Rh5BG263800

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0002054
Physical Location & Seq
Reverse (-)
33027973 .. 33029663
1691 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG263800.1

Sequence Viewer

Length: 1662 bp
ATGGCGAAGAGAGAAGAAACGTCACATCCTCATCGCATATACGAGGAACGAGAAGAGAAACTTGTATCTTCAAAAGACGGGAAGCAGTTCAGAAGAGTCGCAAGGTTTCTCAAACCCTGTGCTCCGAATTCGAGCAAAGCAGTGGGACCCTCAAATACTCCATTGTTGTCTGACGTCTTTCCTCAAAGTCTTCAACAATGGCCGTCCACGGTTGTGTTCCCGGGTTGCAAGAAGCCCCAGAAAAAATGGGTGGAGTGGATTGATAGGCTGGCCAGAAAGTACTGTACTATTTGGAACCAAGCTGGGATTTGCGATGCTATTATGAGCTCGAAGTATGAGACTAAATTTAACAAGGATTTGGTGCTGGTTTTGGCCGAGTTTTGGTGCTCGGAGACTAATACATTCGTGTTTGATTGGGGCGAAGCGACGATCACAATGGAGGATGTGATGATTCTTGGTGGGTTTTCGGTTCTGGGTTTTCAGGTGACGAGGCCCATTAATGGGGTGTTGGTGGAAACAGTGGAGGAGATGGAGAAGAAGAAGACGGAGCTGACGAGAACTCCGGCGAAGAAAGCTTATCACTTTAACTGGATGACCCATTTTATGAAGCTTCAGGACTACAAGCATGAACATGTGGCATTCCTGTCTCTGTGGTTGGCAAGGTTTGTATTTCCTTCTCTTCCTGAAGAAAGCTTAGGCAAACATGTGTTTCCCATTGCGGTTCTTTTGTCACAGGGCGCTAGAGTTGCTCTGGCTCCTGCAGTTCTTGCAGGGCTTTTCAGAGATTTAAGCTTTTTGAAAAACCAAGCCTTTAAGGGTGAGGAGATAATCTCTGTTTCGAGCCCATTTCAGCTGTTGCAGTTGTGGGCGTTGGAGAGGTTTCAGGGTGTGCTTAATAGTCCACCAAAGAGACTTAACCCCTATGAGCCTAGGGCGGCTCGGTGGAACAAAGTGAACATTAAGATTAGTCTCCCTGATGTGAGGAGAGAGATTAATTTGGCTAAGAATTTTTGGTGGCGGCCTTATGCTGCTGAACTGACCAATTGGCGACATGGTTCTTACTACCTAGCTGATAAACTGTGCTTTTATGATAAAACTACGGACCAGAATATGCAGTCTTATGTTGAATGCTTGTGTTGTGCTGAGTTGGTTGGAGTAGAAGATTGTAAGGAGAAGTATTTGCCGCACAGGGTGGCAATGCAGTTTGGAATTGATCAAGACCTTCCTGGGGATCCTACTGCATGCTCAGGGTTGGATGGTAACTCAGACACTACCGATGTTCGTTTCTTTCTTCCAGGATTGTTTTTTGAGCCGTGTGTAACTGCTAGATACTCATATTGGTGGGGACTATATAAGTCTGCTCGCGCAGATGCAATCAAAGATGGTGTCAAAGTGGCTGTAAAAAAGATTAAGGAGAAGAGTCATCATCACTCCGTGGAAGAGAAGAATTTCAAGGCGCATAAGGCATCTACAAAAGCTTTATCAAAGTGTGAACTTGAAAAGAACCACTTCTGTGCTGAGCCTGAAGTCTCAAGAAAATCCAATTGTGCTGTCAGGACACAACCATCAGCCACTGCTCAATTTCCCAAGAAGTGGTTGTGGCGATATTCCTCTGTTGAAACAAAGGGGACTTGTGGAAAAGAGACCGGCTTGTCTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

553

Amino Acids

63.34

Weight (kDa)

9.04

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 102 - 412 4.2e-84 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1651
AatII GACGTC 1 cut(s) 177
AccB7I CCANNNNNTGG 1 cut(s) 1593
AccII CGCG 1 cut(s) 1365
AciI CCGC 4 cut(s) 719, 935, 1018, 1184
AclWI GGATC 2 cut(s) 1226, 1239
AcoI YGGCCR 3 cut(s) 200, 270, 372
AcsI RAATTY 4 cut(s) 127, 344, 1006, 1447
