No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0099351 RchiOBHm_Chr2g0103041 RchiOBHm_Chr2g0150881 RchiOBHm_Chr3g0495181 RchiOBHm_Chr4g0387961 RchiOBHm_Chr5g0055791 RchiOBHm_Chr7g0184561 |
| rosa_laevigata | RLG00000001087 RLG00000012261 RLG00000014393 RLG00000030000 |
| rosa_multiflora | Rmu_sc0006188.1_g000006 Rmu_sc0006493.1_g000021 Rmu_sc0032246.1_g000001 Rmu_sc0038175.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00034240 Rroxscaffold_4G00294030 Rroxscaffold_4G00295050 Rroxscaffold_6G00393460 Rroxscaffold_6G00417660 Rroxscaffold_6G00425110 |
| rosa_rugosa | Rorug07G0313500 |
| rosa_samantha | Rh1BG011700 Rh2AG245400 Rh3AG184600 Rh4CG286600 Rh5BG376400 Rh5CG399400 Rh7CG049100 Rh7CG068800 Rh7DG068200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 68 |
| AgsI | TTSAA | 2 cut(s) | 68, 174 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 27 |
| ApeKI | GCWGC | 1 cut(s) | 279 |
| ApoI | RAATTY | 1 cut(s) | 68 |
| BbvI | GCAGC | 1 cut(s) | 266 |
| BcoDI | GTCTC | 1 cut(s) | 27 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BisI | GCNGC | 1 cut(s) | 280 |
| BlsI | GCNGC | 1 cut(s) | 281 |
| BmsI | GCATC | 1 cut(s) | 91 |
| BpmI | CTGGAG | 1 cut(s) | 277 |
| BsaI | GGTCTC | 1 cut(s) | 27 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| BseXI | GCAGC | 1 cut(s) | 266 |
| BsmAI | GTCTC | 1 cut(s) | 27 |
| BsmI | GAATGC | 1 cut(s) | 277 |
| Bso31I | GGTCTC | 1 cut(s) | 27 |
| BspTNI | GGTCTC | 1 cut(s) | 27 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 1 cut(s) | 277 |
| BstMAI | GTCTC | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 266 |
| Cac8I | GCNNGC | 1 cut(s) | 277 |
| CviAII | CATG | 2 cut(s) | 110, 288 |
| CviJI | RGCY | 1 cut(s) | 223 |
| CviKI_1 | RGCY | 1 cut(s) | 223 |
| Eco31I | GGTCTC | 1 cut(s) | 27 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 113, 291 |
| FaiI | YATR | 5 cut(s) | 96, 111, 158, 169, 289 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 191, 223 |
| FatI | CATG | 2 cut(s) | 109, 287 |
| Fnu4HI | GCNGC | 1 cut(s) | 280 |
| Fsp4HI | GCNGC | 1 cut(s) | 280 |
| FspBI | CTAG | 1 cut(s) | 74 |
| GluI | GCNGC | 1 cut(s) | 280 |
| GsuI | CTGGAG | 1 cut(s) | 277 |
| Hin1II | CATG | 2 cut(s) | 113, 291 |
| HinfI | GANTC | 1 cut(s) | 264 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 198 |
| Hpy188III | TCNNGA | 3 cut(s) | 174, 256, 268 |
| HpyAV | CCTTC | 1 cut(s) | 63 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 282 |
| Hsp92II | CATG | 2 cut(s) | 113, 291 |
| LpnPI | CCDG | 2 cut(s) | 4, 241 |
| Lsp1109I | GCAGC | 1 cut(s) | 266 |
| LweI | GCATC | 1 cut(s) | 91 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MboII | GAAGA | 3 cut(s) | 39, 199, 273 |
| MluCI | AATT | 4 cut(s) | 60, 68, 138, 232 |
| MnlI | CCTC | 2 cut(s) | 3, 116 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 59, 137 |
| Mva1269I | GAATGC | 1 cut(s) | 277 |
| NlaIII | CATG | 2 cut(s) | 113, 291 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PctI | GAATGC | 1 cut(s) | 277 |
| PfeI | GAWTC | 1 cut(s) | 264 |
| PkrI | GCNGC | 1 cut(s) | 281 |
| SaqAI | TTAA | 2 cut(s) | 59, 137 |
| SatI | GCNGC | 1 cut(s) | 280 |
| SetI | ASST | 3 cut(s) | 14, 127, 225 |
| SfaNI | GCATC | 1 cut(s) | 91 |
| SgeI | CNNG | 8 cut(s) | 31, 86, 98, 122, 162, 186, 268, 280 |
| Sse9I | AATT | 4 cut(s) | 60, 68, 138, 232 |
| SspMI | CTAG | 1 cut(s) | 74 |
| TaqI | TCGA | 1 cut(s) | 267 |
| TasI | AATT | 4 cut(s) | 60, 68, 138, 232 |
| TfiI | GAWTC | 1 cut(s) | 264 |
| Tru1I | TTAA | 2 cut(s) | 59, 137 |
| Tru9I | TTAA | 2 cut(s) | 59, 137 |
| TseI | GCWGC | 1 cut(s) | 279 |
| TspDTI | ATGAA | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 68 |
| XspI | CTAG | 1 cut(s) | 74 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |