RchiOBHm_Chr7g0220371

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
39260522 .. 39260799
278 bp
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UTR
Exon/CDS
Intron
PRQ19727

Sequence Viewer

Length: 144 bp
ATGGCTTGTTTCTTATCATTGTGGTCAAATTTCATGGTAGAAAAGGCGAAGCTAGATGATGGACTATCAGATTTGTTGGGAGAGCTAAAGGATATGGCCTTTGATGGACTATTCAGAATTTTGTTTGGATTTGGCCTCTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

47

Amino Acids

5.32

Weight (kDa)

4.33

Isoelectric Point (pI)

27.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 28, 117
AluBI AGCT 2 cut(s) 52, 85
AluI AGCT 2 cut(s) 52, 85
AoxI GGCC 2 cut(s) 96, 133
ApoI RAATTY 2 cut(s) 28, 117
BccI CCATC 2 cut(s) 53, 98
BfaI CTAG 1 cut(s) 53
BshFI GGCC 2 cut(s) 98, 135
BsnI GGCC 2 cut(s) 98, 135
BspANI GGCC 2 cut(s) 98, 135
BsuRI GGCC 2 cut(s) 98, 135
CviAII CATG 1 cut(s) 34
CviJI RGCY 5 cut(s) 5, 52, 85, 98, 135
CviKI_1 RGCY 5 cut(s) 5, 52, 85, 98, 135
FaeI CATG 1 cut(s) 37
FaiI YATR 2 cut(s) 35, 95
FatI CATG 1 cut(s) 33
FspBI CTAG 1 cut(s) 53
HaeIII GGCC 2 cut(s) 98, 135
Hin1II CATG 1 cut(s) 37
Hpy188I TCNGA 2 cut(s) 70, 116
Hsp92II CATG 1 cut(s) 37
MaeI CTAG 1 cut(s) 53
MluCI AATT 2 cut(s) 28, 117
MseI TTAA 1 cut(s) 142
NlaIII CATG 1 cut(s) 37
SaqAI TTAA 1 cut(s) 142
SetI ASST 2 cut(s) 54, 87
SgeI CNNG 3 cut(s) 18, 46, 65
Sse9I AATT 2 cut(s) 28, 117
SspMI CTAG 1 cut(s) 53
TasI AATT 2 cut(s) 28, 117
Tru1I TTAA 1 cut(s) 142
Tru9I TTAA 1 cut(s) 142
TspDTI ATGAA 1 cut(s) 22
XapI RAATTY 2 cut(s) 28, 117
XspI CTAG 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.