cysteine-rich RLK (RECEPTOR-like protein kinase) 8
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Pol_BBD | PF22936 | 47 - 123 | 5.6e-11 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 154 - 215 | 1.1e-09 | GAG-pre-integrase domain |
| rve | PF00665 | 233 - 328 | 4.3e-15 | Integrase core domain |
| SH3_retrovirus | PF25597 | 402 - 462 | 4.4e-21 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 719 - 962 | 3e-67 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 178 |
| Acc16I | TGCGCA | 1 cut(s) | 631 |
| Acc36I | ACCTGC | 1 cut(s) | 1381 |
| Acc65I | GGTACC | 1 cut(s) | 141 |
| AccB1I | GGYRCC | 4 cut(s) | 141, 155, 1915, 1948 |
| AccBSI | CCGCTC | 1 cut(s) | 3186 |
| AccII | CGCG | 2 cut(s) | 1345, 1545 |
| AclWI | GGATC | 6 cut(s) | 125, 589, 1927, 2309, 2751, 3282 |
| AcoI | YGGCCR | 1 cut(s) | 2127 |
| AcsI | RAATTY | 2 cut(s) | 1384, 2007 |
| AcuI | CTGAAG | 2 cut(s) | 1395, 2417 |
| AcyI | GRCGYC | 2 cut(s) | 1625, 1949 |
| AdeI | CACNNNGTG | 1 cut(s) | 2540 |
| AflIII | ACRYGT | 1 cut(s) | 1154 |
| AgeI | ACCGGT | 3 cut(s) | 152, 1325, 1753 |
| AgsI | TTSAA | 7 cut(s) | 748, 890, 2152, 2552, 2702, 2927, 3610 |
| AjiI | CACGTC | 1 cut(s) | 1157 |
| AjnI | CCWGG | 2 cut(s) | 22, 2461 |
| AleI | CACNNNNGTG | 1 cut(s) | 1605 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3333, 3365 |
| Alw21I | GWGCWC | 5 cut(s) | 1063, 1720, 2564, 2876, 3043 |
| Alw26I | GTCTC | 9 cut(s) | 467, 531, 726, 1163, 1316, 1632, 3107, 3232, 3305 |
| AlwI | GGATC | 6 cut(s) | 125, 589, 1927, 2309, 2751, 3282 |
| Ama87I | CYCGRG | 2 cut(s) | 1054, 1766 |
| ApaI | GGGCCC | 1 cut(s) | 449 |
| ApoI | RAATTY | 2 cut(s) | 1384, 2007 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2981, 3013 |
| AseI | ATTAAT | 2 cut(s) | 2064, 2139 |
| AsiGI | ACCGGT | 3 cut(s) | 152, 1325, 1753 |
| Asp718I | GGTACC | 1 cut(s) | 141 |
| AspA2I | CCTAGG | 1 cut(s) | 1222 |
| AspLEI | GCGC | 3 cut(s) | 632, 1547, 1951 |
| AsuC2I | CCSGG | 3 cut(s) | 146, 1937, 2237 |
| AsuII | TTCGAA | 2 cut(s) | 835, 2350 |
| AvaI | CYCGRG | 2 cut(s) | 1054, 1766 |
| AvaII | GGWCC | 5 cut(s) | 496, 820, 2166, 2750, 2779 |
| AvrII | CCTAGG | 1 cut(s) | 1222 |
| BaeGI | GKGCMC | 2 cut(s) | 449, 3133 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1218, 1251 |
| BanI | GGYRCC | 4 cut(s) | 141, 155, 1915, 1948 |
| BanII | GRGCYC | 2 cut(s) | 449, 2564 |
| BauI | CACGAG | 2 cut(s) | 1658, 3036 |
| BbsI | GAAGAC | 3 cut(s) | 474, 1264, 2445 |
