function. Its presence in a non-photosynthetic plant (Epifagus virginiana) and experiments in tobacco indicate that it has an essential function which is probably not related to photosynthesis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00820 |
| fragaria_vesca | FvH4_6g09000 |
| malus_domestica | MD15G1364200.v1.1 |
| prunus_persica | Prupe.4G266600_v2.0.a1 |
| pyrus_communis | pycom16g20490 pycom16g20550 |
| rosa_chinensis | RchiOBHm_Chr1g0329571 RchiOBHm_Chr2g0102151 RchiOBHm_Chr2g0118431 RchiOBHm_Chr2g0118441 RchiOBHm_Chr2g0118451 RchiOBHm_Chr2g0118501 RchiOBHm_Chr2g0118531 RchiOBHm_CPg0501801 RchiOBHm_CPg0501831 RchiOBHm_CPg0502611 |
| rosa_laevigata | RLG00000000006 RLG00000000213 RLG00000000240 RLG00000000256 RLG00000002780 |
| rosa_samantha | Rh1AG125000 Rh1BG209500 Rh1CG032300 Rh1DG236100 Rh1DG236200 Rh1DG236300 Rh2CG158500 Rh2DG300400 Rh2DG300500 Rh3BG145300 |
| rosa_wichuraiana | Rw3G020690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 309 |
| Acc36I | ACCTGC | 1 cut(s) | 1749 |
| AccB1I | GGYRCC | 1 cut(s) | 1797 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 404 |
| AccBSI | CCGCTC | 1 cut(s) | 908 |
| AciI | CCGC | 8 cut(s) | 141, 150, 177, 325, 906, 1882, 2015, 2045 |
| AcoI | YGGCCR | 1 cut(s) | 619 |
| AcsI | RAATTY | 2 cut(s) | 64, 2075 |
| AcyI | GRCGYC | 1 cut(s) | 1798 |
| AfaI | GTAC | 5 cut(s) | 1074, 1263, 1343, 1352, 1946 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 182, 183, 375, 404, 444, 445, 634, 1626 |
| AgsI | TTSAA | 6 cut(s) | 220, 716, 1712, 1768, 1913, 2038 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1438 |
| AjnI | CCWGG | 2 cut(s) | 552, 830 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 2112, 2144, 2358 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 812, 844 |
| AluBI | AGCT | 4 cut(s) | 640, 646, 917, 2290 |
| AluI | AGCT | 4 cut(s) | 640, 646, 917, 2290 |
| Alw26I | GTCTC | 3 cut(s) | 295, 744, 1446 |
| AoxI | GGCC | 6 cut(s) | 619, 1101, 1245, 1516, 1616, 1832 |
| ApoI | RAATTY | 2 cut(s) | 64, 2075 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 722, 754 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 68, 548, 1028 |
| AspLEI | GCGC | 3 cut(s) | 667, 1544, 1800 |
| AspS9I | GGNCC | 8 cut(s) | 173, 1050, 1102, 1245, 1451, 1617, 1833, 2008 |
| AsuC2I | CCSGG | 3 cut(s) | 1449, 1561, 2360 |
| AsuHPI | GGTGA | 1 cut(s) | 700 |
| AsuII | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| AvaII | GGWCC | 4 cut(s) | 173, 1050, 1451, 2008 |
| BamHI | GGATCC | 4 cut(s) | 901, 1221, 1553, 2017 |
| BanI | GGYRCC | 1 cut(s) | 1797 |
| BanII | GRGCYC | 1 cut(s) | 1786 |
| BauI | CACGAG | 1 cut(s) | 1953 |
| BccI | CCATC | 8 cut(s) | 16, 61, 278, 406, 1898, 2202, 2269, 2343 |
