Rorug04G0046200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0003949
Physical Location & Seq
Forward (+)
7178285 .. 7208905
30621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0046200.1

Sequence Viewer

Length: 3162 bp
ATGGCACAAAAGGCAAGTTCACATGTGGGAGTTTGCAGGAAGTTCAAGCCTCACTTCCTCATGGTTTTAGCTCAAATGGGCTACACATTTCTTTATTTTATCACAGAAGCTTCCTTCAATCATGGGATGAACCCTCATGTCTATATTACTTATCGGCATATTGTTTCCGGCGTAGTGATGCTCCCTTTTGCCTATTTTCTTGAAAGAAAAGAAAGACCGAAGCTCACATTTGCCCTTTTCTTGGAACTTTTTGTTCTTTCTCTTCTGGGGGTGGGTTTGACTTTAAACATGTACTTTGCAAGCTTAAGATACACCTCTCCAACCTTCCTTGCATCAATGGTCAACACAATAGCTTCTGTCACTTTCGTAATTGCCGTTGCCCTCAGGTTGGAGGCTCTTAATCTTCGAAATCCTCGTGGGTTAGCAAAAGTTTTGGGCACCCTAGTCTCTTTAGCAGGAGTAATGACCATGACTTTGTACAAGGGACCTACTGTGAGAAATCTATGGAGTCCACTAATCCATATTGAAGGAAAATCCTCCATCCATGAGAACTGGTTGAAGGGTTCAATTCTCACTGTTGCTAGCTGCATAACTTGGTCTGTCTGGTACATTATGCAGGCAATCACGTTGAAAAGATATCCTGCACAACTGTCACTGACTACATGGATGAGCTTCATAGGGGCAGCACAGTCAGCTGTGTTCACTGTGTGTATTGAACATAGACGAGCTGCTTGGACCGTTGGATTCAACATTGACCTCTGGTCCATTCTGTACGCCGGAGTGGTGTGCTCTGGTCTAGTAATCTTCATTCAACTATGGTGCACAGAAGAAAAAGGACCAGTCTTTGTGACCATGTTCAATCCTGTTTCAACAATCTTGGTGGCAATTCTAGCATACTTTGTGCTCGGTGAAAGACTTTACATCGGCAGCATATTAGGGGCAGCGATTGTCATTGTTGGCCTATACTTCTTGTTGTGGGGGAAAGAAGGTGACGAAGTTTACATCATTAAGTGTGAAGACTCATCTTATCAGACATACGAAAAGGAGAAGATGACAGAATACGAACAATCACTTCAGTCAAGAAGGATCATTACATGGCCACAGCTCATCGGCAATGCTGTGATGAGGTCAATTGCACAGCTCTTCTGGCCACGAATTGGTCTACCAGCTTGTCAAGAACTGAAACAGGATAAGGAAGAAGAGGGAAGAGAGGAGCTTATGGCACAAGAGCCAAGTTCCCATGTGGGAACTTACAAGAGGTTCAAGCCACACCTCCTCATGGTTTTATCTCAAGTGGCCTACGCATTTCTCTATTTCATTACTGAAGCTTCCTTCAATCATGGGATGAACCCTCATGTCTACATAACTTATCGACATATCGTGTCTGGCATAATCATGCTCCCTTTTGCCTATTTTCTTGAAAGCAGAAAAGACAGACCAAAGCTCACATTTGCGGTTTTCTTGGAATTTTTCCTTATTTCTTTTCTGGGGATAGGTTTGACTTTAAACCTGTACTATGCAAGCTTAAGATACACCTCTCCAACCTTCCTTGCATCAATGATCAACACCGTAGCTTCCCTCACTTTTGTGATTGCAGTTTCACTCAAGTTGGAGGTTCTTGATCTTCGAAATCCTCGCGGATTAGCAAAAGTTTTGGGCACCGTAGTCTCCTTAGCCGGTGTAATGACCATGACTTTGTACAAAGGACCTATTATGAGAAATTTATGGAGTCCACTAATCCATATTCAAGGAAAATCTTCCATCCATGAGAACAGGTTGAAGGGTTCAATTCTAACTGTTGCTAGCTGCATAACATGGTCTTTATGGTACATTATGCAGGCAATCACATTGAAAAGATATCCTGCAAAACTATCACTGACAACATGGATGAGCTTCCTAGGGGCAGCACAGTCAGCTGTCTTTGCAGTTTGTATAGAACATAAACGAGTTGCTTGGACAGTTGGATTCAAGATTGACCTCTGGTGCATTTTGTATTCTCTACCAGCTTGTCAAGAACTGAAACAGGACAAGGAAGAAGAGGGACGAGAGGAGCTTATGGCACAAGAGCCAAGTTCCCATGTGGGAACTTACAAGAGGTTCAAGCCACACCTCCTCATGGTTTTATCTCAAGTGGCCTACGCATTTCTCTATTTCATTACAGAAGCTTCCTTCAATCATGGGATGAACCCTCATGTCTACATAACTTATCGACATATCGTGTCTGGCATAATCATGCTCCCTTTTGCCTATTTTCTTGAAAGAAAAGACAGACCAAAGCTCACATTTGCTCTTTTCTTGGAACTTTTTGTTATTTCTTTTCTGGGGATAGGTTTGACTTTAAACATGTACTTTGCAAGCTTAAGATACACCTCTCCAACCTTCCTTGCATCAATGATCAACACCATAGCTTCCCTCACTTTTGTGATTGCAGTTTCACTCAAGTTGGAGGTTCTTGATCTTCGAAATCCTCGTGGATTAGCAAAAGTTTTGGGCACCGTAGTCTCCTTAGCCGGTGTAATGACCATGACTTTGTACAAAGGACCTATTATGAGAAACTTGTGGAGTCCACTAATCCATATTCAAGGAAAAACTTCCATCCATGAGAACTGGTTGAAGGGTTCAATTCTAACTGTTGCTAGCTGCATAACATGGTCTTTATGGTACATTATGCAGGCAGTCACATTGAAAAGATATCCTGCACAACTATCAATGATAACATGGATGAGCTTCCTAGGGGCAGCACAGTCAGCTGTCTTTGCAGTTTGTATAGAACATAAACGAGCTGCTTGGACAGTTGGATTCAACATTGACCTCTGGTGCATTTTGTATTCTGGAGGGGTGTGCTCTGGCCTAATACTCTTTATTCAACTGTGGTGCACAGTAGAGAAAGGACCTGTCTTTGTGACCATGTTTGATCCCGTCTCAACAATATTGGTGGCAATTCTAGCATACTTTGTGCTAGGTGAAAGACTCTATATTGGCAGCATAGTAGGCGCAGCTATTGTCATTGTTGGCCTATACTTGCTGTTGTGGGGAAAAGAAGGTGACGAAGTTTACACCACTAAGTCTGAAGAGTCTGATCAGACAAATGAAGAGGAAAAAGATAACAATATGCCGACGATTTCTTCAGTCAAGAAGGATGCATTACATGATCAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1053

Amino Acids

118.9

Weight (kDa)

9.08

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 19 - 157 2.4e-08 EamA-like transporter family
EamA PF00892 187 - 325 3.7e-14 EamA-like transporter family
EamA PF00892 424 - 564 2e-09 EamA-like transporter family
EamA PF00892 703 - 842 9.3e-10 EamA-like transporter family
EamA PF00892 872 - 1010 2.1e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 437, 1658, 2492
AccB7I CCANNNNNTGG 1 cut(s) 1157
AccI GTMKAC 3 cut(s) 1162, 1359, 2196
AccII CGCG 1 cut(s) 1638
AciI CCGC 2 cut(s) 1454, 1638
AclWI GGATC 2 cut(s) 1094, 2909
AcoI YGGCCR 2 cut(s) 1097, 1148
AcsI RAATTY 2 cut(s) 1466, 1720
AcuI CTGAAG 4 cut(s) 1058, 1344, 3090, 3111
AdeI CACNNNGTG 1 cut(s) 708
AfiI CCNNNNNNNGG 5 cut(s) 241, 388, 1157, 1279, 2116
AflII CTTAAG 3 cut(s) 304, 1525, 2359
AflIII ACRYGT 3 cut(s) 22, 288, 2343
AhdI GACNNNNNGTC 1 cut(s) 760
AleI CACNNNNGTG 2 cut(s) 1586, 2420
Alw21I GWGCWC 5 cut(s) 791, 824, 906, 2846, 2879
Alw26I GTCTC 4 cut(s) 451, 1672, 2506, 2926
Alw44I GTGCAC 2 cut(s) 820, 2875
AlwI GGATC 2 cut(s) 1094, 2909
AoxI GGCC 7 cut(s) 958, 1097, 1148, 1296, 2133, 2848, 3013
ApaLI GTGCAC 2 cut(s) 820, 2875
ApoI RAATTY 2 cut(s) 1466, 1720
ArsI GACNNNNNNTTYG 6 cut(s) 457, 489, 1678, 1710, 2512, 2544
Asp700I GAANNNNTTC 2 cut(s) 1756, 2590
AspA2I CCTAGG 2 cut(s) 1897, 2731
AspLEI GCGC 1 cut(s) 2996
AspS9I GGNCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
AsuHPI GGTGA 4 cut(s) 920, 1001, 2975, 3056
