C3HC zinc finger-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0114841 RchiOBHm_Chr4g0394041 RchiOBHm_Chr5g0027701 RchiOBHm_Chr5g0040341 |
| rosa_laevigata | RLG00000018218 |
| rosa_multiflora | Rmu_sc0007341.1_g000037 |
| rosa_roxburghii | Rroxscaffold_178G00437430 Rroxscaffold_180G00433520 Rroxscaffold_1G00002770 Rroxscaffold_1G00035020 Rroxscaffold_1G00063620 Rroxscaffold_1G00071510 Rroxscaffold_4G00312050 Rroxscaffold_4G00312060 Rroxscaffold_4G00316650 Rroxscaffold_7G00205600 |
| rosa_rugosa | Rorug04G0458600 Rorug07G0190100 |
| rosa_samantha | Rh1CG078100 Rh1DG149700 Rh2BG246300 Rh2CG254100 Rh2DG439800 Rh4AG097400 Rh4AG414200 Rh4CG093300 Rh5AG110100 Rh5CG213300 Rh7BG058300 |
| rosa_wichuraiana | Rw5G016900 Rw6G005030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 145, 358 |
| AclWI | GGATC | 1 cut(s) | 281 |
| AdeI | CACNNNGTG | 1 cut(s) | 452 |
| AfaI | GTAC | 3 cut(s) | 83, 109, 489 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 449 |
| AgsI | TTSAA | 2 cut(s) | 101, 225 |
| AjnI | CCWGG | 2 cut(s) | 448, 500 |
| AluBI | AGCT | 1 cut(s) | 554 |
| AluI | AGCT | 1 cut(s) | 554 |
| Alw21I | GWGCWC | 2 cut(s) | 39, 529 |
| Alw26I | GTCTC | 2 cut(s) | 335, 376 |
| AlwI | GGATC | 1 cut(s) | 281 |
| AsuHPI | GGTGA | 2 cut(s) | 322, 438 |
| Bbv12I | GWGCWC | 2 cut(s) | 39, 529 |
| BccI | CCATC | 3 cut(s) | 398, 451, 454 |
| BciT130I | CCWGG | 2 cut(s) | 450, 502 |
| BcoDI | GTCTC | 2 cut(s) | 335, 376 |
| BfaI | CTAG | 3 cut(s) | 72, 87, 531 |
| BglII | AGATCT | 1 cut(s) | 430 |
| Bme1390I | CCNGG | 2 cut(s) | 450, 502 |
| BmiI | GGNNCC | 3 cut(s) | 60, 288, 356 |
| BmrFI | CCNGG | 2 cut(s) | 450, 502 |
| BmsI | GCATC | 4 cut(s) | 84, 137, 490, 518 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 304, 336 |
| BpuEI | CTTGAG | 1 cut(s) | 344 |
| BsaJI | CCNNGG | 1 cut(s) | 500 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 449 |
| Bse118I | RCCGGY | 1 cut(s) | 46 |
| BseBI | CCWGG | 2 cut(s) | 450, 502 |
| BseDI | CCNNGG | 1 cut(s) | 500 |
| BseGI | GGATG | 3 cut(s) | 128, 409, 465 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 449 |
| BseMII | CTCAG | 2 cut(s) | 246, 564 |
| BseRI | GAGGAG | 3 cut(s) | 353, 394, 404 |
| BsiHKAI | GWGCWC | 2 cut(s) | 39, 529 |
| BsiSI | CCGG | 1 cut(s) | 47 |
| BslFI | GGGAC | 1 cut(s) | 408 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 449 |
| BsmAI | GTCTC | 2 cut(s) | 335, 376 |
| BsmBI | CGTCTC | 1 cut(s) | 376 |
| BsmFI | GGGAC | 1 cut(s) | 408 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 529 |
| Bsp1407I | TGTACA | 2 cut(s) | 107, 487 |
| Bsp143I | GATC | 2 cut(s) | 273, 430 |