| BceAI | ACGGC | 2 cut(s) | 606, 1232 |
| BciT130I | CCWGG | 2 cut(s) | 554, 832 |
| BciVI | GTATCC | 1 cut(s) | 57 |
| BclI | TGATCA | 1 cut(s) | 1672 |
| BcnI | CCSGG | 3 cut(s) | 1449, 1561, 2360 |
| BcoDI | GTCTC | 3 cut(s) | 295, 744, 1446 |
| BfaI | CTAG | 8 cut(s) | 92, 122, 444, 503, 855, 1002, 1508, 1788 |
| BfmI | CTRYAG | 1 cut(s) | 468 |
| BfoI | RGCGCY | 2 cut(s) | 1545, 1801 |
| BfuAI | ACCTGC | 1 cut(s) | 1749 |
| BfuI | GTATCC | 1 cut(s) | 57 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1806, 2104 |
| BglII | AGATCT | 4 cut(s) | 1078, 1157, 1961, 2125 |
| BisI | GCNGC | 1 cut(s) | 151 |
| BlsI | GCNGC | 1 cut(s) | 152 |
| Bme1390I | CCNGG | 5 cut(s) | 554, 832, 1449, 1561, 2360 |
| Bme18I | GGWCC | 4 cut(s) | 173, 1050, 1451, 2008 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1438 |
| BmgT120I | GGNCC | 8 cut(s) | 173, 1050, 1102, 1245, 1451, 1617, 1833, 2008 |
| BmrFI | CCNGG | 5 cut(s) | 554, 832, 1449, 1561, 2360 |
| BmsI | GCATC | 3 cut(s) | 672, 1635, 2085 |
| BpmI | CTGGAG | 2 cut(s) | 662, 814 |
| Bpu14I | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| BpuEI | CTTGAG | 1 cut(s) | 1413 |
| BpuMI | CCSGG | 3 cut(s) | 1449, 1561, 2360 |
| Bsa29I | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BsaBI | GATNNNNATC | 3 cut(s) | 45, 1503, 1593 |
| BsaHI | GRCGYC | 1 cut(s) | 1798 |
| BsaI | GGTCTC | 1 cut(s) | 1446 |
| BsaJI | CCNNGG | 6 cut(s) | 567, 805, 831, 1059, 1625, 1802 |
| BsaWI | WCCGGW | 1 cut(s) | 1546 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 812, 842, 1716, 1746 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 182, 183, 375, 404, 444, 445, 634, 1626 |
| Bse1I | ACTGG | 1 cut(s) | 481 |
| Bse3DI | GCAATG | 2 cut(s) | 741, 1604 |
| Bse8I | GATNNNNATC | 3 cut(s) | 45, 1503, 1593 |
| BseBI | CCWGG | 2 cut(s) | 554, 832 |
| BseCI | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BseDI | CCNNGG | 6 cut(s) | 567, 805, 831, 1059, 1625, 1802 |
| BseGI | GGATG | 4 cut(s) | 784, 1909, 2261, 2368 |
| BseJI | GATNNNNATC | 3 cut(s) | 45, 1503, 1593 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 182, 183, 375, 404, 444, 445, 634, 1626 |
| BseMI | GCAATG | 2 cut(s) | 741, 1604 |
| BseNI | ACTGG | 1 cut(s) | 481 |
| BseRI | GAGGAG | 1 cut(s) | 1769 |
| BseX3I | CGGCCG | 1 cut(s) | 619 |
| Bsh1285I | CGRYCG | 2 cut(s) | 622, 1425 |
| BshFI | GGCC | 6 cut(s) | 621, 1103, 1247, 1518, 1618, 1834 |
| BshNI | GGYRCC | 1 cut(s) | 1797 |
| BshVI | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BsiEI | CGRYCG | 2 cut(s) | 622, 1425 |
| BsiSI | CCGG | 6 cut(s) | 686, 1416, 1449, 1547, 1561, 2360 |
