
BstYI RGATCY 1 cut(s) 1234
BsuRI GGCC 6 cut(s) 202, 272, 493, 1021, 1315, 1977
BtgI CCRYGG 4 cut(s) 207, 1392, 1962, 2055
BtgZI GCGATG 2 cut(s) 17, 327
BtsCI GGATG 3 cut(s) 448, 597, 1333
BtsI GCAGTG 2 cut(s) 147, 1539
BtsIMutI CAGTG 3 cut(s) 147, 525, 1539
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 2 cut(s) 270, 1740
CaiI CAGNNNCTG 2 cut(s) 1541, 2179
CfoI GCGC 2 cut(s) 1325, 1417
Cfr10I RCCGGY 1 cut(s) 1642
Cfr13I GGNCC 3 cut(s) 146, 492, 1313
CseI GACGC 1 cut(s) 604
Csp6I GTAC 3 cut(s) 280, 285, 2004
CviAII CATG 8 cut(s) 626, 632, 704, 846, 1052, 1393, 1963, 2056
CviQI GTAC 3 cut(s) 280, 285, 2004
DdeI CTNAG 9 cut(s) 375, 694, 1002, 1032, 1071, 1143, 1249, 1767, 2145
DpnI GATC 6 cut(s) 431, 830, 1104, 1215, 1236, 1319
DpnII GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
DraIII CACNNNGTG 1 cut(s) 1192
DrdI GACNNNNNNGTC 1 cut(s) 1647
DseDI GACNNNNNNGTC 1 cut(s) 1647
EaeI YGGCCR 3 cut(s) 200, 270, 1975
Eam1104I CTCTTC 4 cut(s) 48, 684, 1370, 1392
EarI CTCTTC 4 cut(s) 48, 684, 1370, 1392
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 4 cut(s) 929, 1392, 1962, 2055
Eco24I GRGCYC 2 cut(s) 329, 845
Eco31I GGTCTC 5 cut(s) 4, 332, 1633, 1953, 2134
Eco47I GGWCC 1 cut(s) 146
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 5 cut(s) 596, 705, 1773, 1973, 2066
Eco88I CYCGRG 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 4 cut(s) 220, 1228, 1297, 1670
EcoT14I CCWWGG 4 cut(s) 929, 1392, 1962, 2055
EcoT38I GRGCYC 2 cut(s) 329, 845
ErhI CCWWGG 4 cut(s) 929, 1392, 1962, 2055
FaeI CATG 8 cut(s) 629, 635, 707, 849, 1055, 1396, 1966, 2059
FalI AAGNNNNNCTT 2 cut(s) 1451, 1483
FaqI GGGAC 4 cut(s) 159, 1561, 1638, 1837
FatI CATG 8 cut(s) 625, 631, 703, 845, 1051, 1392, 1962, 2055
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 4 cut(s) 564, 936, 1019, 1184
FokI GGATG 3 cut(s) 455, 604, 1340
FriOI GRGCYC 2 cut(s) 329, 845
Fsp4HI GCNGC 4 cut(s) 564, 936, 1019, 1184
FspBI CTAG 7 cut(s) 455, 555, 741, 930, 1428, 1782, 2133
GlaI GCGC 2 cut(s) 1324, 1416
GluI GCNGC 4 cut(s) 564, 936, 1019, 1184
GsaI CCCAGC 1 cut(s) 306
GsuI CTGGAG 1 cut(s) 2201
HaeIII GGCC 6 cut(s) 202, 272, 493, 1021, 1315, 1977
HapII CCGG 3 cut(s) 273, 921, 1643
HgaI GACGC 1 cut(s) 604
HhaI GCGC 2 cut(s) 1325, 1417
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 8 cut(s) 629, 635, 707, 849, 1055, 1396, 1966, 2059
Hin6I GCGC 2 cut(s) 1323, 1415
HinP1I GCGC 2 cut(s) 1323, 1415
HincII GTYRAC 1 cut(s) 994
HindII GTYRAC 1 cut(s) 994
HindIII AAGCTT 4 cut(s) 573, 608, 790, 1434
HinfI GANTC 5 cut(s) 96, 898, 1378, 2041, 2176
