RchiOBHm_Chr7g0240381
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
66312584 .. 66314236
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21545

Sequence Viewer

Length: 933 bp
ATGGATGATAGAACCTTTGTGTCTGGAAATGGAGATGAGGAACCACAGTTTCCCCCATTGGCTAGGCAGGGTTCTAATTACAATCTAACTTTGGATTGTAATGAGGTTCAAAGCAATTTGGGCAATATAAGCAAGCCTTTGAATACAAATATGGCACATTTGGATGAGTTACTTAAAAATGTGATATCAGTTGATCAAGAAGGGCAGCTGCTGCAAAACCCTTCTTCTTCTCCTTCTTCCTCACTGCCCACTTCACTTTTTCTTGGGAATTTCAATTTGAATGGACCATTAATGAGCAGTAAGAAGAAAACTATGGATCAGGTATGGAAGGAAATTGTTCATCATGATCATCATCCTCTCAATCTCAATTCCGCTGCAGCCGATGAATCTTTGCATCATCAAAGAATGACAACTATTGGAGAATCAACATCAGCAACAACACCACCTGACCATCTCCTAGTTCGAGCAGGTATCCTAAATGCTCATCCAACGATGCCCATTGATCCAACAGCTGCGGTATCGCAGCAAGCAGATTGGTTTCAGTTCCAAGTTGCTGCTGCTACTCAGCAGCAAATGACAATGTTGGACTCGAATTTCAAGGTTTGTGAGTCAGTATTTGAGAACTCTTCATCAGCTATGAATCTTGACACTTACTCTGAGAATCATCAAGTGGGTATGTCATTTCCAATGCCAGCAATATCAGCAGCATCATCTTCAGAGTCTCAGGCAACTCATGCCCAGAGGAAGCGCAATTACTCGGATGAAATGAAGGAGAAAAGTATTGAGAGGAGGCAGAAGAGGATGATAAAAAACAGAGAGTCAGCAGCAAGGTCAAGGGCAAGAAAGCAGGAAGTGGAGATACTCTTATCTTCAAATCCTACTAAATCCATGCCTAAACACCAACTTAGGCGCATCAGTTCAGCTTCCTTTTAG

Protein Analysis

310

Amino Acids

34.46

Weight (kDa)