| BslFI | GGGAC | 2 cut(s) | 159, 2021 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 182, 183, 375, 404, 444, 445, 634, 1626 |
| BsmAI | GTCTC | 3 cut(s) | 295, 744, 1446 |
| BsmFI | GGGAC | 2 cut(s) | 159, 2021 |
| BsmI | GAATGC | 1 cut(s) | 667 |
| BsnI | GGCC | 6 cut(s) | 621, 1103, 1247, 1518, 1618, 1834 |
| Bso31I | GGTCTC | 1 cut(s) | 1446 |
| Bsp119I | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1786 |
| Bsp1407I | TGTACA | 1 cut(s) | 1341 |
| Bsp19I | CCATGG | 1 cut(s) | 1059 |
| BspACI | CCGC | 8 cut(s) | 141, 150, 177, 325, 906, 1882, 2015, 2045 |
| BspANI | GGCC | 6 cut(s) | 621, 1103, 1247, 1518, 1618, 1834 |
| BspDI | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BspHI | TCATGA | 1 cut(s) | 769 |
| BspMI | ACCTGC | 1 cut(s) | 1749 |
| BspQI | GCTCTTC | 1 cut(s) | 1170 |
| BspT104I | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| BspT107I | GGYRCC | 1 cut(s) | 1797 |
| BspTNI | GGTCTC | 1 cut(s) | 1446 |
| BsrBI | CCGCTC | 1 cut(s) | 908 |
| BsrDI | GCAATG | 2 cut(s) | 741, 1604 |
| BsrGI | TGTACA | 1 cut(s) | 1341 |
| BsrI | ACTGG | 1 cut(s) | 481 |
| BssECI | CCNNGG | 6 cut(s) | 567, 805, 831, 1059, 1625, 1802 |
| BssNI | GRCGYC | 1 cut(s) | 1798 |
| BssSI | CACGAG | 1 cut(s) | 1953 |
| BssT1I | CCWWGG | 4 cut(s) | 567, 1059, 1625, 1802 |
| Bst2BI | CACGAG | 1 cut(s) | 1953 |
| Bst2UI | CCWGG | 2 cut(s) | 554, 832 |
| Bst4CI | ACNGT | 2 cut(s) | 535, 2225 |
| Bst6I | CTCTTC | 2 cut(s) | 1170, 2085 |
| BstACI | GRCGYC | 1 cut(s) | 1798 |
| BstAUI | TGTACA | 1 cut(s) | 1341 |
| BstBI | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| BstC8I | GCNNGC | 1 cut(s) | 1880 |
| BstDEI | CTNAG | 5 cut(s) | 204, 308, 1268, 1636, 2213 |
| BstDSI | CCRYGG | 1 cut(s) | 1059 |
| BstF5I | GGATG | 4 cut(s) | 784, 1909, 2261, 2368 |
| BstH2I | RGCGCY | 2 cut(s) | 1545, 1801 |
| BstHHI | GCGC | 3 cut(s) | 667, 1544, 1800 |
| BstMAI | GTCTC | 3 cut(s) | 295, 744, 1446 |
| BstMCI | CGRYCG | 2 cut(s) | 622, 1425 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 914, 1615, 1806, 2104, 2176 |
| BstNI | CCWGG | 2 cut(s) | 554, 832 |
| BstNSI | RCATGY | 2 cut(s) | 160, 939 |
| BstSCI | CCNGG | 5 cut(s) | 552, 830, 1447, 1559, 2358 |
| BstSFI | CTRYAG | 1 cut(s) | 468 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 898, 1060, 1843 |
| BstZI | CGGCCG | 1 cut(s) | 619 |
| Bsu15I | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BsuI | GTATCC | 1 cut(s) | 57 |
| BsuRI | GGCC | 6 cut(s) | 621, 1103, 1247, 1518, 1618, 1834 |
| BsuTUI | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| BtgI | CCRYGG | 1 cut(s) | 1059 |
| BtgZI | GCGATG | 1 cut(s) | 2183 |
| BtsCI | GGATG | 4 cut(s) | 784, 1909, 2261, 2368 |
| BveI | ACCTGC | 1 cut(s) | 1749 |