| BspACI | CCGC | 2 cut(s) | 145, 358 |
| BspCNI | CTCAG | 2 cut(s) | 245, 563 |
| BspLI | GGNNCC | 3 cut(s) | 60, 288, 356 |
| BspPI | GGATC | 1 cut(s) | 281 |
| BspQI | GCTCTTC | 1 cut(s) | 404 |
| BsrFI | RCCGGY | 1 cut(s) | 46 |
| BsrGI | TGTACA | 2 cut(s) | 107, 487 |
| BssAI | RCCGGY | 1 cut(s) | 46 |
| BssECI | CCNNGG | 1 cut(s) | 500 |
| BssMI | GATC | 2 cut(s) | 273, 430 |
| Bst2UI | CCWGG | 2 cut(s) | 450, 502 |
| Bst6I | CTCTTC | 1 cut(s) | 404 |
| BstAUI | TGTACA | 2 cut(s) | 107, 487 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 3 cut(s) | 232, 434, 550 |
| BstF5I | GGATG | 3 cut(s) | 128, 409, 465 |
| BstKTI | GATC | 2 cut(s) | 276, 433 |
| BstMAI | GTCTC | 2 cut(s) | 335, 376 |
| BstMBI | GATC | 2 cut(s) | 273, 430 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 551 |
| BstNI | CCWGG | 2 cut(s) | 450, 502 |
| BstSCI | CCNGG | 2 cut(s) | 448, 500 |
| BstX2I | RGATCY | 1 cut(s) | 430 |
| BstYI | RGATCY | 1 cut(s) | 430 |
| BtsCI | GGATG | 3 cut(s) | 128, 409, 465 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| Cfr10I | RCCGGY | 1 cut(s) | 46 |
| CsiI | ACCWGGT | 1 cut(s) | 448 |
| Csp6I | GTAC | 3 cut(s) | 82, 108, 488 |
| CviAII | CATG | 4 cut(s) | 79, 111, 415, 485 |
| CviJI | RGCY | 3 cut(s) | 316, 439, 554 |
| CviKI_1 | RGCY | 3 cut(s) | 316, 439, 554 |
| CviQI | GTAC | 3 cut(s) | 82, 108, 488 |
| DdeI | CTNAG | 3 cut(s) | 232, 434, 550 |
| DpnI | GATC | 2 cut(s) | 275, 432 |
| DpnII | GATC | 2 cut(s) | 273, 430 |
| DraIII | CACNNNGTG | 1 cut(s) | 452 |
| Eam1104I | CTCTTC | 1 cut(s) | 404 |
| EarI | CTCTTC | 1 cut(s) | 404 |
| EciI | GGCGGA | 1 cut(s) | 347 |
| EcoRII | CCWGG | 2 cut(s) | 448, 500 |
| Esp3I | CGTCTC | 1 cut(s) | 376 |
| FaeI | CATG | 4 cut(s) | 82, 114, 418, 488 |
| FaiI | YATR | 5 cut(s) | 80, 112, 349, 416, 486 |
| FaqI | GGGAC | 1 cut(s) | 408 |
| FatI | CATG | 4 cut(s) | 78, 110, 414, 484 |
| FauI | CCCGC | 1 cut(s) | 152 |
| FokI | GGATG | 3 cut(s) | 115, 416, 472 |
| FspBI | CTAG | 3 cut(s) | 72, 87, 531 |
| HapII | CCGG | 1 cut(s) | 47 |
| Hin1II | CATG | 4 cut(s) | 82, 114, 418, 488 |
| HinfI | GANTC | 4 cut(s) | 5, 97, 418, 470 |
| HpaII | CCGG | 1 cut(s) | 47 |
| HphI | GGTGA | 2 cut(s) | 322, 438 |
| Hpy188I | TCNGA | 2 cut(s) | 161, 175 |
| Hpy188III | TCNNGA | 5 cut(s) | 234, 284, 299, 323, 566 |
| Hpy99I | CGWCG | 1 cut(s) | 55 |
| HpyAV | CCTTC | 3 cut(s) | 23, 305, 563 |
| HpyCH4V | TGCA | 3 cut(s) | 27, 128, 509 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 551 |
| HpyF3I | CTNAG | 3 cut(s) | 232, 434, 550 |
| Hsp92II | CATG | 4 cut(s) | 82, 114, 418, 488 |
