No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0114841 RchiOBHm_Chr4g0394041 RchiOBHm_Chr5g0027701 RchiOBHm_Chr5g0040341 |
| rosa_laevigata | RLG00000018218 |
| rosa_multiflora | Rmu_sc0007341.1_g000037 |
| rosa_roxburghii | Rroxscaffold_178G00437430 Rroxscaffold_180G00433520 Rroxscaffold_1G00002770 Rroxscaffold_1G00035020 Rroxscaffold_1G00063620 Rroxscaffold_1G00071510 Rroxscaffold_4G00312050 Rroxscaffold_4G00312060 Rroxscaffold_4G00316650 Rroxscaffold_7G00205600 |
| rosa_rugosa | Rorug04G0458600 Rorug07G0190100 |
| rosa_samantha | Rh1CG078100 Rh1DG149700 Rh2BG246300 Rh2CG254100 Rh2DG439800 Rh4AG097400 Rh4AG414200 Rh4CG093300 Rh5AG110100 Rh5CG213300 Rh7BG058300 |
| rosa_wichuraiana | Rw5G016900 Rw6G005030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 135 |
| AgsI | TTSAA | 3 cut(s) | 7, 70, 160 |
| Alw26I | GTCTC | 1 cut(s) | 30 |
| AlwI | GGATC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 129 |
| BciVI | GTATCC | 1 cut(s) | 22 |
| BcoDI | GTCTC | 1 cut(s) | 30 |
| BfuI | GTATCC | 1 cut(s) | 22 |
| BpuEI | CTTGAG | 1 cut(s) | 12 |
| BseMII | CTCAG | 1 cut(s) | 157 |
| BsmAI | GTCTC | 1 cut(s) | 30 |
| Bsp143I | GATC | 1 cut(s) | 127 |
| BspCNI | CTCAG | 1 cut(s) | 156 |
| BspPI | GGATC | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 127 |
| BstDEI | CTNAG | 1 cut(s) | 143 |
| BstKTI | GATC | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 30 |
| BstMBI | GATC | 1 cut(s) | 127 |
| BsuI | GTATCC | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 1 cut(s) | 112 |
| CviAII | CATG | 1 cut(s) | 80 |
| CviJI | RGCY | 1 cut(s) | 90 |
| CviKI_1 | RGCY | 1 cut(s) | 90 |
| DdeI | CTNAG | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 129 |
| DpnII | GATC | 1 cut(s) | 127 |
| FaeI | CATG | 1 cut(s) | 83 |
| FaiI | YATR | 3 cut(s) | 17, 81, 97 |
| FatI | CATG | 1 cut(s) | 79 |
| Hin1II | CATG | 1 cut(s) | 83 |
| HinfI | GANTC | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| HpyCH4V | TGCA | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 143 |
| Hsp92II | CATG | 1 cut(s) | 83 |
| Kzo9I | GATC | 1 cut(s) | 127 |
| LpnPI | CCDG | 2 cut(s) | 110, 125 |
| MaeIII | GTNAC | 1 cut(s) | 107 |
| MalI | GATC | 1 cut(s) | 129 |
| MboI | GATC | 1 cut(s) | 127 |
| MboII | GAAGA | 1 cut(s) | 131 |
| MluCI | AATT | 1 cut(s) | 182 |
| MlyI | GAGTC | 1 cut(s) | 32 |
| MseI | TTAA | 1 cut(s) | 164 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| NdeII | GATC | 1 cut(s) | 127 |
| NlaIII | CATG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 1 cut(s) | 107 |
| PleI | GAGTC | 1 cut(s) | 31 |
| PpsI | GAGTC | 1 cut(s) | 31 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| SaqAI | TTAA | 1 cut(s) | 164 |
| Sau3AI | GATC | 1 cut(s) | 127 |
| SchI | GAGTC | 1 cut(s) | 32 |
| SetI | ASST | 2 cut(s) | 114, 152 |
| SgeI | CNNG | 6 cut(s) | 41, 92, 96, 124, 137, 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| SmlI | CTYRAG | 1 cut(s) | 27 |
| SmoI | CTYRAG | 1 cut(s) | 27 |
| Sse9I | AATT | 1 cut(s) | 182 |
| TasI | AATT | 1 cut(s) | 182 |
| Tru1I | TTAA | 1 cut(s) | 164 |
| Tru9I | TTAA | 1 cut(s) | 164 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TseFI | GTSAC | 1 cut(s) | 107 |
| Tsp45I | GTSAC | 1 cut(s) | 107 |
| TspDTI | ATGAA | 1 cut(s) | 68 |
| TspRI | CASTG | 1 cut(s) | 112 |