AcuI CTGAAG 3 cut(s) 596, 705, 1545
AcyI GRCGYC 1 cut(s) 174
AdeI CACNNNGTG 2 cut(s) 1192, 1435
AfaI GTAC 2 cut(s) 281, 286
AfiI CCNNNNNNNGG 5 cut(s) 381, 500, 501, 1228, 1593
AflIII ACRYGT 2 cut(s) 631, 703
AgsI TTSAA 7 cut(s) 72, 194, 799, 1127, 1453, 1499, 1619
AjnI CCWGG 2 cut(s) 1225, 1294
AleI CACNNNNGTG 2 cut(s) 212, 1512
Alw21I GWGCWC 3 cut(s) 124, 329, 389
Alw26I GTCTC 7 cut(s) 332, 386, 651, 904, 974, 1534, 1637
AlwI GGATC 2 cut(s) 1226, 1239
AlwNI CAGNNNCTG 1 cut(s) 1574
Ama87I CYCGRG 1 cut(s) 220
AoxI GGCC 5 cut(s) 200, 270, 372, 491, 1019
ApeKI GCWGC 1 cut(s) 1028
ApoI RAATTY 4 cut(s) 127, 344, 1006, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 1371, 1403
AseI ATTAAT 2 cut(s) 498, 993
Asp700I GAANNNNTTC 3 cut(s) 86, 1448, 1508
AspA2I CCTAGG 1 cut(s) 929
AspLEI GCGC 3 cut(s) 740, 1367, 1459
AspS9I GGNCC 3 cut(s) 146, 492, 1102
AsuC2I CCSGG 2 cut(s) 221, 222
AsuHPI GGTGA 2 cut(s) 496, 830
AvaI CYCGRG 1 cut(s) 220
AvaII GGWCC 2 cut(s) 146, 1102
AvrII CCTAGG 1 cut(s) 929
BalI TGGCCA 1 cut(s) 272
BamHI GGATCC 1 cut(s) 1231
BanII GRGCYC 2 cut(s) 329, 845
BbsI GAAGAC 2 cut(s) 182, 548
Bbv12I GWGCWC 3 cut(s) 124, 329, 389
BbvI GCAGC 1 cut(s) 1015
BccI CCATC 4 cut(s) 523, 1250, 1376, 1573
BceAI ACGGC 2 cut(s) 187, 1297
BciT130I CCWGG 2 cut(s) 1227, 1296
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 2 cut(s) 221, 222
BcoDI GTCTC 7 cut(s) 332, 386, 651, 904, 974, 1534, 1637
BfaI CTAG 4 cut(s) 741, 930, 1067, 1326
BfmI CTRYAG 1 cut(s) 759
BfoI RGCGCY 1 cut(s) 741
BisI GCNGC 4 cut(s) 936, 1019, 1029, 1184
BlnI CCTAGG 1 cut(s) 929
BlpI GCTNAGC 1 cut(s) 1518
BlsI GCNGC 4 cut(s) 937, 1020, 1030, 1185
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 4 cut(s) 221, 222, 1227, 1296
Bme18I GGWCC 2 cut(s) 146, 1102
BmeT110I CYCGRG 1 cut(s) 220
BmgT120I GGNCC 3 cut(s) 146, 492, 1102
BmiI GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
BmrFI CCNGG 4 cut(s) 221, 222, 1227, 1296
BmsI GCATC 3 cut(s) 304, 1360, 1475
BpiI GAAGAC 2 cut(s) 182, 548
BplI GAGNNNNNCTC 2 cut(s) 815, 847
Bpu10I CCTNAGC 2 cut(s) 694, 1246
Bpu1102I GCTNAGC 1 cut(s) 1518
BpuEI CTTGAG 1 cut(s) 1516
BpuMI CCSGG 2 cut(s) 221, 222
BsaHI GRCGYC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 1637
BsaJI CCNNGG 5 cut(s) 207, 220, 929, 1226, 1434
BsaXI ACNNNNNCTCC 2 cut(s) 544, 574
Bsc4I CCNNNNNNNGG 5 cut(s) 381, 500, 501, 1228, 1593
Bse118I RCCGGY 1 cut(s) 1646