| Bbv12I | GWGCWC | 5 cut(s) | 1063, 1720, 2564, 2876, 3043 |
| BbvCI | CCTCAGC | 1 cut(s) | 1080 |
| BceAI | ACGGC | 3 cut(s) | 1728, 2709, 2812 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1757, 1791 |
| BciT130I | CCWGG | 2 cut(s) | 24, 2463 |
| BciVI | GTATCC | 2 cut(s) | 1135, 2043 |
| BclI | TGATCA | 2 cut(s) | 1510, 2689 |
| BcnI | CCSGG | 3 cut(s) | 146, 1937, 2237 |
| BcoDI | GTCTC | 9 cut(s) | 467, 531, 726, 1163, 1316, 1632, 3107, 3232, 3305 |
| BfaI | CTAG | 6 cut(s) | 1223, 1251, 1479, 1631, 2376, 3092 |
| BfmI | CTRYAG | 2 cut(s) | 1577, 2320 |
| BfoI | RGCGCY | 1 cut(s) | 1952 |
| BfuAI | ACCTGC | 1 cut(s) | 1381 |
| BfuI | GTATCC | 2 cut(s) | 1135, 2043 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1031 |
| BlnI | CCTAGG | 1 cut(s) | 1222 |
| BlpI | GCTNAGC | 1 cut(s) | 473 |
| BmcAI | AGTACT | 1 cut(s) | 94 |
| Bme1390I | CCNGG | 5 cut(s) | 24, 146, 1937, 2237, 2463 |
| Bme18I | GGWCC | 5 cut(s) | 496, 820, 2166, 2750, 2779 |
| BmeT110I | CYCGRG | 2 cut(s) | 1054, 1766 |
| BmgBI | CACGTC | 1 cut(s) | 1157 |
| BmrFI | CCNGG | 5 cut(s) | 24, 146, 1937, 2237, 2463 |
| BmrI | ACTGGG | 2 cut(s) | 925, 3597 |
| BmsI | GCATC | 4 cut(s) | 960, 1801, 2704, 3142 |
| BmuI | ACTGGG | 2 cut(s) | 925, 3597 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1566 |
| BpiI | GAAGAC | 3 cut(s) | 474, 1264, 2445 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3019, 3051 |
| BpmI | CTGGAG | 4 cut(s) | 132, 378, 1707, 3250 |
| Bpu10I | CCTNAGC | 3 cut(s) | 544, 1080, 3594 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 473 |
| Bpu14I | TTCGAA | 2 cut(s) | 835, 2350 |
| BpuEI | CTTGAG | 1 cut(s) | 2801 |
| BpuMI | CCSGG | 3 cut(s) | 146, 1937, 2237 |
| Bsa29I | ATCGAT | 2 cut(s) | 1791, 3286 |
| BsaAI | YACGTR | 1 cut(s) | 422 |
| BsaBI | GATNNNNATC | 2 cut(s) | 402, 2916 |
| BsaHI | GRCGYC | 2 cut(s) | 1625, 1949 |
| BsaI | GGTCTC | 2 cut(s) | 467, 3107 |
| BsaWI | WCCGGW | 5 cut(s) | 152, 1325, 1753, 1819, 3415 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1631, 1661, 1819, 1849, 2443, 2473, 3054, 3084 |
| Bse118I | RCCGGY | 5 cut(s) | 152, 1325, 1753, 1879, 3164 |
| Bse3DI | GCAATG | 3 cut(s) | 1452, 3051, 3255 |
| Bse8I | GATNNNNATC | 2 cut(s) | 402, 2916 |
| BseBI | CCWGG | 2 cut(s) | 24, 2463 |
| BseCI | ATCGAT | 2 cut(s) | 1791, 3286 |
| BseJI | GATNNNNATC | 2 cut(s) | 402, 2916 |
| BseMI | GCAATG | 3 cut(s) | 1452, 3051, 3255 |
| BseMII | CTCAG | 9 cut(s) | 1071, 1497, 1793, 2105, 2204, 2259, 2468, 3403, 3585 |