AsuII TTCGAA 3 cut(s) 406, 1627, 2461
AsuNHI GCTAGC 3 cut(s) 581, 1802, 2636
AvaII GGWCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
AvrII CCTAGG 2 cut(s) 1897, 2731
AxyI CCTNAGG 1 cut(s) 383
BaeGI GKGCMC 5 cut(s) 440, 824, 1661, 2495, 2879
BalI TGGCCA 2 cut(s) 1099, 1150
BanI GGYRCC 3 cut(s) 437, 1658, 2492
BarI GAAGNNNNNNTAC 2 cut(s) 1075, 1107
BauI CACGAG 2 cut(s) 414, 2469
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 5 cut(s) 791, 824, 906, 2846, 2879
BccI CCATC 3 cut(s) 548, 1769, 2603
BceAI ACGGC 1 cut(s) 359
BclI TGATCA 4 cut(s) 1560, 2394, 3079, 3151
BcoDI GTCTC 4 cut(s) 451, 1672, 2506, 2926
BfrI CTTAAG 3 cut(s) 304, 1525, 2359
BlnI CCTAGG 2 cut(s) 1897, 2731
Bme18I GGWCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
BmeRI GACNNNNNGTC 1 cut(s) 760
BmgT120I GGNCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
BmiI GGNNCC 4 cut(s) 439, 486, 1660, 2494
BmsI GCATC 5 cut(s) 168, 341, 1562, 2396, 3130
BmtI GCTAGC 3 cut(s) 585, 1806, 2640
BpiI GAAGAC 1 cut(s) 1023
BpmI CTGGAG 1 cut(s) 2853
Bpu10I CCTNAGC 2 cut(s) 1672, 2506
Bpu14I TTCGAA 3 cut(s) 406, 1627, 2461
BpuEI CTTGAG 4 cut(s) 1275, 1589, 2112, 2423
BsaJI CCNNGG 2 cut(s) 1897, 2731
Bsc4I CCNNNNNNNGG 5 cut(s) 241, 388, 1157, 1279, 2116
Bse118I RCCGGY 2 cut(s) 1676, 2510
Bse1I ACTGG 3 cut(s) 557, 839, 2612
Bse21I CCTNAGG 1 cut(s) 383
Bse3DI GCAATG 1 cut(s) 1120
BseDI CCNNGG 2 cut(s) 1897, 2731
BseLI CCNNNNNNNGG 5 cut(s) 241, 388, 1157, 1279, 2116
BseMI GCAATG 1 cut(s) 1120
BseMII CTCAG 1 cut(s) 397
BseNI ACTGG 3 cut(s) 557, 839, 2612
BseRI GAGGAG 4 cut(s) 1226, 1265, 2063, 2102
BseSI GKGCMC 5 cut(s) 440, 824, 1661, 2495, 2879
BsgI GTGCAG 2 cut(s) 627, 2682
Bsh1236I CGCG 1 cut(s) 1638
BshFI GGCC 7 cut(s) 960, 1099, 1150, 1298, 2135, 2850, 3015
BshNI GGYRCC 3 cut(s) 437, 1658, 2492
BsiHKAI GWGCWC 5 cut(s) 791, 824, 906, 2846, 2879
BsiSI CCGG 4 cut(s) 168, 777, 1677, 2511
BslFI GGGAC 2 cut(s) 498, 2055
BslI CCNNNNNNNGG 5 cut(s) 241, 388, 1157, 1279, 2116
BsmAI GTCTC 4 cut(s) 451, 1672, 2506, 2926
BsmBI CGTCTC 1 cut(s) 2926
BsmFI GGGAC 2 cut(s) 498, 2055
BsnI GGCC 7 cut(s) 960, 1099, 1150, 1298, 2135, 2850, 3015
Bsp119I TTCGAA 3 cut(s) 406, 1627, 2461
Bsp1286I GDGCHC 8 cut(s) 440, 791, 824, 906, 1661, 2495, 2846, 2879
Bsp1407I TGTACA 3 cut(s) 477, 1698, 2532
Bsp143I GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
BspACI CCGC 2 cut(s) 1454, 1638
BspANI GGCC 7 cut(s) 960, 1099, 1150, 1298, 2135, 2850, 3015