6.46

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 458
AciI CCGC 2 cut(s) 372, 515
AclWI GGATC 2 cut(s) 324, 497
AcsI RAATTY 2 cut(s) 268, 592
AcuI CTGAAG 1 cut(s) 699
AgsI TTSAA 6 cut(s) 110, 142, 274, 280, 598, 873
AluBI AGCT 4 cut(s) 208, 512, 635, 923
AluI AGCT 4 cut(s) 208, 512, 635, 923
Alw26I GTCTC 1 cut(s) 726
AlwI GGATC 2 cut(s) 324, 497
AlwNI CAGNNNCTG 1 cut(s) 211
ApoI RAATTY 2 cut(s) 268, 592
AseI ATTAAT 1 cut(s) 290
Asp700I GAANNNNTTC 1 cut(s) 336
AspLEI GCGC 2 cut(s) 750, 912
AspS9I GGNCC 1 cut(s) 284
AvaII GGWCC 1 cut(s) 284
BarI GAAGNNNNNNTAC 4 cut(s) 737, 769, 843, 875
BccI CCATC 1 cut(s) 459
BciVI GTATCC 1 cut(s) 482
BclI TGATCA 2 cut(s) 193, 346
BcoDI GTCTC 1 cut(s) 726
BfaI CTAG 2 cut(s) 63, 458
BfmI CTRYAG 1 cut(s) 375
BfuAI ACCTGC 1 cut(s) 458
BfuI GTATCC 1 cut(s) 482
Bme18I GGWCC 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 284
BmiI GGNNCC 1 cut(s) 42
BmsI GCATC 4 cut(s) 403, 483, 716, 921
BsaBI GATNNNNATC 1 cut(s) 351
Bse8I GATNNNNATC 1 cut(s) 351
BseGI GGATG 6 cut(s) 10, 169, 352, 484, 766, 807
BseJI GATNNNNATC 1 cut(s) 351
BseMII CTCAG 3 cut(s) 578, 648, 737
BseRI GAGGAG 1 cut(s) 802
BsmAI GTCTC 1 cut(s) 726
Bsp143I GATC 4 cut(s) 193, 316, 346, 502
BspACI CCGC 2 cut(s) 372, 515
BspCNI CTCAG 3 cut(s) 577, 649, 736
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 42
BspMAI CTGCAG 1 cut(s) 379
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 2 cut(s) 324, 497
BssMI GATC 4 cut(s) 193, 316, 346, 502
Bst4CI ACNGT 1 cut(s) 48
Bst6I CTCTTC 2 cut(s) 631, 791
BstAPI GCANNNNNTGC 2 cut(s) 211, 734
BstC8I GCNNGC 3 cut(s) 134, 528, 693
BstDEI CTNAG 4 cut(s) 564, 657, 723, 905
BstF5I GGATG 6 cut(s) 10, 169, 352, 484, 766, 807
BstHHI GCGC 2 cut(s) 750, 912
BstKTI GATC 4 cut(s) 196, 319, 349, 505
BstMAI GTCTC 1 cut(s) 726
BstMBI GATC 4 cut(s) 193, 316, 346, 502
BstMWI GCNNNNNNNGC 5 cut(s) 120, 129, 211, 701, 734
BstSFI CTRYAG 1 cut(s) 375
BsuI GTATCC 1 cut(s) 482
BtsCI GGATG 6 cut(s) 10, 169, 352, 484, 766, 807
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 1 cut(s) 242
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 3 cut(s) 134, 528, 693
CaiI CAGNNNCTG 1 cut(s) 211
CciI TCATGA 1 cut(s) 343
CfoI GCGC 2 cut(s) 750, 912
Cfr13I GGNCC 1 cut(s) 284
CviAII CATG 3 cut(s) 344, 734, 889
CviJI RGCY 7 cut(s) 62, 136, 208, 380, 512, 635, 923
CviKI_1 RGCY 7 cut(s) 62, 136, 208, 380, 512, 635, 923
DdeI CTNAG 4 cut(s) 564, 657, 723, 905
DpnI GATC 4 cut(s) 195, 318, 348, 504
DpnII GATC 4 cut(s) 193, 316, 346, 502
Eam1104I CTCTTC 2 cut(s) 631, 791
EarI CTCTTC 2 cut(s) 631, 791
Eco32I GATATC 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 284
Eco57I CTGAAG 1 cut(s) 699
EcoRV GATATC 1 cut(s) 186
FaeI CATG 3 cut(s) 347, 737, 892
FaiI YATR 9 cut(s) 128, 152, 314, 325, 345, 638, 677, 735, 890
