No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g38350 FvH4_5g38350 FvH4_5g38360 |
| malus_domestica | MD08G1174300.v1.1 MD08G1174400.v1.1 MD15G1361000.v1.1 |
| prunus_persica | Prupe.1G508200_v2.0.a1 Prupe.1G508400_v2.0.a1 Prupe.1G508400_v2.0.a1 Prupe.1G508400_v2.0.a1 |
| pyrus_communis | pycom08g14950 pycom15g32250 |
| rosa_chinensis | RchiOBHm_Chr7g0240371 RchiOBHm_Chr7g0240381 |
| rosa_laevigata | RLG00000000681 RLG00000000682 |
| rosa_multiflora | Rmu_sc0002676.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00220160 Rroxscaffold_3G00220180 |
| rosa_rugosa | Rorug07G0335100 Rorug07G0335200 Rorug07G0335300 Rorug07G0335400 |
| rosa_samantha | Rh7AG489500 Rh7AG489600 Rh7BG462500 Rh7BG462600 Rh7CG505800 Rh7CG505900 Rh7DG473500 Rh7DG473600 |
| rosa_wichuraiana | Rw7G040960 Rw7G040970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 146, 159 |
| AcuI | CTGAAG | 3 cut(s) | 76, 88, 312 |
| AfaI | GTAC | 2 cut(s) | 65, 129 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 277, 351 |
| AluBI | AGCT | 6 cut(s) | 59, 96, 146, 163, 308, 350 |
| AluI | AGCT | 6 cut(s) | 59, 96, 146, 163, 308, 350 |
| Alw26I | GTCTC | 1 cut(s) | 88 |
| AlwI | GGATC | 2 cut(s) | 146, 159 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 18 |
| AspS9I | GGNCC | 2 cut(s) | 176, 268 |
| AsuHPI | GGTGA | 1 cut(s) | 245 |
| AvaII | GGWCC | 2 cut(s) | 176, 268 |
| BamHI | GGATCC | 1 cut(s) | 151 |
| BccI | CCATC | 4 cut(s) | 224, 248, 292, 359 |
| BcoDI | GTCTC | 1 cut(s) | 88 |
| BglII | AGATCT | 1 cut(s) | 24 |
| Bme18I | GGWCC | 2 cut(s) | 176, 268 |
| BmgT120I | GGNCC | 2 cut(s) | 176, 268 |
| BmiI | GGNNCC | 5 cut(s) | 153, 193, 269, 270, 282 |
| BmsI | GCATC | 1 cut(s) | 385 |
| BpmI | CTGGAG | 1 cut(s) | 378 |
| Bpu10I | CCTNAGC | 1 cut(s) | 147 |
| BsaI | GGTCTC | 1 cut(s) | 88 |
| BsaJI | CCNNGG | 1 cut(s) | 187 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 277, 351 |
| BseDI | CCNNGG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 277, 351 |
| BseMII | CTCAG | 2 cut(s) | 74, 161 |
| BseRI | GAGGAG | 2 cut(s) | 204, 293 |
| BseYI | CCCAGC | 2 cut(s) | 308, 350 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 277, 351 |
| BsmAI | GTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| Bso31I | GGTCTC | 1 cut(s) | 88 |
| Bsp143I | GATC | 2 cut(s) | 24, 151 |
| BspCNI | CTCAG | 2 cut(s) | 73, 160 |
| BspLI | GGNNCC | 5 cut(s) | 153, 193, 269, 270, 282 |
| BspPI | GGATC | 2 cut(s) | 146, 159 |
| BspTNI | GGTCTC | 1 cut(s) | 88 |
| BssECI | CCNNGG | 1 cut(s) | 187 |
| BssMI | GATC | 2 cut(s) | 24, 151 |
| Bst4CI | ACNGT | 1 cut(s) | 341 |
| Bst6I | CTCTTC | 1 cut(s) | 270 |
| BstDEI | CTNAG | 3 cut(s) | 30, 60, 147 |
| BstKTI | GATC | 2 cut(s) | 27, 154 |
| BstMAI | GTCTC | 1 cut(s) | 88 |
| BstMBI | GATC | 2 cut(s) | 24, 151 |
| BstX2I | RGATCY | 2 cut(s) | 24, 151 |
| BstYI | RGATCY | 2 cut(s) | 24, 151 |
| BtgZI | GCGATG | 1 cut(s) | 378 |
| Cfr13I | GGNCC | 2 cut(s) | 176, 268 |