BspCNI CTCAG 1 cut(s) 396
BspFNI CGCG 1 cut(s) 1638
BspLI GGNNCC 4 cut(s) 439, 486, 1660, 2494
BspOI GCTAGC 3 cut(s) 585, 1806, 2640
BspPI GGATC 2 cut(s) 1094, 2909
BspQI GCTCTTC 1 cut(s) 1148
BspT104I TTCGAA 3 cut(s) 406, 1627, 2461
BspT107I GGYRCC 3 cut(s) 437, 1658, 2492
BspTI CTTAAG 3 cut(s) 304, 1525, 2359
BsrDI GCAATG 1 cut(s) 1120
BsrFI RCCGGY 2 cut(s) 1676, 2510
BsrGI TGTACA 3 cut(s) 477, 1698, 2532
BsrI ACTGG 3 cut(s) 557, 839, 2612
BssAI RCCGGY 2 cut(s) 1676, 2510
BssECI CCNNGG 2 cut(s) 1897, 2731
BssMI GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
BssSI CACGAG 2 cut(s) 414, 2469
BssT1I CCWWGG 2 cut(s) 1897, 2731
Bst2BI CACGAG 2 cut(s) 414, 2469
Bst6I CTCTTC 7 cut(s) 267, 1148, 1194, 1201, 2031, 3066, 3087
BstAFI CTTAAG 3 cut(s) 304, 1525, 2359
BstAUI TGTACA 3 cut(s) 477, 1698, 2532
BstBI TTCGAA 3 cut(s) 406, 1627, 2461
BstC8I GCNNGC 9 cut(s) 301, 583, 618, 1522, 1804, 1839, 2356, 2638, 2673
BstDEI CTNAG 4 cut(s) 383, 1672, 2506, 3063
BstFNI CGCG 1 cut(s) 1638
BstHHI GCGC 1 cut(s) 2996
BstKTI GATC 8 cut(s) 1089, 1563, 1624, 2397, 2458, 2917, 3082, 3154
BstMAI GTCTC 4 cut(s) 451, 1672, 2506, 2926
BstMBI GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
BstNSI RCATGY 3 cut(s) 26, 292, 2347
BstSLI GKGCMC 5 cut(s) 440, 824, 1661, 2495, 2879
BstUI CGCG 1 cut(s) 1638
BstV2I GAAGAC 1 cut(s) 1023
Bsu36I CCTNAGG 1 cut(s) 383
BsuRI GGCC 7 cut(s) 960, 1099, 1150, 1298, 2135, 2850, 3015
BtsIMutI CAGTG 4 cut(s) 573, 653, 702, 1874
Cac8I GCNNGC 9 cut(s) 301, 583, 618, 1522, 1804, 1839, 2356, 2638, 2673
CfoI GCGC 1 cut(s) 2996
Cfr10I RCCGGY 2 cut(s) 1676, 2510
Cfr13I GGNCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
CspCI CAANNNNNGTGG 4 cut(s) 861, 896, 2916, 2951
DdeI CTNAG 4 cut(s) 383, 1672, 2506, 3063
DpnI GATC 8 cut(s) 1088, 1562, 1623, 2396, 2457, 2916, 3081, 3153
DpnII GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
DraI TTTAAA 3 cut(s) 285, 1506, 2340
DraIII CACNNNGTG 1 cut(s) 708
DriI GACNNNNNGTC 1 cut(s) 760
EaeI YGGCCR 2 cut(s) 1097, 1148
Eam1104I CTCTTC 7 cut(s) 267, 1148, 1194, 1201, 2031, 3066, 3087
Eam1105I GACNNNNNGTC 1 cut(s) 760
EarI CTCTTC 7 cut(s) 267, 1148, 1194, 1201, 2031, 3066, 3087
Eco130I CCWWGG 2 cut(s) 1897, 2731
Eco32I GATATC 3 cut(s) 638, 1859, 2693
Eco47I GGWCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
Eco57I CTGAAG 4 cut(s) 1058, 1344, 3090, 3111
Eco81I CCTNAGG 1 cut(s) 383
EcoO109I RGGNCCY 4 cut(s) 485, 1706, 2540, 2891
