Ribosomal protein L12
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0099351 RchiOBHm_Chr2g0103041 RchiOBHm_Chr2g0150881 RchiOBHm_Chr3g0495181 RchiOBHm_Chr4g0387961 RchiOBHm_Chr5g0055791 RchiOBHm_Chr7g0184561 |
| rosa_laevigata | RLG00000001087 RLG00000012261 RLG00000014393 RLG00000030000 |
| rosa_multiflora | Rmu_sc0006188.1_g000006 Rmu_sc0006493.1_g000021 Rmu_sc0032246.1_g000001 Rmu_sc0038175.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00034240 Rroxscaffold_4G00294030 Rroxscaffold_4G00295050 Rroxscaffold_6G00393460 Rroxscaffold_6G00417660 Rroxscaffold_6G00425110 |
| rosa_rugosa | Rorug07G0313500 |
| rosa_samantha | Rh1BG011700 Rh2AG245400 Rh3AG184600 Rh4CG286600 Rh5BG376400 Rh5CG399400 Rh7CG049100 Rh7CG068800 Rh7DG068200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 67 |
| AccII | CGCG | 1 cut(s) | 131 |
| AciI | CCGC | 1 cut(s) | 131 |
| AcyI | GRCGYC | 1 cut(s) | 64 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 30 |
| AflIII | ACRYGT | 1 cut(s) | 83 |
| AgsI | TTSAA | 1 cut(s) | 56 |
| AluBI | AGCT | 2 cut(s) | 17, 115 |
| AluI | AGCT | 2 cut(s) | 17, 115 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| ApeKI | GCWGC | 1 cut(s) | 134 |
| BbsI | GAAGAC | 3 cut(s) | 11, 67, 86 |
| BbvI | GCAGC | 1 cut(s) | 146 |
| BisI | GCNGC | 2 cut(s) | 132, 135 |
| BlsI | GCNGC | 2 cut(s) | 133, 136 |
| BpiI | GAAGAC | 3 cut(s) | 11, 67, 86 |
| BpuEI | CTTGAG | 2 cut(s) | 58, 137 |
| BsaBI | GATNNNNATC | 1 cut(s) | 146 |
| BsaHI | GRCGYC | 1 cut(s) | 64 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bse1I | ACTGG | 1 cut(s) | 68 |
| Bse8I | GATNNNNATC | 1 cut(s) | 146 |
| BseJI | GATNNNNATC | 1 cut(s) | 146 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BseMII | CTCAG | 1 cut(s) | 81 |
| BseNI | ACTGG | 1 cut(s) | 68 |
| BseXI | GCAGC | 1 cut(s) | 146 |
| Bsh1236I | CGCG | 1 cut(s) | 131 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bsp143I | GATC | 2 cut(s) | 96, 141 |
| BspACI | CCGC | 1 cut(s) | 131 |
| BspCNI | CTCAG | 1 cut(s) | 82 |
| BspFNI | CGCG | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 68 |
| BssMI | GATC | 2 cut(s) | 96, 141 |
| BssNI | GRCGYC | 1 cut(s) | 64 |
| Bst4CI | ACNGT | 1 cut(s) | 175 |
| BstACI | GRCGYC | 1 cut(s) | 64 |
| BstDEI | CTNAG | 1 cut(s) | 90 |
| BstFNI | CGCG | 1 cut(s) | 131 |
| BstKTI | GATC | 2 cut(s) | 99, 144 |
| BstMBI | GATC | 2 cut(s) | 96, 141 |
| BstNSI | RCATGY | 1 cut(s) | 87 |
| BstUI | CGCG | 1 cut(s) | 131 |
| BstV1I | GCAGC | 1 cut(s) | 146 |