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FatI CATG 3 cut(s) 343, 733, 888
FbaI TGATCA 2 cut(s) 193, 346
FokI GGATG 6 cut(s) 17, 176, 339, 471, 773, 814
FspBI CTAG 2 cut(s) 63, 458
GlaI GCGC 2 cut(s) 749, 911
HhaI GCGC 2 cut(s) 750, 912
Hin1II CATG 3 cut(s) 347, 737, 892
Hin6I GCGC 2 cut(s) 748, 910
HinP1I GCGC 2 cut(s) 748, 910
HinfI GANTC 8 cut(s) 386, 422, 587, 608, 640, 661, 719, 818
Hpy188I TCNGA 3 cut(s) 658, 718, 760
Hpy188III TCNNGA 4 cut(s) 24, 197, 344, 644
HpyAV CCTTC 5 cut(s) 194, 231, 243, 322, 763
HpyCH4III ACNGT 1 cut(s) 48
HpyCH4V TGCA 3 cut(s) 214, 377, 394
HpyF10VI GCNNNNNNNGC 5 cut(s) 120, 129, 211, 701, 734
HpyF3I CTNAG 4 cut(s) 564, 657, 723, 905
Hsp92II CATG 3 cut(s) 347, 737, 892
HspAI GCGC 2 cut(s) 748, 910
Ksp22I TGATCA 2 cut(s) 193, 346
Kzo9I GATC 4 cut(s) 193, 316, 346, 502
LpnPI CCDG 9 cut(s) 9, 53, 305, 453, 459, 705, 710, 752, 833
LweI GCATC 4 cut(s) 403, 483, 716, 921
MaeI CTAG 2 cut(s) 63, 458
MaeIII GTNAC 1 cut(s) 168
MalI GATC 4 cut(s) 195, 318, 348, 504
MboI GATC 4 cut(s) 193, 316, 346, 502
MboII GAAGA 8 cut(s) 216, 219, 228, 316, 618, 705, 808, 861
MluCI AATT 8 cut(s) 76, 115, 268, 274, 333, 367, 592, 751
MlyI GAGTC 4 cut(s) 581, 617, 728, 827
MmeI TCCRAC 3 cut(s) 512, 530, 564
MnlI CCTC 8 cut(s) 31, 97, 250, 366, 735, 780, 783, 792
MroXI GAANNNNTTC 1 cut(s) 336
MseI TTAA 2 cut(s) 174, 290
MslI CAYNNNNRTG 1 cut(s) 162
MspA1I CMGCKG 3 cut(s) 208, 374, 512
MwoI GCNNNNNNNGC 5 cut(s) 120, 129, 211, 701, 734
NdeII GATC 4 cut(s) 193, 316, 346, 502
NlaIII CATG 3 cut(s) 347, 737, 892
NlaIV GGNNCC 1 cut(s) 42
PagI TCATGA 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 336
PfeI GAWTC 4 cut(s) 386, 422, 640, 661
PleI GAGTC 4 cut(s) 581, 616, 727, 826
PpsI GAGTC 4 cut(s) 581, 616, 727, 826
PshBI ATTAAT 1 cut(s) 290
PspN4I GGNNCC 1 cut(s) 42
PspPI GGNCC 1 cut(s) 284
PstI CTGCAG 1 cut(s) 379
PstNI CAGNNNCTG 1 cut(s) 211
PvuII CAGCTG 2 cut(s) 208, 512
RseI CAYNNNNRTG 1 cut(s) 162
SaqAI TTAA 2 cut(s) 174, 290
Sau3AI GATC 4 cut(s) 193, 316, 346, 502
Sau96I GGNCC 1 cut(s) 284
SchI GAGTC 4 cut(s) 581, 617, 728, 827
SfaNI GCATC 4 cut(s) 403, 483, 716, 921
SfcI CTRYAG 1 cut(s) 375
SinI GGWCC 1 cut(s) 284
SmiMI CAYNNNNRTG 1 cut(s) 162
Sse9I AATT 8 cut(s) 76, 115, 268, 274, 333, 367, 592, 751
SsiI CCGC 2 cut(s) 372, 515
SspMI CTAG 2 cut(s) 63, 458
TaaI ACNGT 1 cut(s) 48
TaqI TCGA 2 cut(s) 463, 590
TasI AATT 8 cut(s) 76, 115, 268, 274, 333, 367, 592, 751
TfiI GAWTC 4 cut(s) 386, 422, 640, 661
Tru1I TTAA 2 cut(s) 174, 290
Tru9I TTAA 2 cut(s) 174, 290
TscAI CASTG 1 cut(s) 249
TspDTI ATGAA 6 cut(s) 329, 399, 618, 653, 777, 782
TspRI CASTG 1 cut(s) 249
VpaK11BI GGWCC 1 cut(s) 284
VspI ATTAAT 1 cut(s) 290
XapI RAATTY 2 cut(s) 268, 592
XmnI GAANNNNTTC 1 cut(s) 336
XspI CTAG 2 cut(s) 63, 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.