| Cac8I | GCNNGC | 1 cut(s) | 1880 |
| CciI | TCATGA | 1 cut(s) | 769 |
| CfoI | GCGC | 3 cut(s) | 667, 1544, 1800 |
| Cfr13I | GGNCC | 8 cut(s) | 173, 1050, 1102, 1245, 1451, 1617, 1833, 2008 |
| ClaI | ATCGAT | 3 cut(s) | 234, 243, 1109 |
| Csp6I | GTAC | 5 cut(s) | 1073, 1262, 1342, 1351, 1945 |
| CviQI | GTAC | 5 cut(s) | 1073, 1262, 1342, 1351, 1945 |
| DdeI | CTNAG | 5 cut(s) | 204, 308, 1268, 1636, 2213 |
| DinI | GGCGCC | 1 cut(s) | 1799 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 309 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1438 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 309 |
| EaeI | YGGCCR | 1 cut(s) | 619 |
| EagI | CGGCCG | 1 cut(s) | 619 |
| Eam1104I | CTCTTC | 2 cut(s) | 1170, 2085 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1438 |
| EarI | CTCTTC | 2 cut(s) | 1170, 2085 |
| EciI | GGCGGA | 2 cut(s) | 340, 2034 |
| EclXI | CGGCCG | 1 cut(s) | 619 |
| Eco130I | CCWWGG | 4 cut(s) | 567, 1059, 1625, 1802 |
| Eco24I | GRGCYC | 1 cut(s) | 1786 |
| Eco31I | GGTCTC | 1 cut(s) | 1446 |
| Eco32I | GATATC | 2 cut(s) | 238, 616 |
| Eco47I | GGWCC | 4 cut(s) | 173, 1050, 1451, 2008 |
| Eco52I | CGGCCG | 1 cut(s) | 619 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1102, 2008 |
| EcoRI | GAATTC | 2 cut(s) | 64, 2075 |
| EcoRII | CCWGG | 2 cut(s) | 552, 830 |
| EcoRV | GATATC | 2 cut(s) | 238, 616 |
| EcoT14I | CCWWGG | 4 cut(s) | 567, 1059, 1625, 1802 |
| EcoT22I | ATGCAT | 1 cut(s) | 941 |
| EcoT38I | GRGCYC | 1 cut(s) | 1786 |
| EgeI | GGCGCC | 1 cut(s) | 1799 |
| EheI | GGCGCC | 1 cut(s) | 1799 |
| ErhI | CCWWGG | 4 cut(s) | 567, 1059, 1625, 1802 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 71, 103 |
| FaqI | GGGAC | 2 cut(s) | 159, 2021 |
| FauI | CCCGC | 2 cut(s) | 184, 913 |
| FbaI | TGATCA | 1 cut(s) | 1672 |
| Fnu4HI | GCNGC | 1 cut(s) | 151 |
| FokI | GGATG | 4 cut(s) | 791, 1916, 2248, 2375 |
| FriOI | GRGCYC | 1 cut(s) | 1786 |
| Fsp4HI | GCNGC | 1 cut(s) | 151 |
| FspBI | CTAG | 8 cut(s) | 92, 122, 444, 503, 855, 1002, 1508, 1788 |
| GlaI | GCGC | 3 cut(s) | 666, 1543, 1799 |
| GluI | GCNGC | 1 cut(s) | 151 |
| GsuI | CTGGAG | 2 cut(s) | 662, 814 |
| HaeII | RGCGCY | 2 cut(s) | 1545, 1801 |
| HaeIII | GGCC | 6 cut(s) | 621, 1103, 1247, 1518, 1618, 1834 |
| HapII | CCGG | 6 cut(s) | 686, 1416, 1449, 1547, 1561, 2360 |
| HhaI | GCGC | 3 cut(s) | 667, 1544, 1800 |
| Hin1I | GRCGYC | 1 cut(s) | 1798 |
| Hin6I | GCGC | 3 cut(s) | 665, 1542, 1798 |
| HinP1I | GCGC | 3 cut(s) | 665, 1542, 1798 |
| HpaII | CCGG | 6 cut(s) | 686, 1416, 1449, 1547, 1561, 2360 |
| HphI | GGTGA | 1 cut(s) | 700 |
| Hpy166II | GTNNAC | 1 cut(s) | 820 |
| Hpy8I | GTNNAC | 1 cut(s) | 820 |