Bse1I ACTGG 1 cut(s) 593
Bse3DI GCAATG 2 cut(s) 714, 1203
BseBI CCWGG 2 cut(s) 1227, 1296
BseDI CCNNGG 5 cut(s) 207, 220, 929, 1226, 1434
BseGI GGATG 4 cut(s) 25, 448, 597, 1261
BseLI CCNNNNNNNGG 5 cut(s) 381, 500, 501, 1228, 1593
BseMI GCAATG 2 cut(s) 714, 1203
BseMII CTCAG 4 cut(s) 1134, 1260, 1278, 1509
BseNI ACTGG 1 cut(s) 593
BseRI GAGGAG 3 cut(s) 539, 836, 997
BseXI GCAGC 1 cut(s) 1015
BseYI CCCAGC 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 1365
BshFI GGCC 5 cut(s) 202, 272, 374, 493, 1021
BsiHKAI GWGCWC 3 cut(s) 124, 329, 389
BsiHKCI CYCGRG 1 cut(s) 220
BsiSI CCGG 3 cut(s) 221, 563, 1647
BslFI GGGAC 3 cut(s) 159, 1359, 1642
BslI CCNNNNNNNGG 5 cut(s) 381, 500, 501, 1228, 1593
BsmAI GTCTC 7 cut(s) 332, 386, 651, 904, 974, 1534, 1637
BsmFI GGGAC 3 cut(s) 159, 1359, 1642
BsmI GAATGC 2 cut(s) 638, 1133
BsnI GGCC 5 cut(s) 202, 272, 374, 493, 1021
Bso31I GGTCTC 1 cut(s) 1637
BsoBI CYCGRG 1 cut(s) 220
Bsp1286I GDGCHC 4 cut(s) 124, 329, 389, 845
Bsp143I GATC 3 cut(s) 429, 1213, 1231
Bsp1720I GCTNAGC 1 cut(s) 1518
BspACI CCGC 4 cut(s) 719, 935, 1018, 1184
BspANI GGCC 5 cut(s) 202, 272, 374, 493, 1021
BspCNI CTCAG 4 cut(s) 1135, 1259, 1277, 1510
BspFNI CGCG 1 cut(s) 1365
BspLI GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
BspMAI CTGCAG 1 cut(s) 763
BspPI GGATC 2 cut(s) 1226, 1239
BspTNI GGTCTC 1 cut(s) 1637
BsrDI GCAATG 2 cut(s) 714, 1203
BsrFI RCCGGY 1 cut(s) 1646
BsrI ACTGG 1 cut(s) 593
BssAI RCCGGY 1 cut(s) 1646
BssECI CCNNGG 5 cut(s) 207, 220, 929, 1226, 1434
BssMI GATC 3 cut(s) 429, 1213, 1231
BssNI GRCGYC 1 cut(s) 174
BssT1I CCWWGG 1 cut(s) 929
Bst2UI CCWGG 2 cut(s) 1227, 1296
Bst4CI ACNGT 4 cut(s) 211, 284, 520, 1080
Bst6I CTCTTC 6 cut(s) 2, 48, 88, 684, 1412, 1434
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 767
BstC8I GCNNGC 3 cut(s) 270, 1243, 1363
BstDEI CTNAG 6 cut(s) 694, 1002, 1143, 1246, 1264, 1518
BstDSI CCRYGG 2 cut(s) 207, 1434
BstF5I GGATG 4 cut(s) 25, 448, 597, 1261
BstFNI CGCG 1 cut(s) 1365
BstH2I RGCGCY 1 cut(s) 741
BstHHI GCGC 3 cut(s) 740, 1367, 1459
BstKTI GATC 3 cut(s) 432, 1216, 1234
BstMAI GTCTC 7 cut(s) 332, 386, 651, 904, 974, 1534, 1637
BstMBI GATC 3 cut(s) 429, 1213, 1231
BstMWI GCNNNNNNNGC 4 cut(s) 572, 746, 767, 1463
BstNI CCWGG 2 cut(s) 1227, 1296
BstNSI RCATGY 3 cut(s) 635, 707, 1245
BstSCI CCNGG 4 cut(s) 219, 220, 1225, 1294
BstSFI CTRYAG 1 cut(s) 759
BstUI CGCG 1 cut(s) 1365