EcoRV GATATC 3 cut(s) 638, 1859, 2693
EcoT14I CCWWGG 2 cut(s) 1897, 2731
EcoT22I ATGCAT 1 cut(s) 3145
ErhI CCWWGG 2 cut(s) 1897, 2731
Esp3I CGTCTC 1 cut(s) 2926
FalI AAGNNNNNCTT 2 cut(s) 38, 70
FaqI GGGAC 2 cut(s) 498, 2055
FbaI TGATCA 4 cut(s) 1560, 2394, 3079, 3151
FblI GTMKAC 3 cut(s) 1162, 1359, 2196
GlaI GCGC 1 cut(s) 2995
GsuI CTGGAG 1 cut(s) 2853
HaeIII GGCC 7 cut(s) 960, 1099, 1150, 1298, 2135, 2850, 3015
HapII CCGG 4 cut(s) 168, 777, 1677, 2511
HhaI GCGC 1 cut(s) 2996
Hin6I GCGC 1 cut(s) 2994
HinP1I GCGC 1 cut(s) 2994
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 6 cut(s) 108, 301, 1326, 1522, 2163, 2356
HinfI GANTC 9 cut(s) 508, 744, 1019, 1729, 1965, 2563, 2799, 2970, 3074
HpaII CCGG 4 cut(s) 168, 777, 1677, 2511
HphI GGTGA 4 cut(s) 920, 1001, 2975, 3056
Hpy188I TCNGA 4 cut(s) 1032, 3070, 3079, 3084
Hpy99I CGWCG 1 cut(s) 3121
HpyCH4IV ACGT 1 cut(s) 626
HpyF3I CTNAG 4 cut(s) 383, 1672, 2506, 3063
HpySE526I ACGT 1 cut(s) 626
HspAI GCGC 1 cut(s) 2994
Ksp22I TGATCA 4 cut(s) 1560, 2394, 3079, 3151
Kzo9I GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
LguI GCTCTTC 1 cut(s) 1148
LmnI GCTCC 5 cut(s) 186, 1213, 1404, 2050, 2241
LweI GCATC 5 cut(s) 168, 341, 1562, 2396, 3130
MaeII ACGT 1 cut(s) 626
MaeIII GTNAC 7 cut(s) 358, 651, 847, 989, 2677, 2902, 3044
MalI GATC 8 cut(s) 1088, 1562, 1623, 2396, 2457, 2916, 3081, 3153
MboI GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
MfeI CAATTG 1 cut(s) 1131
MhlI GDGCHC 8 cut(s) 440, 791, 824, 906, 1661, 2495, 2846, 2879
MlsI TGGCCA 2 cut(s) 1099, 1150
MluNI TGGCCA 2 cut(s) 1099, 1150
MlyI GAGTC 6 cut(s) 517, 1013, 1738, 2572, 2964, 3083
MmeI TCCRAC 9 cut(s) 344, 369, 721, 1565, 1590, 1942, 2399, 2424, 2776
Mox20I TGGCCA 2 cut(s) 1099, 1150
Mph1103I ATGCAT 1 cut(s) 3145
MroXI GAANNNNTTC 2 cut(s) 1756, 2590
MscI TGGCCA 2 cut(s) 1099, 1150
MseI TTAA 8 cut(s) 284, 305, 399, 1008, 1505, 1526, 2339, 2360
MslI CAYNNNNRTG 4 cut(s) 1394, 1586, 2231, 2420
Msp20I TGGCCA 2 cut(s) 1099, 1150
MspA1I CMGCKG 3 cut(s) 695, 1916, 2750
MspCI CTTAAG 3 cut(s) 304, 1525, 2359
MspI CCGG 4 cut(s) 168, 777, 1677, 2511
MunI CAATTG 1 cut(s) 1131
MvnI CGCG 1 cut(s) 1638
NdeII GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
NheI GCTAGC 3 cut(s) 581, 1802, 2636
NlaIV GGNNCC 4 cut(s) 439, 486, 1660, 2494
NmuCI GTSAC 7 cut(s) 358, 651, 847, 989, 2677, 2902, 3044
NsiI ATGCAT 1 cut(s) 3145
NspI RCATGY 3 cut(s) 26, 292, 2347
NspV TTCGAA 3 cut(s) 406, 1627, 2461
OliI CACNNNNGTG 2 cut(s) 1586, 2420
