No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g31500 FvH4_3g32320 FvH4_4g00690 FvH4_4g27850 FvH4_7g10870 FvH4_7g10870 FvH4_7g10870 |
| malus_domestica | MD16G1010500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0113071 RchiOBHm_Chr7g0220371 |
| rosa_laevigata | RLG00000001298 RLG00000002502 RLG00000028412 RLG00000031890 |
| rosa_multiflora | Rmu_ssc0000390.1_g000001 |
| rosa_roxburghii | Rroxscaffold_153G00436800 Rroxscaffold_153G00436810 Rroxscaffold_1G00031690 Rroxscaffold_2G00104890 Rroxscaffold_2G00148900 |
| rosa_rugosa | Rorug03G0199500 Rorug03G0364300.1 Rorug04G0059300 Rorug05G0361500 Rorug06G0155900 |
| rosa_samantha | Rh1BG179800 Rh2DG595900 Rh3BG075300 Rh4DG164000 Rh6AG040200 Rh7AG433700 Rh7BG406500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 175 |
| AciI | CCGC | 2 cut(s) | 25, 81 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AcyI | GRCGYC | 1 cut(s) | 78 |
| AgsI | TTSAA | 2 cut(s) | 124, 170 |
| Alw26I | GTCTC | 4 cut(s) | 50, 56, 69, 138 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 97, 129 |
| BcoDI | GTCTC | 4 cut(s) | 50, 56, 69, 138 |
| BfuAI | ACCTGC | 1 cut(s) | 175 |
| BisI | GCNGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 1 cut(s) | 82 |
| BmiI | GGNNCC | 1 cut(s) | 32 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| BsaHI | GRCGYC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 1 cut(s) | 34 |
| Bse1I | ACTGG | 1 cut(s) | 70 |
| BseDI | CCNNGG | 1 cut(s) | 34 |
| BseNI | ACTGG | 1 cut(s) | 70 |
| BseRI | GAGGAG | 2 cut(s) | 43, 51 |
| BsgI | GTGCAG | 1 cut(s) | 203 |
| BsmAI | GTCTC | 4 cut(s) | 50, 56, 69, 138 |
| BsmBI | CGTCTC | 2 cut(s) | 50, 69 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspACI | CCGC | 2 cut(s) | 25, 81 |
| BspLI | GGNNCC | 1 cut(s) | 32 |
| BspMI | ACCTGC | 1 cut(s) | 175 |
| BsrI | ACTGG | 1 cut(s) | 70 |
| BssECI | CCNNGG | 1 cut(s) | 34 |
| BssMI | GATC | 1 cut(s) | 85 |
| BssNI | GRCGYC | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 1 cut(s) | 156 |
| BstACI | GRCGYC | 1 cut(s) | 78 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMAI | GTCTC | 4 cut(s) | 50, 56, 69, 138 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| BveI | ACCTGC | 1 cut(s) | 175 |
| CseI | GACGC | 2 cut(s) | 86, 115 |
| CviJI | RGCY | 2 cut(s) | 33, 165 |
| CviKI_1 | RGCY | 2 cut(s) | 33, 165 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| Esp3I | CGTCTC | 2 cut(s) | 50, 69 |
| FaiI | YATR | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 1 cut(s) | 81 |
| GluI | GCNGC | 1 cut(s) | 81 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| HgaI | GACGC | 2 cut(s) | 86, 115 |
| Hin1I | GRCGYC | 1 cut(s) | 78 |
| Hpy188I | TCNGA | 2 cut(s) | 55, 221 |
| HpyAV | CCTTC | 3 cut(s) | 20, 164, 169 |
| HpyCH4III | ACNGT | 1 cut(s) | 156 |
| HpyCH4V | TGCA | 3 cut(s) | 91, 184, 191 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| Hsp92I | GRCGYC | 1 cut(s) | 78 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| LmnI | GCTCC | 2 cut(s) | 30, 68 |
| LpnPI | CCDG | 4 cut(s) | 51, 57, 95, 170 |
| MaeIII | GTNAC | 1 cut(s) | 103 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MluCI | AATT | 2 cut(s) | 198, 208 |
| MnlI | CCTC | 5 cut(s) | 21, 26, 29, 32, 198 |
| MspA1I | CMGCKG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NdeII | GATC | 1 cut(s) | 85 |
| NlaIV | GGNNCC | 1 cut(s) | 32 |
| NmeAIII | GCCGAG | 1 cut(s) | 59 |
| NmuCI | GTSAC | 1 cut(s) | 103 |
| PkrI | GCNGC | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 32 |
| SatI | GCNGC | 1 cut(s) | 81 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| SetI | ASST | 2 cut(s) | 12, 189 |
| SgeI | CNNG | 6 cut(s) | 47, 78, 84, 122, 142, 197 |
| Sse9I | AATT | 2 cut(s) | 198, 208 |
| SsiI | CCGC | 2 cut(s) | 25, 81 |
| TaaI | ACNGT | 1 cut(s) | 156 |
| TaqI | TCGA | 1 cut(s) | 46 |
| TasI | AATT | 2 cut(s) | 198, 208 |
| TauI | GCSGC | 1 cut(s) | 83 |
| TscAI | CASTG | 1 cut(s) | 108 |
| TseFI | GTSAC | 1 cut(s) | 103 |
| Tsp45I | GTSAC | 1 cut(s) | 103 |
| TspGWI | ACGGA | 1 cut(s) | 74 |
| TspRI | CASTG | 1 cut(s) | 108 |
| XapI | RAATTY | 1 cut(s) | 208 |