BstV1I GCAGC 1 cut(s) 1015
BstV2I GAAGAC 2 cut(s) 182, 548
BstX2I RGATCY 1 cut(s) 1231
BstYI RGATCY 1 cut(s) 1231
BsuRI GGCC 5 cut(s) 202, 272, 374, 493, 1021
BtgI CCRYGG 2 cut(s) 207, 1434
BtgZI GCGATG 2 cut(s) 17, 327
BtsCI GGATG 4 cut(s) 25, 448, 597, 1261
BtsI GCAGTG 2 cut(s) 147, 1572
BtsIMutI CAGTG 3 cut(s) 147, 525, 1572
Cac8I GCNNGC 3 cut(s) 270, 1243, 1363
CaiI CAGNNNCTG 1 cut(s) 1574
CfoI GCGC 3 cut(s) 740, 1367, 1459
Cfr10I RCCGGY 1 cut(s) 1646
Cfr13I GGNCC 3 cut(s) 146, 492, 1102
Cfr9I CCCGGG 1 cut(s) 220
Csp6I GTAC 2 cut(s) 280, 285
CviAII CATG 5 cut(s) 626, 632, 704, 1052, 1242
CviQI GTAC 2 cut(s) 280, 285
DdeI CTNAG 6 cut(s) 694, 1002, 1143, 1246, 1264, 1518
DpnI GATC 3 cut(s) 431, 1215, 1233
DpnII GATC 3 cut(s) 429, 1213, 1231
DraIII CACNNNGTG 2 cut(s) 1192, 1435
DrdI GACNNNNNNGTC 1 cut(s) 1651
DseDI GACNNNNNNGTC 1 cut(s) 1651
EaeI YGGCCR 3 cut(s) 200, 270, 372
Eam1104I CTCTTC 6 cut(s) 2, 48, 88, 684, 1412, 1434
EarI CTCTTC 6 cut(s) 2, 48, 88, 684, 1412, 1434
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 1 cut(s) 929
Eco24I GRGCYC 2 cut(s) 329, 845
Eco31I GGTCTC 1 cut(s) 1637
Eco47I GGWCC 2 cut(s) 146, 1102
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 3 cut(s) 596, 705, 1545
Eco88I CYCGRG 1 cut(s) 220
EcoICRI GAGCTC 1 cut(s) 327
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 1225, 1294
EcoT14I CCWWGG 1 cut(s) 929
EcoT38I GRGCYC 2 cut(s) 329, 845
ErhI CCWWGG 1 cut(s) 929
FaeI CATG 5 cut(s) 629, 635, 707, 1055, 1245
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 1493, 1525
FaqI GGGAC 3 cut(s) 159, 1359, 1642
FatI CATG 5 cut(s) 625, 631, 703, 1051, 1241
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 4 cut(s) 936, 1019, 1029, 1184
FokI GGATG 4 cut(s) 12, 455, 604, 1268
FriOI GRGCYC 2 cut(s) 329, 845
Fsp4HI GCNGC 4 cut(s) 936, 1019, 1029, 1184
FspBI CTAG 4 cut(s) 741, 930, 1067, 1326
GlaI GCGC 3 cut(s) 739, 1366, 1458
GluI GCNGC 4 cut(s) 936, 1019, 1029, 1184
GsaI CCCAGC 1 cut(s) 306
HaeII RGCGCY 1 cut(s) 741
HaeIII GGCC 5 cut(s) 202, 272, 374, 493, 1021
HapII CCGG 3 cut(s) 221, 563, 1647
HhaI GCGC 3 cut(s) 740, 1367, 1459
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 5 cut(s) 629, 635, 707, 1055, 1245
Hin6I GCGC 3 cut(s) 738, 1365, 1457
HinP1I GCGC 3 cut(s) 738, 1365, 1457
HindIII AAGCTT 5 cut(s) 573, 608, 691, 790, 1476
HinfI GANTC 3 cut(s) 96, 451, 1420