HpaI GTTAAC 1 cut(s) 994
HpaII CCGG 3 cut(s) 273, 921, 1643
HphI GGTGA 3 cut(s) 496, 830, 935
Hpy166II GTNNAC 6 cut(s) 207, 902, 955, 994, 1451, 2004
Hpy8I GTNNAC 6 cut(s) 207, 902, 955, 994, 1451, 2004
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 4 cut(s) 684, 1405, 1552, 1822
HpyCH4III ACNGT 6 cut(s) 188, 211, 284, 520, 1080, 1701
HpyCH4IV ACGT 3 cut(s) 174, 401, 1705
HpyF10VI GCNNNNNNNGC 4 cut(s) 572, 767, 1421, 1791
HpyF3I CTNAG 9 cut(s) 375, 694, 1002, 1032, 1071, 1143, 1249, 1767, 2145
HpySE526I ACGT 3 cut(s) 174, 401, 1705
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 8 cut(s) 629, 635, 707, 849, 1055, 1396, 1966, 2059
HspAI GCGC 2 cut(s) 1323, 1415
KflI GGGWCCC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 1213
KspAI GTTAAC 1 cut(s) 994
Kzo9I GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
LmnI GCTCC 4 cut(s) 127, 547, 760, 840
LweI GCATC 4 cut(s) 304, 1318, 1433, 1888
MaeI CTAG 7 cut(s) 455, 555, 741, 930, 1428, 1782, 2133
MaeII ACGT 3 cut(s) 174, 401, 1705
MaeIII GTNAC 7 cut(s) 484, 729, 745, 1262, 1522, 1701, 1706
MalI GATC 6 cut(s) 431, 830, 1104, 1215, 1236, 1319
MboI GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
MfeI CAATTG 2 cut(s) 1042, 1501
MflI RGATCY 1 cut(s) 1234
MhlI GDGCHC 7 cut(s) 124, 329, 389, 740, 845, 894, 1274
MlsI TGGCCA 1 cut(s) 1977
MluNI TGGCCA 1 cut(s) 1977
MlyI GAGTC 4 cut(s) 105, 907, 1387, 2035
MmeI TCCRAC 3 cut(s) 852, 1132, 1236
Mox20I TGGCCA 1 cut(s) 1977
MroXI GAANNNNTTC 3 cut(s) 86, 1466, 1758
MscI TGGCCA 1 cut(s) 1977
MseI TTAA 9 cut(s) 348, 498, 584, 788, 813, 960, 993, 1125, 1368
MslI CAYNNNNRTG 4 cut(s) 212, 630, 1470, 1590
Msp20I TGGCCA 1 cut(s) 1977
MspA1I CMGCKG 1 cut(s) 853
MspI CCGG 3 cut(s) 273, 921, 1643
MspR9I CCNGG 5 cut(s) 222, 921, 1230, 1299, 1672
MunI CAATTG 2 cut(s) 1042, 1501
Mva1269I GAATGC 2 cut(s) 638, 2134
MvaI CCWGG 4 cut(s) 222, 1230, 1299, 1672
MvnI CGCG 1 cut(s) 1325
MwoI GCNNNNNNNGC 4 cut(s) 572, 767, 1421, 1791
NciI CCSGG 1 cut(s) 921
NcoI CCATGG 3 cut(s) 1392, 1962, 2055
NdeII GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
NlaIII CATG 8 cut(s) 629, 635, 707, 849, 1055, 1396, 1966, 2059
NlaIV GGNNCC 6 cut(s) 147, 148, 296, 756, 842, 1236
NmuCI GTSAC 4 cut(s) 484, 729, 1522, 1701
NspI RCATGY 2 cut(s) 635, 707
OliI CACNNNNGTG 2 cut(s) 212, 1470
PaqCI CACCTGC 1 cut(s) 472
PciI ACATGT 2 cut(s) 631, 703
PctI GAATGC 2 cut(s) 638, 2134
PdmI GAANNNNTTC 3 cut(s) 86, 1466, 1758
PfeI GAWTC 1 cut(s) 2176
PkrI GCNGC 4 cut(s) 565, 937, 1020, 1185
PleI GAGTC 4 cut(s) 104, 906, 1386, 2035