PciI ACATGT 3 cut(s) 22, 288, 2343
PciSI GCTCTTC 1 cut(s) 1148
PcsI WCGNNNNNNNCGW 3 cut(s) 372, 412, 2467
PdmI GAANNNNTTC 2 cut(s) 1756, 2590
PfeI GAWTC 3 cut(s) 744, 1965, 2799
PflMI CCANNNNNTGG 1 cut(s) 1157
PleI GAGTC 6 cut(s) 516, 1013, 1737, 2571, 2964, 3082
PpsI GAGTC 6 cut(s) 516, 1013, 1737, 2571, 2964, 3082
PpuMI RGGWCCY 4 cut(s) 485, 1706, 2540, 2891
PscI ACATGT 3 cut(s) 22, 288, 2343
Psp5II RGGWCCY 4 cut(s) 485, 1706, 2540, 2891
PspN4I GGNNCC 4 cut(s) 439, 486, 1660, 2494
PspPI GGNCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
PspPPI RGGWCCY 4 cut(s) 485, 1706, 2540, 2891
PvuII CAGCTG 3 cut(s) 695, 1916, 2750
RseI CAYNNNNRTG 4 cut(s) 1394, 1586, 2231, 2420
SapI GCTCTTC 1 cut(s) 1148
SaqAI TTAA 8 cut(s) 284, 305, 399, 1008, 1505, 1526, 2339, 2360
Sau3AI GATC 8 cut(s) 1086, 1560, 1621, 2394, 2455, 2914, 3079, 3151
Sau96I GGNCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
SchI GAGTC 6 cut(s) 517, 1013, 1738, 2572, 2964, 3083
SduI GDGCHC 8 cut(s) 440, 791, 824, 906, 1661, 2495, 2846, 2879
SfaNI GCATC 5 cut(s) 168, 341, 1562, 2396, 3130
SfuI TTCGAA 3 cut(s) 406, 1627, 2461
SinI GGWCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
SmiMI CAYNNNNRTG 4 cut(s) 1394, 1586, 2231, 2420
SmlI CTYRAG 7 cut(s) 304, 1290, 1525, 1604, 2127, 2359, 2438
SmoI CTYRAG 7 cut(s) 304, 1290, 1525, 1604, 2127, 2359, 2438
SsiI CCGC 2 cut(s) 1454, 1638
SspI AATATT 1 cut(s) 2931
StyI CCWWGG 2 cut(s) 1897, 2731
TaiI ACGT 1 cut(s) 629
TaqI TCGA 5 cut(s) 406, 1372, 1627, 2209, 2461
TaqII GACCGA 1 cut(s) 232
TatI WGTACW 6 cut(s) 291, 477, 1512, 1698, 2346, 2532
TfiI GAWTC 3 cut(s) 744, 1965, 2799
Tru1I TTAA 8 cut(s) 284, 305, 399, 1008, 1505, 1526, 2339, 2360
Tru9I TTAA 8 cut(s) 284, 305, 399, 1008, 1505, 1526, 2339, 2360
TscAI CASTG 4 cut(s) 580, 660, 709, 1881
TseFI GTSAC 7 cut(s) 358, 651, 847, 989, 2677, 2902, 3044
Tsp45I GTSAC 7 cut(s) 358, 651, 847, 989, 2677, 2902, 3044
TspDTI ATGAA 8 cut(s) 143, 664, 796, 1306, 1361, 2143, 2198, 3105
TspRI CASTG 4 cut(s) 580, 660, 709, 1881
Van91I CCANNNNNTGG 1 cut(s) 1157
Vha464I CTTAAG 3 cut(s) 304, 1525, 2359
VneI GTGCAC 2 cut(s) 820, 2875
VpaK11BI GGWCC 7 cut(s) 485, 735, 762, 836, 1706, 2540, 2891
XapI RAATTY 2 cut(s) 1466, 1720
XceI RCATGY 3 cut(s) 26, 292, 2347
XmaJI CCTAGG 2 cut(s) 1897, 2731
XmiI GTMKAC 3 cut(s) 1162, 1359, 2196
XmnI GAANNNNTTC 2 cut(s) 1756, 2590
Zsp2I ATGCAT 1 cut(s) 3145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.