| BseRI | GAGGAG | 9 cut(s) | 502, 547, 1053, 1137, 1710, 1806, 1890, 1914, 2147 |
| BseSI | GKGCMC | 2 cut(s) | 449, 3133 |
| BseYI | CCCAGC | 1 cut(s) | 1686 |
| BsgI | GTGCAG | 1 cut(s) | 1746 |
| Bsh1236I | CGCG | 2 cut(s) | 1345, 1545 |
| Bsh1285I | CGRYCG | 4 cut(s) | 1330, 1754, 1860, 1884 |
| BshNI | GGYRCC | 4 cut(s) | 141, 155, 1915, 1948 |
| BshTI | ACCGGT | 3 cut(s) | 152, 1325, 1753 |
| BshVI | ATCGAT | 2 cut(s) | 1791, 3286 |
| BsiEI | CGRYCG | 4 cut(s) | 1330, 1754, 1860, 1884 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1063, 1720, 2564, 2876, 3043 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1054, 1766 |
| BsiWI | CGTACG | 1 cut(s) | 2012 |
| BslFI | GGGAC | 7 cut(s) | 251, 482, 628, 1272, 2152, 2736, 3491 |
| BsmAI | GTCTC | 9 cut(s) | 467, 531, 726, 1163, 1316, 1632, 3107, 3232, 3305 |
| BsmBI | CGTCTC | 3 cut(s) | 531, 1163, 1632 |
| BsmFI | GGGAC | 7 cut(s) | 251, 482, 628, 1272, 2152, 2736, 3491 |
| BsmI | GAATGC | 2 cut(s) | 318, 2414 |
| Bso31I | GGTCTC | 2 cut(s) | 467, 3107 |
| BsoBI | CYCGRG | 2 cut(s) | 1054, 1766 |
| Bsp119I | TTCGAA | 2 cut(s) | 835, 2350 |
| Bsp120I | GGGCCC | 1 cut(s) | 445 |
| Bsp1286I | GDGCHC | 7 cut(s) | 449, 1063, 1720, 2564, 2876, 3043, 3133 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 473 |
| Bsp19I | CCATGG | 4 cut(s) | 2070, 2124, 2422, 3097 |
| BspCNI | CTCAG | 9 cut(s) | 1072, 1496, 1792, 2104, 2203, 2258, 2467, 3402, 3586 |
| BspDI | ATCGAT | 2 cut(s) | 1791, 3286 |
| BspFNI | CGCG | 2 cut(s) | 1345, 1545 |
| BspHI | TCATGA | 2 cut(s) | 2827, 3024 |
| BspMAI | CTGCAG | 1 cut(s) | 1581 |
| BspMI | ACCTGC | 1 cut(s) | 1381 |
| BspPI | GGATC | 6 cut(s) | 125, 589, 1927, 2309, 2751, 3282 |
| BspT104I | TTCGAA | 2 cut(s) | 835, 2350 |
| BspT107I | GGYRCC | 4 cut(s) | 141, 155, 1915, 1948 |
| BspTNI | GGTCTC | 2 cut(s) | 467, 3107 |
| BsrBI | CCGCTC | 1 cut(s) | 3186 |
| BsrDI | GCAATG | 3 cut(s) | 1452, 3051, 3255 |
| BsrFI | RCCGGY | 5 cut(s) | 152, 1325, 1753, 1879, 3164 |
| BssAI | RCCGGY | 5 cut(s) | 152, 1325, 1753, 1879, 3164 |
| BssNI | GRCGYC | 2 cut(s) | 1625, 1949 |
| BssSI | CACGAG | 2 cut(s) | 1658, 3036 |
| Bst2BI | CACGAG | 2 cut(s) | 1658, 3036 |
| Bst2UI | CCWGG | 2 cut(s) | 24, 2463 |
| Bst4CI | ACNGT | 4 cut(s) | 496, 872, 2356, 3380 |
| Bst6I | CTCTTC | 4 cut(s) | 61, 565, 688, 1437 |
| BstACI | GRCGYC | 2 cut(s) | 1625, 1949 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2540 |
| BstBAI | YACGTR | 1 cut(s) | 422 |