PpsI GAGTC 4 cut(s) 104, 906, 1386, 2035
Ppu21I YACGTR 1 cut(s) 1706
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 631, 703
PshAI GACNNNNGTC 1 cut(s) 1520
PshBI ATTAAT 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 4 cut(s) 220, 1228, 1297, 1670
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 4 cut(s) 220, 1228, 1297, 1670
PspN4I GGNNCC 6 cut(s) 147, 148, 296, 756, 842, 1236
PspPI GGNCC 3 cut(s) 146, 492, 1313
PspPPI RGGWCCY 1 cut(s) 146
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 2 cut(s) 1541, 2179
PsuI RGATCY 1 cut(s) 1234
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 3 cut(s) 281, 286, 2005
RsaNI GTAC 3 cut(s) 280, 285, 2004
RseI CAYNNNNRTG 4 cut(s) 212, 630, 1470, 1590
SacI GAGCTC 1 cut(s) 329
SaqAI TTAA 9 cut(s) 348, 498, 584, 788, 813, 960, 993, 1125, 1368
SatI GCNGC 4 cut(s) 564, 936, 1019, 1184
Sau3AI GATC 6 cut(s) 429, 828, 1102, 1213, 1234, 1317
Sau96I GGNCC 3 cut(s) 146, 492, 1313
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 4 cut(s) 105, 907, 1387, 2035
ScrFI CCNGG 5 cut(s) 222, 921, 1230, 1299, 1672
SduI GDGCHC 7 cut(s) 124, 329, 389, 740, 845, 894, 1274
SfaNI GCATC 4 cut(s) 304, 1318, 1433, 1888
SfcI CTRYAG 1 cut(s) 759
SinI GGWCC 1 cut(s) 146
SmiMI CAYNNNNRTG 4 cut(s) 212, 630, 1470, 1590
SmlI CTYRAG 2 cut(s) 893, 1489
SmoI CTYRAG 2 cut(s) 893, 1489
SsiI CCGC 7 cut(s) 563, 935, 1018, 1184, 1303, 1325, 1654
SspMI CTAG 7 cut(s) 455, 555, 741, 930, 1428, 1782, 2133
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 5 cut(s) 220, 919, 1228, 1297, 1670
StyI CCWWGG 4 cut(s) 929, 1392, 1962, 2055
TaaI ACNGT 6 cut(s) 188, 211, 284, 520, 1080, 1701
TaiI ACGT 3 cut(s) 177, 404, 1708
TaqI TCGA 4 cut(s) 131, 329, 1442, 1664
TatI WGTACW 3 cut(s) 279, 284, 2003
TauI GCSGC 4 cut(s) 566, 938, 1021, 1186
TfiI GAWTC 1 cut(s) 2176
Tru1I TTAA 9 cut(s) 348, 498, 584, 788, 813, 960, 993, 1125, 1368
Tru9I TTAA 9 cut(s) 348, 498, 584, 788, 813, 960, 993, 1125, 1368
TscAI CASTG 3 cut(s) 147, 525, 1546
TseFI GTSAC 4 cut(s) 484, 729, 1522, 1701
Tsp45I GTSAC 4 cut(s) 484, 729, 1522, 1701
TspDTI ATGAA 5 cut(s) 620, 642, 1574, 1731, 1739
TspGWI ACGGA 3 cut(s) 560, 1115, 1747
TspRI CASTG 3 cut(s) 147, 525, 1546
VpaK11BI GGWCC 1 cut(s) 146
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 5 cut(s) 127, 1006, 1108, 1405, 1757
XbaI TCTAGA 1 cut(s) 1427
XceI RCATGY 2 cut(s) 635, 707
XmaJI CCTAGG 1 cut(s) 929
XmnI GAANNNNTTC 3 cut(s) 86, 1466, 1758
XspI CTAG 7 cut(s) 455, 555, 741, 930, 1428, 1782, 2133
ZraI GACGTC 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.