HpaII CCGG 3 cut(s) 221, 563, 1647
HphI GGTGA 2 cut(s) 496, 830
Hpy166II GTNNAC 4 cut(s) 207, 902, 955, 1493
Hpy188I TCNGA 6 cut(s) 92, 126, 172, 391, 782, 1267
Hpy188III TCNNGA 5 cut(s) 614, 683, 1217, 1533, 1555
Hpy8I GTNNAC 4 cut(s) 207, 902, 955, 1493
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 2 cut(s) 684, 1232
HpyCH4III ACNGT 4 cut(s) 211, 284, 520, 1080
HpyCH4IV ACGT 2 cut(s) 20, 174
HpyCH4V TGCA 8 cut(s) 228, 761, 770, 859, 1114, 1201, 1241, 1373
HpyF10VI GCNNNNNNNGC 4 cut(s) 572, 746, 767, 1463
HpyF3I CTNAG 6 cut(s) 694, 1002, 1143, 1246, 1264, 1518
HpySE526I ACGT 2 cut(s) 20, 174
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 5 cut(s) 629, 635, 707, 1055, 1245
HspAI GCGC 3 cut(s) 738, 1365, 1457
KflI GGGWCCC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 3 cut(s) 429, 1213, 1231
LmnI GCTCC 3 cut(s) 127, 547, 760
Lsp1109I GCAGC 1 cut(s) 1015
LweI GCATC 3 cut(s) 304, 1360, 1475
MaeI CTAG 4 cut(s) 741, 930, 1067, 1326
MaeII ACGT 2 cut(s) 20, 174
MaeIII GTNAC 5 cut(s) 21, 484, 729, 1259, 1318
MalI GATC 3 cut(s) 431, 1215, 1233
MboI GATC 3 cut(s) 429, 1213, 1231
MfeI CAATTG 2 cut(s) 1042, 1543
MflI RGATCY 1 cut(s) 1231
MhlI GDGCHC 4 cut(s) 124, 329, 389, 845
MlsI TGGCCA 1 cut(s) 272
MluCI AATT 9 cut(s) 127, 344, 994, 1006, 1042, 1209, 1447, 1543, 1580
MluNI TGGCCA 1 cut(s) 272
MlyI GAGTC 2 cut(s) 105, 1429
MmeI TCCRAC 3 cut(s) 852, 1132, 1233
Mox20I TGGCCA 1 cut(s) 272
MroXI GAANNNNTTC 3 cut(s) 86, 1448, 1508
MscI TGGCCA 1 cut(s) 272
MslI CAYNNNNRTG 4 cut(s) 212, 630, 1339, 1512
Msp20I TGGCCA 1 cut(s) 272
MspA1I CMGCKG 1 cut(s) 853
MspI CCGG 3 cut(s) 221, 563, 1647
MspR9I CCNGG 4 cut(s) 221, 222, 1227, 1296
MunI CAATTG 2 cut(s) 1042, 1543
Mva1269I GAATGC 2 cut(s) 638, 1133
MvaI CCWGG 2 cut(s) 1227, 1296
MvnI CGCG 1 cut(s) 1365
MwoI GCNNNNNNNGC 4 cut(s) 572, 746, 767, 1463
NciI CCSGG 2 cut(s) 221, 222
NdeII GATC 3 cut(s) 429, 1213, 1231
NlaIII CATG 5 cut(s) 629, 635, 707, 1055, 1245
NlaIV GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 3 cut(s) 21, 484, 729
NspI RCATGY 3 cut(s) 635, 707, 1245
OliI CACNNNNGTG 2 cut(s) 212, 1512
PaeI GCATGC 1 cut(s) 1245
PciI ACATGT 2 cut(s) 631, 703
PcsI WCGNNNNNNNCGW 1 cut(s) 551
PctI GAATGC 2 cut(s) 638, 1133
PdmI GAANNNNTTC 3 cut(s) 86, 1448, 1508
PfeI GAWTC 1 cut(s) 451
PflMI CCANNNNNTGG 1 cut(s) 1593
PfoI TCCNGGA 1 cut(s) 1294
PkrI GCNGC 4 cut(s) 937, 1020, 1030, 1185