| BstBI | TTCGAA | 2 cut(s) | 835, 2350 |
| BstDSI | CCRYGG | 6 cut(s) | 492, 2070, 2124, 2422, 2725, 3097 |
| BstEII | GGTNACC | 1 cut(s) | 263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| BstFNI | CGCG | 2 cut(s) | 1345, 1545 |
| BstH2I | RGCGCY | 1 cut(s) | 1952 |
| BstHHI | GCGC | 3 cut(s) | 632, 1547, 1951 |
| BstMAI | GTCTC | 9 cut(s) | 467, 531, 726, 1163, 1316, 1632, 3107, 3232, 3305 |
| BstMCI | CGRYCG | 4 cut(s) | 1330, 1754, 1860, 1884 |
| BstNI | CCWGG | 2 cut(s) | 24, 2463 |
| BstNSI | RCATGY | 1 cut(s) | 1645 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1566 |
| BstPI | GGTNACC | 1 cut(s) | 263 |
| BstSCI | CCNGG | 5 cut(s) | 22, 144, 1935, 2235, 2461 |
| BstSFI | CTRYAG | 2 cut(s) | 1577, 2320 |
| BstSLI | GKGCMC | 2 cut(s) | 449, 3133 |
| BstSNI | TACGTA | 1 cut(s) | 422 |
| BstUI | CGCG | 2 cut(s) | 1345, 1545 |
| BstV2I | GAAGAC | 3 cut(s) | 474, 1264, 2445 |
| BstX2I | RGATCY | 2 cut(s) | 581, 2743 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3403 |
| BstYI | RGATCY | 2 cut(s) | 581, 2743 |
| Bsu15I | ATCGAT | 2 cut(s) | 1791, 3286 |
| BsuI | GTATCC | 2 cut(s) | 1135, 2043 |
| BsuTUI | ATCGAT | 2 cut(s) | 1791, 3286 |
| BtgI | CCRYGG | 6 cut(s) | 492, 2070, 2124, 2422, 2725, 3097 |
| BtgZI | GCGATG | 4 cut(s) | 1662, 1683, 1860, 2977 |
| BtrI | CACGTC | 1 cut(s) | 1157 |
| BtsI | GCAGTG | 1 cut(s) | 2692 |
| BtsIMutI | CAGTG | 8 cut(s) | 738, 1491, 1707, 2692, 2874, 3274, 3310, 3397 |
| BveI | ACCTGC | 1 cut(s) | 1381 |
| CciI | TCATGA | 2 cut(s) | 2827, 3024 |
| CfoI | GCGC | 3 cut(s) | 632, 1547, 1951 |
| Cfr10I | RCCGGY | 5 cut(s) | 152, 1325, 1753, 1879, 3164 |
| ClaI | ATCGAT | 2 cut(s) | 1791, 3286 |
| CseI | GACGC | 4 cut(s) | 794, 1334, 1614, 3578 |
| CspAI | ACCGGT | 3 cut(s) | 152, 1325, 1753 |
| DinI | GGCGCC | 1 cut(s) | 1950 |
| DraI | TTTAAA | 1 cut(s) | 2838 |
| DraIII | CACNNNGTG | 1 cut(s) | 2540 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 178 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 178 |
| EaeI | YGGCCR | 1 cut(s) | 2127 |
| Eam1104I | CTCTTC | 4 cut(s) | 61, 565, 688, 1437 |
| EarI | CTCTTC | 4 cut(s) | 61, 565, 688, 1437 |
| EciI | GGCGGA | 2 cut(s) | 667, 1955 |
| Ecl136II | GAGCTC | 1 cut(s) | 2562 |
| Eco105I | TACGTA | 1 cut(s) | 422 |
| Eco24I | GRGCYC | 2 cut(s) | 449, 2564 |
| Eco31I | GGTCTC | 2 cut(s) | 467, 3107 |
| Eco47I | GGWCC | 5 cut(s) | 496, 820, 2166, 2750, 2779 |
| Eco53kI | GAGCTC | 1 cut(s) | 2562 |
| Eco57I | CTGAAG | 2 cut(s) | 1395, 2417 |
