No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g06361 |
| malus_domestica | MD08G1226000.v1.1 |
| pyrus_communis | pycom05g24160 |
| rosa_chinensis | RchiOBHm_Chr2g0159691 RchiOBHm_Chr2g0168161 RchiOBHm_Chr4g0433811 RchiOBHm_Chr5g0018671 RchiOBHm_Chr5g0082331 |
| rosa_multiflora | Rmu_sc0000698.1_g000050 |
| rosa_roxburghii | Rroxscaffold_1G00019890 Rroxscaffold_1G00030050 Rroxscaffold_1G00032950 Rroxscaffold_5G00335810 Rroxscaffold_5G00345660 Rroxscaffold_5G00345670 Rroxscaffold_6G00401880 Rroxscaffold_6G00401890 Rroxscaffold_7G00194550 |
| rosa_rugosa | Rorug04G0046200 Rorug04G0124800 Rorug04G0335500 Rorug04G0429300 Rorug05G0081300 Rorug05G0117900 Rorug05G0181600 Rorug05G0438900 Rorug05G0452900 Rorug05G0506200.1 Rorug06G0093700 Rorug06G0458300 Rorug07G0106200 Rorug07G0121100 |
| rosa_samantha | Rh2DG566900 Rh3CG025900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 169 |
| AccBSI | CCGCTC | 1 cut(s) | 13 |
| AciI | CCGC | 2 cut(s) | 13, 106 |
| AcoI | YGGCCR | 1 cut(s) | 40 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AcvI | CACGTG | 2 cut(s) | 25, 77 |
| AflIII | ACRYGT | 3 cut(s) | 24, 76, 100 |
| AgsI | TTSAA | 1 cut(s) | 89 |
| AjiI | CACGTC | 1 cut(s) | 57 |
| AoxI | GGCC | 1 cut(s) | 40 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 1 cut(s) | 51 |
| AvaII | GGWCC | 1 cut(s) | 150 |
| BanII | GRGCYC | 1 cut(s) | 53 |
| BbrPI | CACGTG | 2 cut(s) | 25, 77 |
| BceAI | ACGGC | 1 cut(s) | 55 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 48 |
| Bme18I | GGWCC | 1 cut(s) | 150 |
| BmgBI | CACGTC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 1 cut(s) | 150 |
| BmiI | GGNNCC | 2 cut(s) | 52, 151 |
| BsaAI | YACGTR | 2 cut(s) | 25, 77 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 35, 65 |
| BseGI | GGATG | 1 cut(s) | 129 |
| BshFI | GGCC | 1 cut(s) | 42 |
| BslFI | GGGAC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 1 cut(s) | 163 |
| BsnI | GGCC | 1 cut(s) | 42 |
| Bsp1286I | GDGCHC | 1 cut(s) | 53 |
| BspACI | CCGC | 2 cut(s) | 13, 106 |
| BspANI | GGCC | 1 cut(s) | 42 |
| BspLI | GGNNCC | 2 cut(s) | 52, 151 |
| BsrBI | CCGCTC | 1 cut(s) | 13 |
| BstBAI | YACGTR | 2 cut(s) | 25, 77 |
| BstC8I | GCNNGC | 1 cut(s) | 32 |
| BstEII | GGTNACC | 1 cut(s) | 16 |
| BstF5I | GGATG | 1 cut(s) | 129 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 48, 103 |
| BstNSI | RCATGY | 2 cut(s) | 34, 104 |
| BstPI | GGTNACC | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 81 |
| BsuRI | GGCC | 1 cut(s) | 42 |
| BtrI | CACGTC | 1 cut(s) | 57 |
| BtsCI | GGATG | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 1 cut(s) | 150 |
| CviAII | CATG | 3 cut(s) | 31, 101, 137 |
| CviJI | RGCY | 3 cut(s) | 42, 51, 85 |