| KroI | GCCGGC | 1 cut(s) | 46 |
| KroNI | GCCGGC | 1 cut(s) | 48 |
| Kzo9I | GATC | 2 cut(s) | 273, 430 |
| LguI | GCTCTTC | 1 cut(s) | 404 |
| LmnI | GCTCC | 1 cut(s) | 524 |
| LweI | GCATC | 4 cut(s) | 84, 137, 490, 518 |
| MabI | ACCWGGT | 1 cut(s) | 448 |
| MaeI | CTAG | 3 cut(s) | 72, 87, 531 |
| MalI | GATC | 2 cut(s) | 275, 432 |
| MboI | GATC | 2 cut(s) | 273, 430 |
| MboII | GAAGA | 4 cut(s) | 173, 220, 421, 487 |
| MflI | RGATCY | 1 cut(s) | 430 |
| MhlI | GDGCHC | 2 cut(s) | 39, 529 |
| MluCI | AATT | 2 cut(s) | 165, 187 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MmeI | TCCRAC | 1 cut(s) | 156 |
| MreI | CGCCGGCG | 1 cut(s) | 46 |
| MroNI | GCCGGC | 1 cut(s) | 46 |
| MseI | TTAA | 2 cut(s) | 186, 477 |
| MspI | CCGG | 1 cut(s) | 47 |
| MspR9I | CCNGG | 2 cut(s) | 450, 502 |
| MvaI | CCWGG | 2 cut(s) | 450, 502 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 551 |
| NaeI | GCCGGC | 1 cut(s) | 48 |
| NdeII | GATC | 2 cut(s) | 273, 430 |
| NgoMIV | GCCGGC | 1 cut(s) | 46 |
| NlaIII | CATG | 4 cut(s) | 82, 114, 418, 488 |
| NlaIV | GGNNCC | 3 cut(s) | 60, 288, 356 |
| PciSI | GCTCTTC | 1 cut(s) | 404 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 59 |
| PdiI | GCCGGC | 1 cut(s) | 48 |
| PfeI | GAWTC | 3 cut(s) | 97, 418, 470 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp6I | CCWGG | 2 cut(s) | 448, 500 |
| PspGI | CCWGG | 2 cut(s) | 448, 500 |
| PspN4I | GGNNCC | 3 cut(s) | 60, 288, 356 |
| PsuI | RGATCY | 1 cut(s) | 430 |
| RsaI | GTAC | 3 cut(s) | 83, 109, 489 |
| RsaNI | GTAC | 3 cut(s) | 82, 108, 488 |
| SapI | GCTCTTC | 1 cut(s) | 404 |
| SaqAI | TTAA | 2 cut(s) | 186, 477 |
| Sau3AI | GATC | 2 cut(s) | 273, 430 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 2 cut(s) | 450, 502 |
| SduI | GDGCHC | 2 cut(s) | 39, 529 |
| SetI | ASST | 8 cut(s) | 92, 223, 292, 312, 454, 520, 532, 556 |
| SexAI | ACCWGGT | 1 cut(s) | 448 |
| SfaNI | GCATC | 4 cut(s) | 84, 137, 490, 518 |
| SgrAI | CRCCGGYG | 1 cut(s) | 46 |
| SmlI | CTYRAG | 1 cut(s) | 323 |
| SmoI | CTYRAG | 1 cut(s) | 323 |
| Sse9I | AATT | 2 cut(s) | 165, 187 |
| SsiI | CCGC | 2 cut(s) | 145, 358 |
| SspI | AATATT | 1 cut(s) | 280 |
| SspMI | CTAG | 3 cut(s) | 72, 87, 531 |
| StyD4I | CCNGG | 2 cut(s) | 448, 500 |
| TaqI | TCGA | 3 cut(s) | 33, 217, 468 |
| TasI | AATT | 2 cut(s) | 165, 187 |
| TatI | WGTACW | 3 cut(s) | 81, 107, 487 |
| TfiI | GAWTC | 3 cut(s) | 97, 418, 470 |
| Tru1I | TTAA | 2 cut(s) | 186, 477 |
| Tru9I | TTAA | 2 cut(s) | 186, 477 |
| TspDTI | ATGAA | 1 cut(s) | 431 |
| TspGWI | ACGGA | 1 cut(s) | 68 |
| XspI | CTAG | 3 cut(s) | 72, 87, 531 |