| Eco88I | CYCGRG | 2 cut(s) | 1054, 1766 |
| Eco91I | GGTNACC | 1 cut(s) | 263 |
| EcoICRI | GAGCTC | 1 cut(s) | 2562 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| EcoO109I | RGGNCCY | 2 cut(s) | 445, 820 |
| EcoO65I | GGTNACC | 1 cut(s) | 263 |
| EcoRI | GAATTC | 1 cut(s) | 2007 |
| EcoRII | CCWGG | 2 cut(s) | 22, 2461 |
| EcoT22I | ATGCAT | 1 cut(s) | 2416 |
| EcoT38I | GRGCYC | 2 cut(s) | 449, 2564 |
| EgeI | GGCGCC | 1 cut(s) | 1950 |
| EheI | GGCGCC | 1 cut(s) | 1950 |
| Esp3I | CGTCTC | 3 cut(s) | 531, 1163, 1632 |
| FaqI | GGGAC | 7 cut(s) | 251, 482, 628, 1272, 2152, 2736, 3491 |
| FauI | CCCGC | 2 cut(s) | 2273, 2347 |
| FbaI | TGATCA | 2 cut(s) | 1510, 2689 |
| FriOI | GRGCYC | 2 cut(s) | 449, 2564 |
| FspBI | CTAG | 6 cut(s) | 1223, 1251, 1479, 1631, 2376, 3092 |
| FspI | TGCGCA | 1 cut(s) | 631 |
| GlaI | GCGC | 3 cut(s) | 631, 1546, 1950 |
| GsaI | CCCAGC | 1 cut(s) | 1690 |
| GsuI | CTGGAG | 4 cut(s) | 132, 378, 1707, 3250 |
| HaeII | RGCGCY | 1 cut(s) | 1952 |
| HgaI | GACGC | 4 cut(s) | 794, 1334, 1614, 3578 |
| HhaI | GCGC | 3 cut(s) | 632, 1547, 1951 |
| Hin1I | GRCGYC | 2 cut(s) | 1625, 1949 |
| Hin6I | GCGC | 3 cut(s) | 630, 1545, 1949 |
| HinP1I | GCGC | 3 cut(s) | 630, 1545, 1949 |
| HincII | GTYRAC | 3 cut(s) | 916, 2864, 3032 |
| HindII | GTYRAC | 3 cut(s) | 916, 2864, 3032 |
| HindIII | AAGCTT | 1 cut(s) | 2501 |
| Hpy188I | TCNGA | 8 cut(s) | 810, 1414, 1639, 1857, 1867, 1985, 3151, 3280 |
| Hpy99I | CGWCG | 2 cut(s) | 2474, 3518 |
| HpyCH4III | ACNGT | 4 cut(s) | 496, 872, 2356, 3380 |
| HpyCH4IV | ACGT | 5 cut(s) | 421, 1156, 2442, 3064, 3127 |
| HpySE526I | ACGT | 5 cut(s) | 421, 1156, 2442, 3064, 3127 |
| Hsp92I | GRCGYC | 2 cut(s) | 1625, 1949 |
| HspAI | GCGC | 3 cut(s) | 630, 1545, 1949 |
| KasI | GGCGCC | 1 cut(s) | 1948 |
| KpnI | GGTACC | 1 cut(s) | 145 |
| KroI | GCCGGC | 1 cut(s) | 3164 |
| KroNI | GCCGGC | 1 cut(s) | 3166 |
| Ksp22I | TGATCA | 2 cut(s) | 1510, 2689 |
| LweI | GCATC | 4 cut(s) | 960, 1801, 2704, 3142 |
| MaeI | CTAG | 6 cut(s) | 1223, 1251, 1479, 1631, 2376, 3092 |
| MaeII | ACGT | 5 cut(s) | 421, 1156, 2442, 3064, 3127 |
| MaeIII | GTNAC | 6 cut(s) | 263, 736, 938, 1745, 2255, 3015 |
| MbiI | CCGCTC | 1 cut(s) | 3186 |
| MfeI | CAATTG | 1 cut(s) | 1135 |
| MflI | RGATCY | 2 cut(s) | 581, 2743 |
| MhlI | GDGCHC | 7 cut(s) | 449, 1063, 1720, 2564, 2876, 3043, 3133 |
| Mly113I | GGCGCC | 1 cut(s) | 1949 |
| MlyI | GAGTC | 9 cut(s) | 123, 233, 935, 1969, 1974, 2446, 2597, 3037, 3496 |
