No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0114841 RchiOBHm_Chr4g0394041 RchiOBHm_Chr5g0027701 RchiOBHm_Chr5g0040341 |
| rosa_laevigata | RLG00000018218 |
| rosa_multiflora | Rmu_sc0007341.1_g000037 |
| rosa_roxburghii | Rroxscaffold_178G00437430 Rroxscaffold_180G00433520 Rroxscaffold_1G00002770 Rroxscaffold_1G00035020 Rroxscaffold_1G00063620 Rroxscaffold_1G00071510 Rroxscaffold_4G00312050 Rroxscaffold_4G00312060 Rroxscaffold_4G00316650 Rroxscaffold_7G00205600 |
| rosa_rugosa | Rorug04G0458600 Rorug07G0190100 |
| rosa_samantha | Rh1CG078100 Rh1DG149700 Rh2BG246300 Rh2CG254100 Rh2DG439800 Rh4AG097400 Rh4AG414200 Rh4CG093300 Rh5AG110100 Rh5CG213300 Rh7BG058300 |
| rosa_wichuraiana | Rw5G016900 Rw6G005030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 151 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 2 cut(s) | 107, 111 |
| AluI | AGCT | 2 cut(s) | 107, 111 |
| Alw21I | GWGCWC | 1 cut(s) | 120 |
| Alw44I | GTGCAC | 1 cut(s) | 116 |
| ApaLI | GTGCAC | 1 cut(s) | 116 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| AsuNHI | GCTAGC | 1 cut(s) | 107 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| AxyI | CCTNAGG | 1 cut(s) | 24 |
| BaeGI | GKGCMC | 1 cut(s) | 120 |
| BbsI | GAAGAC | 1 cut(s) | 121 |
| Bbv12I | GWGCWC | 1 cut(s) | 120 |
| BceAI | ACGGC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BfaI | CTAG | 1 cut(s) | 108 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| BmtI | GCTAGC | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 121 |
| BsaAI | YACGTR | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| Bse21I | CCTNAGG | 1 cut(s) | 24 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 159 |
| BseSI | GKGCMC | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 120 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp143I | GATC | 1 cut(s) | 170 |
| BspACI | CCGC | 1 cut(s) | 151 |
| BspOI | GCTAGC | 1 cut(s) | 111 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 1 cut(s) | 170 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 45 |
| BstBAI | YACGTR | 1 cut(s) | 115 |
| BstC8I | GCNNGC | 1 cut(s) | 109 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstDSI | CCRYGG | 1 cut(s) | 10 |
| BstF5I | GGATG | 1 cut(s) | 159 |
| BstKTI | GATC | 1 cut(s) | 173 |
| BstMBI | GATC | 1 cut(s) | 170 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 148 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| BstSLI | GKGCMC | 1 cut(s) | 120 |
| BstV2I | GAAGAC | 1 cut(s) | 121 |
| Bsu36I | CCTNAGG | 1 cut(s) | 24 |
| BtgI | CCRYGG | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 159 |
| BtsI | GCAGTG | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 77 |
| Cac8I | GCNNGC | 1 cut(s) | 109 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| CviAII | CATG | 3 cut(s) | 54, 174, 186 |
| CviJI | RGCY | 4 cut(s) | 5, 29, 107, 111 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 29, 107, 111 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| DpnI | GATC | 1 cut(s) | 172 |
| DpnII | GATC | 1 cut(s) | 170 |
| EciI | GGCGGA | 1 cut(s) | 166 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| Eco81I | CCTNAGG | 1 cut(s) | 24 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| FaeI | CATG | 3 cut(s) | 57, 177, 189 |
| FaiI | YATR | 6 cut(s) | 48, 50, 55, 84, 175, 187 |
| FatI | CATG | 3 cut(s) | 53, 173, 185 |
| FokI | GGATG | 1 cut(s) | 166 |
| FspBI | CTAG | 1 cut(s) | 108 |
| Hin1II | CATG | 3 cut(s) | 57, 177, 189 |
| HincII | GTYRAC | 1 cut(s) | 41 |
| HindII | GTYRAC | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 2 cut(s) | 41, 118 |
| Hpy8I | GTNNAC | 2 cut(s) | 41, 118 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 45 |
| HpyCH4IV | ACGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 1 cut(s) | 118 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 148 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| HpySE526I | ACGT | 1 cut(s) | 114 |
| Hsp92II | CATG | 3 cut(s) | 57, 177, 189 |
| Kzo9I | GATC | 1 cut(s) | 170 |
| LpnPI | CCDG | 2 cut(s) | 119, 146 |
| MaeI | CTAG | 1 cut(s) | 108 |
| MaeII | ACGT | 1 cut(s) | 114 |
| MalI | GATC | 1 cut(s) | 172 |
| MboI | GATC | 1 cut(s) | 170 |
| MboII | GAAGA | 2 cut(s) | 121, 180 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MluCI | AATT | 1 cut(s) | 34 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 148 |
| NdeII | GATC | 1 cut(s) | 170 |
| NheI | GCTAGC | 1 cut(s) | 107 |
| NlaIII | CATG | 3 cut(s) | 57, 177, 189 |
| PfoI | TCCNGGA | 1 cut(s) | 132 |
| Ppu21I | YACGTR | 1 cut(s) | 115 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| Sau3AI | GATC | 1 cut(s) | 170 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SetI | ASST | 3 cut(s) | 109, 113, 117 |
| SgeI | CNNG | 9 cut(s) | 23, 42, 66, 120, 127, 145, 146, 155, 177 |
| SinI | GGWCC | 1 cut(s) | 92 |
| Sse9I | AATT | 1 cut(s) | 34 |
| SsiI | CCGC | 1 cut(s) | 151 |
| SspMI | CTAG | 1 cut(s) | 108 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| TaaI | ACNGT | 2 cut(s) | 11, 45 |
| TaiI | ACGT | 1 cut(s) | 117 |
| TasI | AATT | 1 cut(s) | 34 |
| TscAI | CASTG | 1 cut(s) | 77 |
| TspRI | CASTG | 1 cut(s) | 77 |
| VneI | GTGCAC | 1 cut(s) | 116 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 108 |