Translocase of chloroplast
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g06361 |
| malus_domestica | MD08G1226000.v1.1 |
| pyrus_communis | pycom05g24160 |
| rosa_chinensis | RchiOBHm_Chr2g0159691 RchiOBHm_Chr2g0168161 RchiOBHm_Chr4g0433811 RchiOBHm_Chr5g0018671 RchiOBHm_Chr5g0082331 |
| rosa_multiflora | Rmu_sc0000698.1_g000050 |
| rosa_roxburghii | Rroxscaffold_1G00019890 Rroxscaffold_1G00030050 Rroxscaffold_1G00032950 Rroxscaffold_5G00335810 Rroxscaffold_5G00345660 Rroxscaffold_5G00345670 Rroxscaffold_6G00401880 Rroxscaffold_6G00401890 Rroxscaffold_7G00194550 |
| rosa_rugosa | Rorug04G0046200 Rorug04G0124800 Rorug04G0335500 Rorug04G0429300 Rorug05G0081300 Rorug05G0117900 Rorug05G0181600 Rorug05G0438900 Rorug05G0452900 Rorug05G0506200.1 Rorug06G0093700 Rorug06G0458300 Rorug07G0106200 Rorug07G0121100 |
| rosa_samantha | Rh2DG566900 Rh3CG025900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 158 |
| AccBSI | CCGCTC | 1 cut(s) | 51 |
| AciI | CCGC | 2 cut(s) | 49, 176 |
| AcoI | YGGCCR | 1 cut(s) | 413 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AjnI | CCWGG | 1 cut(s) | 369 |
| AleI | CACNNNNGTG | 1 cut(s) | 29 |
| AluBI | AGCT | 1 cut(s) | 392 |
| AluI | AGCT | 1 cut(s) | 392 |
| Alw26I | GTCTC | 2 cut(s) | 150, 193 |
| AoxI | GGCC | 2 cut(s) | 413, 491 |
| ApeKI | GCWGC | 2 cut(s) | 62, 392 |
| BbvI | GCAGC | 2 cut(s) | 74, 379 |
| BccI | CCATC | 3 cut(s) | 200, 314, 483 |
| BciT130I | CCWGG | 1 cut(s) | 371 |
| BcoDI | GTCTC | 2 cut(s) | 150, 193 |
| BfaI | CTAG | 1 cut(s) | 167 |
| BisI | GCNGC | 2 cut(s) | 63, 393 |
| BlsI | GCNGC | 2 cut(s) | 64, 394 |
| Bme1390I | CCNGG | 1 cut(s) | 371 |
| BmrFI | CCNGG | 1 cut(s) | 371 |
| BmsI | GCATC | 1 cut(s) | 163 |
| BpmI | CTGGAG | 1 cut(s) | 417 |
| BsaJI | CCNNGG | 1 cut(s) | 57 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseBI | CCWGG | 1 cut(s) | 371 |
| BseDI | CCNNGG | 1 cut(s) | 57 |
| BseGI | GGATG | 4 cut(s) | 68, 178, 241, 494 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseMII | CTCAG | 1 cut(s) | 333 |
| BseXI | GCAGC | 2 cut(s) | 74, 379 |
| BshFI | GGCC | 2 cut(s) | 415, 493 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BsmAI | GTCTC | 2 cut(s) | 150, 193 |
| BsmBI | CGTCTC | 1 cut(s) | 150 |
| BsnI | GGCC | 2 cut(s) | 415, 493 |
| Bsp143I | GATC | 1 cut(s) | 400 |
| BspACI | CCGC | 2 cut(s) | 49, 176 |
| BspANI | GGCC | 2 cut(s) | 415, 493 |
| BspCNI | CTCAG | 1 cut(s) | 334 |
| BsrBI | CCGCTC | 1 cut(s) | 51 |
| BssECI | CCNNGG | 1 cut(s) | 57 |
| BssMI | GATC | 1 cut(s) | 400 |
| Bst2UI | CCWGG | 1 cut(s) | 371 |
| BstDEI | CTNAG | 1 cut(s) | 342 |
| BstF5I | GGATG | 4 cut(s) | 68, 178, 241, 494 |
| BstKTI | GATC | 1 cut(s) | 403 |
| BstMAI | GTCTC | 2 cut(s) | 150, 193 |
| BstMBI | GATC | 1 cut(s) | 400 |
| BstNI | CCWGG | 1 cut(s) | 371 |
| BstSCI | CCNGG | 1 cut(s) | 369 |
| BstV1I | GCAGC | 2 cut(s) | 74, 379 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 31 |
| BsuRI | GGCC | 2 cut(s) | 415, 493 |
