Rh4DG164000

Universal stress protein A-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
32566989 .. 32567477
489 bp
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UTR
Exon/CDS
Intron
Rh4DG164000.1

Sequence Viewer

Length: 159 bp
ATGGGAGTGAACGAGTCGACGATCAAGGGCTACCCGCACGCCTCCATAAGCAGCCGCAAAGCCTTCGAGTGGACTCTCGACAAGATCGTCCGCTCCAACTCCTCCGGCTTCAAGCTTCTCTTCCTCCATGTCCAAGTTCCTGATGAAGACGTGAAGTGA

Protein Analysis

52

Amino Acids

5.86

Weight (kDa)

8.14

Isoelectric Point (pI)

19.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 86
AccBSI CCGCTC 1 cut(s) 93
AccI GTMKAC 1 cut(s) 17
AciI CCGC 3 cut(s) 35, 55, 91
AfiI CCNNNNNNNGG 1 cut(s) 69
AgsI TTSAA 1 cut(s) 112
AjiI CACGTC 1 cut(s) 151
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
ApeKI GCWGC 1 cut(s) 51
BbsI GAAGAC 1 cut(s) 153
BbvI GCAGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 46, 80
BisI GCNGC 2 cut(s) 52, 55
BlsI GCNGC 2 cut(s) 53, 56
BmgBI CACGTC 1 cut(s) 151
BpiI GAAGAC 1 cut(s) 153
Bsc4I CCNNNNNNNGG 1 cut(s) 69
BseLI CCNNNNNNNGG 1 cut(s) 69
BseRI GAGGAG 1 cut(s) 91
BseXI GCAGC 1 cut(s) 63
BsiSI CCGG 1 cut(s) 105
BslI CCNNNNNNNGG 1 cut(s) 69
Bsp143I GATC 2 cut(s) 21, 84
BspACI CCGC 3 cut(s) 35, 55, 91
BsrBI CCGCTC 1 cut(s) 93
BssMI GATC 2 cut(s) 21, 84
Bst6I CTCTTC 1 cut(s) 125
BstC8I GCNNGC 1 cut(s) 39
BstKTI GATC 2 cut(s) 24, 87
BstMBI GATC 2 cut(s) 21, 84
BstV1I GCAGC 1 cut(s) 63
BstV2I GAAGAC 1 cut(s) 153
BtrI CACGTC 1 cut(s) 151
Cac8I GCNNGC 1 cut(s) 39
CviAII CATG 1 cut(s) 128
CviJI RGCY 5 cut(s) 30, 54, 62, 108, 115
CviKI_1 RGCY 5 cut(s) 30, 54, 62, 108, 115
DpnI GATC 2 cut(s) 23, 86
DpnII GATC 2 cut(s) 21, 84
DrdI GACNNNNNNGTC 1 cut(s) 86
DseDI GACNNNNNNGTC 1 cut(s) 86
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
FaeI CATG 1 cut(s) 131
FaiI YATR 2 cut(s) 47, 129
FalI AAGNNNNNCTT 2 cut(s) 104, 136
FatI CATG 1 cut(s) 127
FauI CCCGC 1 cut(s) 42
FblI GTMKAC 1 cut(s) 17
Fnu4HI GCNGC 2 cut(s) 52, 55
Fsp4HI GCNGC 2 cut(s) 52, 55
GluI GCNGC 2 cut(s) 52, 55
HapII CCGG 1 cut(s) 105
Hin1II CATG 1 cut(s) 131
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 2 cut(s) 14, 73
HpaII CCGG 1 cut(s) 105
Hpy166II GTNNAC 3 cut(s) 10, 18, 72
Hpy188III TCNNGA 2 cut(s) 77, 140
Hpy8I GTNNAC 3 cut(s) 10, 18, 72
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 1 cut(s) 73
HpyCH4IV ACGT 1 cut(s) 150
HpySE526I ACGT 1 cut(s) 150
Hsp92II CATG 1 cut(s) 131
Kzo9I GATC 2 cut(s) 21, 84
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 2 cut(s) 118, 153
Lsp1109I GCAGC 1 cut(s) 63
MaeII ACGT 1 cut(s) 150
MalI GATC 2 cut(s) 23, 86
MbiI CCGCTC 1 cut(s) 93
MboI GATC 2 cut(s) 21, 84
MboII GAAGA 2 cut(s) 112, 158
MlyI GAGTC 2 cut(s) 23, 67
MmeI TCCRAC 1 cut(s) 120
MnlI CCTC 3 cut(s) 52, 112, 134
MspI CCGG 1 cut(s) 105
NdeII GATC 2 cut(s) 21, 84
NlaIII CATG 1 cut(s) 131
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PkrI GCNGC 2 cut(s) 53, 56
PleI GAGTC 2 cut(s) 22, 67
PpsI GAGTC 2 cut(s) 22, 67
SalI GTCGAC 1 cut(s) 16
SatI GCNGC 2 cut(s) 52, 55
Sau3AI GATC 2 cut(s) 21, 84
SchI GAGTC 2 cut(s) 23, 67
SetI ASST 2 cut(s) 117, 153
SsiI CCGC 3 cut(s) 35, 55, 91
TaiI ACGT 1 cut(s) 153
TaqI TCGA 3 cut(s) 17, 66, 78
TauI GCSGC 1 cut(s) 57
TseI GCWGC 1 cut(s) 51
TspDTI ATGAA 1 cut(s) 159
XmiI GTMKAC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.