Phosphopantothenoylcysteine decarboxylase subunit VHS3-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g38350 FvH4_5g38350 FvH4_5g38360 |
| malus_domestica | MD08G1174300.v1.1 MD08G1174400.v1.1 MD15G1361000.v1.1 |
| prunus_persica | Prupe.1G508200_v2.0.a1 Prupe.1G508400_v2.0.a1 Prupe.1G508400_v2.0.a1 Prupe.1G508400_v2.0.a1 |
| pyrus_communis | pycom08g14950 pycom15g32250 |
| rosa_chinensis | RchiOBHm_Chr7g0240371 RchiOBHm_Chr7g0240381 |
| rosa_laevigata | RLG00000000681 RLG00000000682 |
| rosa_multiflora | Rmu_sc0002676.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00220160 Rroxscaffold_3G00220180 |
| rosa_rugosa | Rorug07G0335100 Rorug07G0335200 Rorug07G0335300 Rorug07G0335400 |
| rosa_samantha | Rh7AG489500 Rh7AG489600 Rh7BG462500 Rh7BG462600 Rh7CG505800 Rh7CG505900 Rh7DG473500 Rh7DG473600 |
| rosa_wichuraiana | Rw7G040960 Rw7G040970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 112, 125 |
| AcsI | RAATTY | 1 cut(s) | 123 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 20, 75 |
| AgsI | TTSAA | 2 cut(s) | 34, 172 |
| AlwI | GGATC | 2 cut(s) | 112, 125 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 10 |
| ApoI | RAATTY | 1 cut(s) | 123 |
| BamHI | GGATCC | 1 cut(s) | 117 |
| BmiI | GGNNCC | 1 cut(s) | 119 |
| BmrI | ACTGGG | 1 cut(s) | 28 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BmuI | ACTGGG | 1 cut(s) | 28 |
| Bsa29I | ATCGAT | 1 cut(s) | 45 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 20, 75 |
| Bse1I | ACTGG | 1 cut(s) | 23 |
| BseCI | ATCGAT | 1 cut(s) | 45 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 20, 75 |
| BseNI | ACTGG | 1 cut(s) | 23 |
| Bsh1285I | CGRYCG | 1 cut(s) | 49 |
| BshVI | ATCGAT | 1 cut(s) | 45 |
| BsiEI | CGRYCG | 1 cut(s) | 49 |
| BsiSI | CCGG | 1 cut(s) | 69 |
| BslFI | GGGAC | 1 cut(s) | 127 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 20, 75 |
| BsmFI | GGGAC | 1 cut(s) | 127 |
| Bsp143I | GATC | 2 cut(s) | 46, 117 |
| BspDI | ATCGAT | 1 cut(s) | 45 |
| BspLI | GGNNCC | 1 cut(s) | 119 |
| BspPI | GGATC | 2 cut(s) | 112, 125 |
| BsrI | ACTGG | 1 cut(s) | 23 |
| BssMI | GATC | 2 cut(s) | 46, 117 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstKTI | GATC | 2 cut(s) | 49, 120 |
| BstMBI | GATC | 2 cut(s) | 46, 117 |
| BstMCI | CGRYCG | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstX2I | RGATCY | 1 cut(s) | 117 |
| BstYI | RGATCY | 1 cut(s) | 117 |
| Bsu15I | ATCGAT | 1 cut(s) | 45 |
| BsuTUI | ATCGAT | 1 cut(s) | 45 |
| CaiI | CAGNNNCTG | 1 cut(s) | 10 |
| ClaI | ATCGAT | 1 cut(s) | 45 |
| CviAII | CATG | 2 cut(s) | 101, 139 |
| CviJI | RGCY | 1 cut(s) | 56 |
| CviKI_1 | RGCY | 1 cut(s) | 56 |
| DpnI | GATC | 2 cut(s) | 48, 119 |
| DpnII | GATC | 2 cut(s) | 46, 117 |
| EcoRI | GAATTC | 1 cut(s) | 123 |
| FaeI | CATG | 2 cut(s) | 104, 142 |
| FaiI | YATR | 5 cut(s) | 26, 102, 140, 176, 178 |
| FaqI | GGGAC | 1 cut(s) | 127 |
| FatI | CATG | 2 cut(s) | 100, 138 |
| HapII | CCGG | 1 cut(s) | 69 |
| Hin1II | CATG | 2 cut(s) | 104, 142 |
| HinfI | GANTC | 2 cut(s) | 7, 96 |
| HpaII | CCGG | 1 cut(s) | 69 |
| Hpy188I | TCNGA | 1 cut(s) | 122 |
| HpyAV | CCTTC | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 104 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| Hsp92II | CATG | 2 cut(s) | 104, 142 |
| Kzo9I | GATC | 2 cut(s) | 46, 117 |
| LpnPI | CCDG | 5 cut(s) | 4, 45, 61, 82, 106 |
| LweI | GCATC | 1 cut(s) | 81 |
| MalI | GATC | 2 cut(s) | 48, 119 |
| MboI | GATC | 2 cut(s) | 46, 117 |
| MfeI | CAATTG | 1 cut(s) | 105 |
| MflI | RGATCY | 1 cut(s) | 117 |
| MluCI | AATT | 2 cut(s) | 105, 123 |
| MmeI | TCCRAC | 1 cut(s) | 95 |
| MspI | CCGG | 1 cut(s) | 69 |
| MunI | CAATTG | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 2 cut(s) | 46, 117 |
| NlaIII | CATG | 2 cut(s) | 104, 142 |
| NlaIV | GGNNCC | 1 cut(s) | 119 |
| PfeI | GAWTC | 2 cut(s) | 7, 96 |
| Ple19I | CGATCG | 1 cut(s) | 49 |
| PspN4I | GGNNCC | 1 cut(s) | 119 |
| PstNI | CAGNNNCTG | 1 cut(s) | 10 |
| PsuI | RGATCY | 1 cut(s) | 117 |
| PvuI | CGATCG | 1 cut(s) | 49 |
| Sau3AI | GATC | 2 cut(s) | 46, 117 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SgeI | CNNG | 8 cut(s) | 31, 46, 72, 81, 88, 105, 113, 151 |
| Sse9I | AATT | 2 cut(s) | 105, 123 |
| TaqI | TCGA | 1 cut(s) | 45 |
| TasI | AATT | 2 cut(s) | 105, 123 |
| TfiI | GAWTC | 2 cut(s) | 7, 96 |
| TspDTI | ATGAA | 1 cut(s) | 127 |
| XapI | RAATTY | 1 cut(s) | 123 |