| BtsCI | GGATG | 4 cut(s) | 68, 178, 241, 494 |
| CseI | GACGC | 2 cut(s) | 54, 132 |
| CviAII | CATG | 1 cut(s) | 248 |
| DdeI | CTNAG | 1 cut(s) | 342 |
| DpnI | GATC | 1 cut(s) | 402 |
| DpnII | GATC | 1 cut(s) | 400 |
| EaeI | YGGCCR | 1 cut(s) | 413 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| EcoRII | CCWGG | 1 cut(s) | 369 |
| Esp3I | CGTCTC | 1 cut(s) | 150 |
| FaeI | CATG | 1 cut(s) | 251 |
| FaiI | YATR | 5 cut(s) | 154, 156, 249, 408, 421 |
| FatI | CATG | 1 cut(s) | 247 |
| FauI | CCCGC | 1 cut(s) | 56 |
| FauNDI | CATATG | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 2 cut(s) | 63, 393 |
| FokI | GGATG | 3 cut(s) | 55, 185, 248 |
| Fsp4HI | GCNGC | 2 cut(s) | 63, 393 |
| FspBI | CTAG | 1 cut(s) | 167 |
| GluI | GCNGC | 2 cut(s) | 63, 393 |
| GsuI | CTGGAG | 1 cut(s) | 417 |
| HaeIII | GGCC | 2 cut(s) | 415, 493 |
| HgaI | GACGC | 2 cut(s) | 54, 132 |
| Hin1II | CATG | 1 cut(s) | 251 |
| HinfI | GANTC | 3 cut(s) | 85, 133, 262 |
| Hpy166II | GTNNAC | 1 cut(s) | 310 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 147 |
| Hpy8I | GTNNAC | 1 cut(s) | 310 |
| HpyAV | CCTTC | 1 cut(s) | 355 |
| HpyF3I | CTNAG | 1 cut(s) | 342 |
| Hsp92II | CATG | 1 cut(s) | 251 |
| Kzo9I | GATC | 1 cut(s) | 400 |
| LpnPI | CCDG | 6 cut(s) | 213, 342, 356, 381, 383, 414 |
| Lsp1109I | GCAGC | 2 cut(s) | 74, 379 |
| LweI | GCATC | 1 cut(s) | 163 |
| MaeI | CTAG | 1 cut(s) | 167 |
| MalI | GATC | 1 cut(s) | 402 |
| MbiI | CCGCTC | 1 cut(s) | 51 |
| MboI | GATC | 1 cut(s) | 400 |
| MboII | GAAGA | 2 cut(s) | 112, 417 |
| MluCI | AATT | 3 cut(s) | 138, 268, 294 |
| MlyI | GAGTC | 2 cut(s) | 79, 127 |
| MmeI | TCCRAC | 1 cut(s) | 113 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspR9I | CCNGG | 1 cut(s) | 371 |
| MvaI | CCWGG | 1 cut(s) | 371 |
| NdeI | CATATG | 1 cut(s) | 154 |
| NdeII | GATC | 1 cut(s) | 400 |
| NlaIII | CATG | 1 cut(s) | 251 |
| NmeAIII | GCCGAG | 2 cut(s) | 38, 391 |
| OliI | CACNNNNGTG | 1 cut(s) | 29 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 262 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 158 |
| PkrI | GCNGC | 2 cut(s) | 64, 394 |
| PleI | GAGTC | 2 cut(s) | 79, 127 |
| PpsI | GAGTC | 2 cut(s) | 79, 127 |
| Psp6I | CCWGG | 1 cut(s) | 369 |
| PspGI | CCWGG | 1 cut(s) | 369 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SatI | GCNGC | 2 cut(s) | 63, 393 |
| Sau3AI | GATC | 1 cut(s) | 400 |
| SchI | GAGTC | 2 cut(s) | 79, 127 |
| ScrFI | CCNGG | 1 cut(s) | 371 |
| SfaNI | GCATC | 1 cut(s) | 163 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| Sse9I | AATT | 3 cut(s) | 138, 268, 294 |
| SsiI | CCGC | 2 cut(s) | 49, 176 |
| SspMI | CTAG | 1 cut(s) | 167 |
| StyD4I | CCNGG | 1 cut(s) | 369 |
| TaqI | TCGA | 3 cut(s) | 98, 148, 224 |
| TasI | AATT | 3 cut(s) | 138, 268, 294 |
| TfiI | GAWTC | 1 cut(s) | 262 |
| TseI | GCWGC | 2 cut(s) | 62, 392 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 158 |
| XspI | CTAG | 1 cut(s) | 167 |