RchiOBHm_Chr2g0113071

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
25209023 .. 25212103
3081 bp
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UTR
Exon/CDS
Intron
PRQ48645

Sequence Viewer

Length: 144 bp
ATGGAAGGAGGTCAGCACTCCAAGATGCATTGCTCTTCCATTCACCAAGAATTCTTCCCCTTTGTAGTAGTAAAATCCAAAAATCATGTGAATTTGGGTAGTGAAGCCTCCATTGACCAAGATATCATCTGGCCAACCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

47

Amino Acids

5.32

Weight (kDa)

6.37

Isoelectric Point (pI)

58.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 131
AcsI RAATTY 2 cut(s) 50, 91
AoxI GGCC 1 cut(s) 131
ApoI RAATTY 2 cut(s) 50, 91
AsuHPI GGTGA 1 cut(s) 35
BalI TGGCCA 1 cut(s) 133
BmsI GCATC 1 cut(s) 15
Bse3DI GCAATG 1 cut(s) 28
BseMI GCAATG 1 cut(s) 28
BshFI GGCC 1 cut(s) 133
BsnI GGCC 1 cut(s) 133
BspANI GGCC 1 cut(s) 133
BspQI GCTCTTC 1 cut(s) 40
BsrDI GCAATG 1 cut(s) 28
Bst6I CTCTTC 1 cut(s) 40
BsuRI GGCC 1 cut(s) 133
CviAII CATG 1 cut(s) 86
CviJI RGCY 2 cut(s) 107, 133
CviKI_1 RGCY 2 cut(s) 107, 133
EaeI YGGCCR 1 cut(s) 131
Eam1104I CTCTTC 1 cut(s) 40
EarI CTCTTC 1 cut(s) 40
Eco32I GATATC 1 cut(s) 124
EcoRI GAATTC 1 cut(s) 50
EcoRV GATATC 1 cut(s) 124
EcoT22I ATGCAT 1 cut(s) 30
FaeI CATG 1 cut(s) 89
FaiI YATR 1 cut(s) 87
FatI CATG 1 cut(s) 85
HaeIII GGCC 1 cut(s) 133
Hin1II CATG 1 cut(s) 89
HphI GGTGA 1 cut(s) 35
HpyCH4V TGCA 1 cut(s) 28
Hsp92II CATG 1 cut(s) 89
LguI GCTCTTC 1 cut(s) 40
LpnPI CCDG 1 cut(s) 115
LweI GCATC 1 cut(s) 15
MboII GAAGA 2 cut(s) 27, 46
MlsI TGGCCA 1 cut(s) 133
MluCI AATT 2 cut(s) 50, 91
MluNI TGGCCA 1 cut(s) 133
MnlI CCTC 1 cut(s) 118
Mox20I TGGCCA 1 cut(s) 133
Mph1103I ATGCAT 1 cut(s) 30
MscI TGGCCA 1 cut(s) 133
Msp20I TGGCCA 1 cut(s) 133
NlaIII CATG 1 cut(s) 89
NsiI ATGCAT 1 cut(s) 30
PciSI GCTCTTC 1 cut(s) 40
SapI GCTCTTC 1 cut(s) 40
SetI ASST 1 cut(s) 13
SfaNI GCATC 1 cut(s) 15
SgeI CNNG 4 cut(s) 34, 59, 98, 131
Sse9I AATT 2 cut(s) 50, 91
TasI AATT 2 cut(s) 50, 91
XapI RAATTY 2 cut(s) 50, 91
Zsp2I ATGCAT 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.