| CviKI_1 | RGCY | 3 cut(s) | 42, 51, 85 |
| EaeI | YGGCCR | 1 cut(s) | 40 |
| Eco24I | GRGCYC | 1 cut(s) | 53 |
| Eco47I | GGWCC | 1 cut(s) | 150 |
| Eco72I | CACGTG | 2 cut(s) | 25, 77 |
| Eco91I | GGTNACC | 1 cut(s) | 16 |
| EcoO109I | RGGNCCY | 1 cut(s) | 150 |
| EcoO65I | GGTNACC | 1 cut(s) | 16 |
| EcoT38I | GRGCYC | 1 cut(s) | 53 |
| FaeI | CATG | 3 cut(s) | 34, 104, 140 |
| FaiI | YATR | 8 cut(s) | 32, 82, 102, 125, 127, 138, 161, 169 |
| FaqI | GGGAC | 1 cut(s) | 163 |
| FatI | CATG | 3 cut(s) | 30, 100, 136 |
| FauI | CCCGC | 2 cut(s) | 6, 99 |
| FokI | GGATG | 1 cut(s) | 116 |
| FriOI | GRGCYC | 1 cut(s) | 53 |
| HaeIII | GGCC | 1 cut(s) | 42 |
| Hin1II | CATG | 3 cut(s) | 34, 104, 140 |
| HphI | GGTGA | 1 cut(s) | 51 |
| Hpy166II | GTNNAC | 1 cut(s) | 74 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy8I | GTNNAC | 1 cut(s) | 74 |
| HpyCH4IV | ACGT | 3 cut(s) | 24, 56, 76 |
| HpyCH4V | TGCA | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 48, 103 |
| HpySE526I | ACGT | 3 cut(s) | 24, 56, 76 |
| Hsp92II | CATG | 3 cut(s) | 34, 104, 140 |
| LmnI | GCTCC | 1 cut(s) | 56 |
| MaeII | ACGT | 3 cut(s) | 24, 56, 76 |
| MaeIII | GTNAC | 2 cut(s) | 16, 57 |
| MbiI | CCGCTC | 1 cut(s) | 13 |
| MhlI | GDGCHC | 1 cut(s) | 53 |
| MluCI | AATT | 1 cut(s) | 91 |
| MslI | CAYNNNNRTG | 1 cut(s) | 79 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 48, 103 |
| NlaIII | CATG | 3 cut(s) | 34, 104, 140 |
| NlaIV | GGNNCC | 2 cut(s) | 52, 151 |
| NmuCI | GTSAC | 1 cut(s) | 57 |
| NspI | RCATGY | 2 cut(s) | 34, 104 |
| PaeI | GCATGC | 1 cut(s) | 34 |
| PciI | ACATGT | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 53 |
| PmaCI | CACGTG | 2 cut(s) | 25, 77 |
| PmlI | CACGTG | 2 cut(s) | 25, 77 |
| Ppu21I | YACGTR | 2 cut(s) | 25, 77 |
| PpuMI | RGGWCCY | 1 cut(s) | 150 |
| PscI | ACATGT | 1 cut(s) | 100 |
| PsiI | TTATAA | 1 cut(s) | 169 |
| Psp5II | RGGWCCY | 1 cut(s) | 150 |
| PspCI | CACGTG | 2 cut(s) | 25, 77 |
| PspEI | GGTNACC | 1 cut(s) | 16 |
| PspN4I | GGNNCC | 2 cut(s) | 52, 151 |
| PspPI | GGNCC | 1 cut(s) | 150 |
| PspPPI | RGGWCCY | 1 cut(s) | 150 |
| RseI | CAYNNNNRTG | 1 cut(s) | 79 |
| Sau96I | GGNCC | 1 cut(s) | 150 |
| SduI | GDGCHC | 1 cut(s) | 53 |
| SetI | ASST | 4 cut(s) | 27, 59, 79, 155 |
| SinI | GGWCC | 1 cut(s) | 150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 79 |
| SphI | GCATGC | 1 cut(s) | 34 |
| Sse9I | AATT | 1 cut(s) | 91 |
| SsiI | CCGC | 2 cut(s) | 13, 106 |
| TaiI | ACGT | 3 cut(s) | 27, 59, 79 |
| TasI | AATT | 1 cut(s) | 91 |
| TseFI | GTSAC | 1 cut(s) | 57 |
| Tsp45I | GTSAC | 1 cut(s) | 57 |
| VpaK11BI | GGWCC | 1 cut(s) | 150 |
| XapI | RAATTY | 1 cut(s) | 91 |
| XceI | RCATGY | 2 cut(s) | 34, 104 |