| BstV2I | GAAGAC | 3 cut(s) | 11, 67, 86 |
| BtsIMutI | CAGTG | 1 cut(s) | 171 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| CseI | GACGC | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 84 |
| CviJI | RGCY | 2 cut(s) | 17, 115 |
| CviKI_1 | RGCY | 2 cut(s) | 17, 115 |
| DdeI | CTNAG | 1 cut(s) | 90 |
| DpnI | GATC | 2 cut(s) | 98, 143 |
| DpnII | GATC | 2 cut(s) | 96, 141 |
| FaeI | CATG | 1 cut(s) | 87 |
| FaiI | YATR | 3 cut(s) | 85, 110, 152 |
| FatI | CATG | 1 cut(s) | 83 |
| Fnu4HI | GCNGC | 2 cut(s) | 132, 135 |
| Fsp4HI | GCNGC | 2 cut(s) | 132, 135 |
| GluI | GCNGC | 2 cut(s) | 132, 135 |
| HgaI | GACGC | 1 cut(s) | 137 |
| Hin1I | GRCGYC | 1 cut(s) | 64 |
| Hin1II | CATG | 1 cut(s) | 87 |
| HindIII | AAGCTT | 1 cut(s) | 113 |
| HinfI | GANTC | 2 cut(s) | 28, 42 |
| Hpy188I | TCNGA | 2 cut(s) | 51, 91 |
| HpyAV | CCTTC | 1 cut(s) | 50 |
| HpyCH4III | ACNGT | 1 cut(s) | 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 64 |
| HpyF3I | CTNAG | 1 cut(s) | 90 |
| HpySE526I | ACGT | 1 cut(s) | 64 |
| Hsp92I | GRCGYC | 1 cut(s) | 64 |
| Hsp92II | CATG | 1 cut(s) | 87 |
| Kzo9I | GATC | 2 cut(s) | 96, 141 |
| LmnI | GCTCC | 1 cut(s) | 14 |
| LpnPI | CCDG | 1 cut(s) | 81 |
| Lsp1109I | GCAGC | 1 cut(s) | 146 |
| MaeII | ACGT | 1 cut(s) | 64 |
| MalI | GATC | 2 cut(s) | 98, 143 |
| MboI | GATC | 2 cut(s) | 96, 141 |
| MboII | GAAGA | 4 cut(s) | 16, 72, 91, 106 |
| MlyI | GAGTC | 1 cut(s) | 51 |
| MnlI | CCTC | 1 cut(s) | 151 |
| MvnI | CGCG | 1 cut(s) | 131 |
| NdeII | GATC | 2 cut(s) | 96, 141 |
| NlaIII | CATG | 1 cut(s) | 87 |
| NmeAIII | GCCGAG | 1 cut(s) | 49 |
| NspI | RCATGY | 1 cut(s) | 87 |
| PciI | ACATGT | 1 cut(s) | 83 |
| PfeI | GAWTC | 1 cut(s) | 28 |
| PkrI | GCNGC | 2 cut(s) | 133, 136 |
| PleI | GAGTC | 1 cut(s) | 50 |
| PpsI | GAGTC | 1 cut(s) | 50 |
| PscI | ACATGT | 1 cut(s) | 83 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| SatI | GCNGC | 2 cut(s) | 132, 135 |
| Sau3AI | GATC | 2 cut(s) | 96, 141 |
| SchI | GAGTC | 1 cut(s) | 51 |
| SetI | ASST | 3 cut(s) | 19, 67, 117 |
| SgeI | CNNG | 7 cut(s) | 24, 37, 49, 80, 96, 128, 142 |
| SmlI | CTYRAG | 2 cut(s) | 37, 116 |
| SmoI | CTYRAG | 2 cut(s) | 37, 116 |
| SsiI | CCGC | 1 cut(s) | 131 |
| TaaI | ACNGT | 1 cut(s) | 175 |
| TaiI | ACGT | 1 cut(s) | 67 |
| TauI | GCSGC | 1 cut(s) | 134 |
| TfiI | GAWTC | 1 cut(s) | 28 |
| TscAI | CASTG | 1 cut(s) | 178 |
| TseI | GCWGC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 178 |
| XceI | RCATGY | 1 cut(s) | 87 |
| ZraI | GACGTC | 1 cut(s) | 65 |