| MmeI | TCCRAC | 4 cut(s) | 690, 979, 2817, 2957 |
| Mph1103I | ATGCAT | 1 cut(s) | 2416 |
| MroNI | GCCGGC | 1 cut(s) | 3164 |
| MseI | TTAA | 8 cut(s) | 609, 1110, 1359, 2064, 2139, 2226, 2739, 2837 |
| MslI | CAYNNNNRTG | 6 cut(s) | 708, 1605, 2879, 2913, 3303, 3401 |
| MspA1I | CMGCKG | 4 cut(s) | 1690, 2398, 3527, 3559 |
| MspR9I | CCNGG | 5 cut(s) | 24, 146, 1937, 2237, 2463 |
| MunI | CAATTG | 1 cut(s) | 1135 |
| Mva1269I | GAATGC | 2 cut(s) | 318, 2414 |
| MvaI | CCWGG | 2 cut(s) | 24, 2463 |
| MvnI | CGCG | 2 cut(s) | 1345, 1545 |
| NaeI | GCCGGC | 1 cut(s) | 3166 |
| NarI | GGCGCC | 1 cut(s) | 1949 |
| NciI | CCSGG | 3 cut(s) | 146, 1937, 2237 |
| NcoI | CCATGG | 4 cut(s) | 2070, 2124, 2422, 3097 |
| NgoMIV | GCCGGC | 1 cut(s) | 3164 |
| NmeAIII | GCCGAG | 3 cut(s) | 2155, 2461, 3334 |
| NmuCI | GTSAC | 4 cut(s) | 736, 938, 1745, 3015 |
| NsbI | TGCGCA | 1 cut(s) | 631 |
| NsiI | ATGCAT | 1 cut(s) | 2416 |
| NspI | RCATGY | 1 cut(s) | 1645 |
| NspV | TTCGAA | 2 cut(s) | 835, 2350 |
| OliI | CACNNNNGTG | 1 cut(s) | 1605 |
| PagI | TCATGA | 2 cut(s) | 2827, 3024 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 427 |
| PctI | GAATGC | 2 cut(s) | 318, 2414 |
| PdiI | GCCGGC | 1 cut(s) | 3166 |
| PfeI | GAWTC | 8 cut(s) | 853, 1634, 1832, 1992, 2283, 2474, 3176, 3275 |
| Pfl23II | CGTACG | 1 cut(s) | 2012 |
| PflFI | GACNNNGTC | 1 cut(s) | 2669 |
| PinAI | ACCGGT | 3 cut(s) | 152, 1325, 1753 |
| Ple19I | CGATCG | 1 cut(s) | 1860 |
| PleI | GAGTC | 9 cut(s) | 122, 233, 935, 1969, 1974, 2446, 2597, 3036, 3495 |
| PluTI | GGCGCC | 1 cut(s) | 1952 |
| PpsI | GAGTC | 9 cut(s) | 122, 233, 935, 1969, 1974, 2446, 2597, 3036, 3495 |
| Ppu21I | YACGTR | 1 cut(s) | 422 |
| PpuMI | RGGWCCY | 1 cut(s) | 820 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1566 |
| PshBI | ATTAAT | 2 cut(s) | 2064, 2139 |
| Psp124BI | GAGCTC | 1 cut(s) | 2564 |
| Psp5II | RGGWCCY | 1 cut(s) | 820 |
| Psp6I | CCWGG | 2 cut(s) | 22, 2461 |
| PspEI | GGTNACC | 1 cut(s) | 263 |
| PspFI | CCCAGC | 1 cut(s) | 1686 |
| PspGI | CCWGG | 2 cut(s) | 22, 2461 |
| PspLI | CGTACG | 1 cut(s) | 2012 |
| PspOMI | GGGCCC | 1 cut(s) | 445 |
| PspPPI | RGGWCCY | 1 cut(s) | 820 |
| PstI | CTGCAG | 1 cut(s) | 1581 |
| PsuI | RGATCY | 2 cut(s) | 581, 2743 |
| PsyI | GACNNNGTC | 1 cut(s) | 2669 |
| PvuI | CGATCG | 1 cut(s) | 1860 |
| PvuII | CAGCTG | 3 cut(s) | 1690, 2398, 3527 |
| RseI | CAYNNNNRTG | 6 cut(s) | 708, 1605, 2879, 2913, 3303, 3401 |