PleI GAGTC 2 cut(s) 104, 1428
PpsI GAGTC 2 cut(s) 104, 1428
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 631, 703
PshBI ATTAAT 2 cut(s) 498, 993
Psp124BI GAGCTC 1 cut(s) 329
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 1225, 1294
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 2 cut(s) 1225, 1294
PspN4I GGNNCC 5 cut(s) 147, 148, 296, 756, 1233
PspPI GGNCC 3 cut(s) 146, 492, 1102
PspPPI RGGWCCY 1 cut(s) 146
PstI CTGCAG 1 cut(s) 763
PstNI CAGNNNCTG 1 cut(s) 1574
PsuI RGATCY 1 cut(s) 1231
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 2 cut(s) 281, 286
RsaNI GTAC 2 cut(s) 280, 285
RseI CAYNNNNRTG 4 cut(s) 212, 630, 1339, 1512
SacI GAGCTC 1 cut(s) 329
SatI GCNGC 4 cut(s) 936, 1019, 1029, 1184
Sau3AI GATC 3 cut(s) 429, 1213, 1231
Sau96I GGNCC 3 cut(s) 146, 492, 1102
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 2 cut(s) 105, 1429
ScrFI CCNGG 4 cut(s) 221, 222, 1227, 1296
SduI GDGCHC 4 cut(s) 124, 329, 389, 845
SfaNI GCATC 3 cut(s) 304, 1360, 1475
SfcI CTRYAG 1 cut(s) 759
SinI GGWCC 2 cut(s) 146, 1102
SmaI CCCGGG 1 cut(s) 222
SmiMI CAYNNNNRTG 4 cut(s) 212, 630, 1339, 1512
SmlI CTYRAG 1 cut(s) 1531
SmoI CTYRAG 1 cut(s) 1531
SphI GCATGC 1 cut(s) 1245
Sse9I AATT 9 cut(s) 127, 344, 994, 1006, 1042, 1209, 1447, 1543, 1580
SsiI CCGC 4 cut(s) 719, 935, 1018, 1184
SspMI CTAG 4 cut(s) 741, 930, 1067, 1326
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 4 cut(s) 219, 220, 1225, 1294
StyI CCWWGG 1 cut(s) 929
TaaI ACNGT 4 cut(s) 211, 284, 520, 1080
TaiI ACGT 2 cut(s) 23, 177
TaqI TCGA 3 cut(s) 131, 329, 839
TasI AATT 9 cut(s) 127, 344, 994, 1006, 1042, 1209, 1447, 1543, 1580
TatI WGTACW 2 cut(s) 279, 284
TauI GCSGC 3 cut(s) 938, 1021, 1186
TfiI GAWTC 1 cut(s) 451
TscAI CASTG 3 cut(s) 147, 525, 1579
TseFI GTSAC 3 cut(s) 21, 484, 729
TseI GCWGC 1 cut(s) 1028
Tsp45I GTSAC 3 cut(s) 21, 484, 729
TspDTI ATGAA 2 cut(s) 620, 642
TspGWI ACGGA 3 cut(s) 560, 1115, 1423
TspMI CCCGGG 1 cut(s) 220
TspRI CASTG 3 cut(s) 147, 525, 1579
Van91I CCANNNNNTGG 1 cut(s) 1593
VpaK11BI GGWCC 2 cut(s) 146, 1102
VspI ATTAAT 2 cut(s) 498, 993
XapI RAATTY 4 cut(s) 127, 344, 1006, 1447
XceI RCATGY 3 cut(s) 635, 707, 1245
XmaI CCCGGG 1 cut(s) 220
XmaJI CCTAGG 1 cut(s) 929
XmnI GAANNNNTTC 3 cut(s) 86, 1448, 1508
XspI CTAG 4 cut(s) 741, 930, 1067, 1326
ZraI GACGTC 1 cut(s) 175
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.