| Csp6I | GTAC | 2 cut(s) | 64, 128 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 238, 273 |
| CviQI | GTAC | 2 cut(s) | 64, 128 |
| DdeI | CTNAG | 3 cut(s) | 30, 60, 147 |
| DpnI | GATC | 2 cut(s) | 26, 153 |
| DpnII | GATC | 2 cut(s) | 24, 151 |
| Eam1104I | CTCTTC | 1 cut(s) | 270 |
| EarI | CTCTTC | 1 cut(s) | 270 |
| Eco31I | GGTCTC | 1 cut(s) | 88 |
| Eco47I | GGWCC | 2 cut(s) | 176, 268 |
| Eco57I | CTGAAG | 3 cut(s) | 76, 88, 312 |
| EcoO109I | RGGNCCY | 1 cut(s) | 268 |
| EcoT22I | ATGCAT | 1 cut(s) | 378 |
| FaiI | YATR | 1 cut(s) | 374 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| GsaI | CCCAGC | 2 cut(s) | 312, 354 |
| GsuI | CTGGAG | 1 cut(s) | 378 |
| HinfI | GANTC | 1 cut(s) | 68 |
| HphI | GGTGA | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 176 |
| Hpy188I | TCNGA | 4 cut(s) | 24, 220, 292, 381 |
| Hpy188III | TCNNGA | 1 cut(s) | 149 |
| Hpy8I | GTNNAC | 1 cut(s) | 176 |
| HpyAV | CCTTC | 3 cut(s) | 100, 296, 376 |
| HpyCH4III | ACNGT | 1 cut(s) | 341 |
| HpyCH4V | TGCA | 2 cut(s) | 376, 396 |
| HpyF3I | CTNAG | 3 cut(s) | 30, 60, 147 |
| KflI | GGGWCCC | 1 cut(s) | 268 |
| Kzo9I | GATC | 2 cut(s) | 24, 151 |
| LmnI | GCTCC | 3 cut(s) | 191, 280, 305 |
| LpnPI | CCDG | 7 cut(s) | 91, 97, 134, 173, 294, 336, 342 |
| LweI | GCATC | 1 cut(s) | 385 |
| MalI | GATC | 2 cut(s) | 26, 153 |
| MboI | GATC | 2 cut(s) | 24, 151 |
| MboII | GAAGA | 5 cut(s) | 251, 279, 287, 305, 311 |
| MflI | RGATCY | 2 cut(s) | 24, 151 |
| MluCI | AATT | 1 cut(s) | 316 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MnlI | CCTC | 3 cut(s) | 182, 271, 353 |
| Mph1103I | ATGCAT | 1 cut(s) | 378 |
| MroXI | GAANNNNTTC | 1 cut(s) | 18 |
| MseI | TTAA | 1 cut(s) | 98 |
| NdeII | GATC | 2 cut(s) | 24, 151 |
| NlaIV | GGNNCC | 5 cut(s) | 153, 193, 269, 270, 282 |
| NsiI | ATGCAT | 1 cut(s) | 378 |
| PdmI | GAANNNNTTC | 1 cut(s) | 18 |
| PleI | GAGTC | 1 cut(s) | 62 |
| PpsI | GAGTC | 1 cut(s) | 62 |
| PpuMI | RGGWCCY | 1 cut(s) | 268 |
| Psp5II | RGGWCCY | 1 cut(s) | 268 |
| PspFI | CCCAGC | 2 cut(s) | 308, 350 |
| PspN4I | GGNNCC | 5 cut(s) | 153, 193, 269, 270, 282 |
| PspPI | GGNCC | 2 cut(s) | 176, 268 |
| PspPPI | RGGWCCY | 1 cut(s) | 268 |
| PsuI | RGATCY | 2 cut(s) | 24, 151 |
| RsaI | GTAC | 2 cut(s) | 65, 129 |
| RsaNI | GTAC | 2 cut(s) | 64, 128 |
| SaqAI | TTAA | 1 cut(s) | 98 |
| Sau3AI | GATC | 2 cut(s) | 24, 151 |
| Sau96I | GGNCC | 2 cut(s) | 176, 268 |
| SchI | GAGTC | 1 cut(s) | 62 |
| SetI | ASST | 9 cut(s) | 61, 92, 98, 110, 148, 165, 310, 352, 387 |
| SfaNI | GCATC | 1 cut(s) | 385 |
| SinI | GGWCC | 2 cut(s) | 176, 268 |
| Sse9I | AATT | 1 cut(s) | 316 |
| SspI | AATATT | 2 cut(s) | 209, 403 |
| TaaI | ACNGT | 1 cut(s) | 341 |
| TaqII | GACCGA | 1 cut(s) | 70 |
| TasI | AATT | 1 cut(s) | 316 |
| Tru1I | TTAA | 1 cut(s) | 98 |
| Tru9I | TTAA | 1 cut(s) | 98 |
| TspDTI | ATGAA | 3 cut(s) | 219, 252, 312 |
| VpaK11BI | GGWCC | 2 cut(s) | 176, 268 |
| XmnI | GAANNNNTTC | 1 cut(s) | 18 |
| Zsp2I | ATGCAT | 1 cut(s) | 378 |