| SacI | GAGCTC | 1 cut(s) | 2564 |
| SaqAI | TTAA | 8 cut(s) | 609, 1110, 1359, 2064, 2139, 2226, 2739, 2837 |
| ScaI | AGTACT | 1 cut(s) | 94 |
| SchI | GAGTC | 9 cut(s) | 123, 233, 935, 1969, 1974, 2446, 2597, 3037, 3496 |
| ScrFI | CCNGG | 5 cut(s) | 24, 146, 1937, 2237, 2463 |
| SduI | GDGCHC | 7 cut(s) | 449, 1063, 1720, 2564, 2876, 3043, 3133 |
| SfaNI | GCATC | 4 cut(s) | 960, 1801, 2704, 3142 |
| SfcI | CTRYAG | 2 cut(s) | 1577, 2320 |
| SfoI | GGCGCC | 1 cut(s) | 1950 |
| SfuI | TTCGAA | 2 cut(s) | 835, 2350 |
| SgrAI | CRCCGGYG | 1 cut(s) | 152 |
| SinI | GGWCC | 5 cut(s) | 496, 820, 2166, 2750, 2779 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 708, 1605, 2879, 2913, 3303, 3401 |
| SmlI | CTYRAG | 1 cut(s) | 2816 |
| SmoI | CTYRAG | 1 cut(s) | 2816 |
| SnaBI | TACGTA | 1 cut(s) | 422 |
| SspDI | GGCGCC | 1 cut(s) | 1948 |
| SspI | AATATT | 1 cut(s) | 752 |
| SspMI | CTAG | 6 cut(s) | 1223, 1251, 1479, 1631, 2376, 3092 |
| SstI | GAGCTC | 1 cut(s) | 2564 |
| StyD4I | CCNGG | 5 cut(s) | 22, 144, 1935, 2235, 2461 |
| TaaI | ACNGT | 4 cut(s) | 496, 872, 2356, 3380 |
| TaiI | ACGT | 5 cut(s) | 424, 1159, 2445, 3067, 3130 |
| TaqII | GACCGA | 1 cut(s) | 2849 |
| TatI | WGTACW | 1 cut(s) | 92 |
| TauI | GCSGC | 7 cut(s) | 1705, 1743, 1774, 1954, 3186, 3562, 3601 |
| TfiI | GAWTC | 8 cut(s) | 853, 1634, 1832, 1992, 2283, 2474, 3176, 3275 |
| Tru1I | TTAA | 8 cut(s) | 609, 1110, 1359, 2064, 2139, 2226, 2739, 2837 |
| Tru9I | TTAA | 8 cut(s) | 609, 1110, 1359, 2064, 2139, 2226, 2739, 2837 |
| TscAI | CASTG | 8 cut(s) | 745, 1491, 1714, 2692, 2874, 3274, 3310, 3397 |
| TseFI | GTSAC | 4 cut(s) | 736, 938, 1745, 3015 |
| Tsp45I | GTSAC | 4 cut(s) | 736, 938, 1745, 3015 |
| TspDTI | ATGAA | 8 cut(s) | 692, 786, 1173, 1665, 2605, 3013, 3354, 3488 |
| TspGWI | ACGGA | 5 cut(s) | 312, 2030, 2381, 3348, 3502 |
| TspRI | CASTG | 8 cut(s) | 745, 1491, 1714, 2692, 2874, 3274, 3310, 3397 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2669 |
| VpaK11BI | GGWCC | 5 cut(s) | 496, 820, 2166, 2750, 2779 |
| VspI | ATTAAT | 2 cut(s) | 2064, 2139 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1221 |
| XapI | RAATTY | 2 cut(s) | 1384, 2007 |
| XbaI | TCTAGA | 1 cut(s) | 1630 |
| XceI | RCATGY | 1 cut(s) | 1645 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 20 |
| XmaJI | CCTAGG | 1 cut(s) | 1222 |
| XspI | CTAG | 6 cut(s) | 1223, 1251, 1479, 1631, 2376, 3092 |
| ZrmI | AGTACT | 1 cut(s) | 94 |
| Zsp2I | ATGCAT | 1 cut(s) | 2416 |