| HpyAV | CCTTC | 8 cut(s) | 722, 945, 1236, 1319, 1532, 1709, 1715, 1721 |
| HpyCH4III | ACNGT | 2 cut(s) | 535, 2225 |
| HpyCH4IV | ACGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 8 cut(s) | 747, 939, 1253, 1578, 1648, 1744, 1936, 2084 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 914, 1615, 1806, 2104, 2176 |
| HpyF3I | CTNAG | 5 cut(s) | 204, 308, 1268, 1636, 2213 |
| HpySE526I | ACGT | 1 cut(s) | 199 |
| Hsp92I | GRCGYC | 1 cut(s) | 1798 |
| HspAI | GCGC | 3 cut(s) | 665, 1542, 1798 |
| KasI | GGCGCC | 1 cut(s) | 1797 |
| KflI | GGGWCCC | 1 cut(s) | 2008 |
| Ksp22I | TGATCA | 1 cut(s) | 1672 |
| LguI | GCTCTTC | 1 cut(s) | 1170 |
| LmnI | GCTCC | 7 cut(s) | 426, 637, 643, 922, 1283, 1549, 1789 |
| LweI | GCATC | 3 cut(s) | 672, 1635, 2085 |
| MaeI | CTAG | 8 cut(s) | 92, 122, 444, 503, 855, 1002, 1508, 1788 |
| MaeII | ACGT | 1 cut(s) | 199 |
| MaeIII | GTNAC | 5 cut(s) | 590, 608, 623, 1319, 1600 |
| MbiI | CCGCTC | 1 cut(s) | 908 |
| MhlI | GDGCHC | 1 cut(s) | 1786 |
| Mly113I | GGCGCC | 1 cut(s) | 1798 |
| MlyI | GAGTC | 5 cut(s) | 797, 874, 1479, 1740, 1948 |
| MnlI | CCTC | 9 cut(s) | 60, 379, 449, 815, 1093, 1567, 1745, 1747, 1750 |
| Mph1103I | ATGCAT | 1 cut(s) | 941 |
| MroXI | GAANNNNTTC | 3 cut(s) | 68, 548, 1028 |
| MseI | TTAA | 4 cut(s) | 77, 929, 942, 1382 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1058 |
| MspI | CCGG | 6 cut(s) | 686, 1416, 1449, 1547, 1561, 2360 |
| MspR9I | CCNGG | 5 cut(s) | 554, 832, 1449, 1561, 2360 |
| Mva1269I | GAATGC | 1 cut(s) | 667 |
| MvaI | CCWGG | 2 cut(s) | 554, 832 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 914, 1615, 1806, 2104, 2176 |
| NarI | GGCGCC | 1 cut(s) | 1798 |
| NciI | CCSGG | 3 cut(s) | 1449, 1561, 2360 |
| NcoI | CCATGG | 1 cut(s) | 1059 |
| NmuCI | GTSAC | 4 cut(s) | 590, 608, 623, 1600 |
| NsiI | ATGCAT | 1 cut(s) | 941 |
| NspI | RCATGY | 2 cut(s) | 160, 939 |
| NspV | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| PagI | TCATGA | 1 cut(s) | 769 |
| PciSI | GCTCTTC | 1 cut(s) | 1170 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 240, 296 |
| PctI | GAATGC | 1 cut(s) | 667 |
| PdmI | GAANNNNTTC | 3 cut(s) | 68, 548, 1028 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 404 |
| PfoI | TCCNGGA | 3 cut(s) | 552, 1559, 2358 |
| PkrI | GCNGC | 1 cut(s) | 152 |
| PleI | GAGTC | 5 cut(s) | 796, 874, 1479, 1739, 1947 |
| PluTI | GGCGCC | 1 cut(s) | 1801 |
| PpsI | GAGTC | 5 cut(s) | 796, 874, 1479, 1739, 1947 |
| PpuMI | RGGWCCY | 1 cut(s) | 2008 |
| Psp5II | RGGWCCY | 1 cut(s) | 2008 |
| Psp6I | CCWGG | 2 cut(s) | 552, 830 |
| PspGI | CCWGG | 2 cut(s) | 552, 830 |
| PspPI | GGNCC | 8 cut(s) | 173, 1050, 1102, 1245, 1451, 1617, 1833, 2008 |
| PspPPI | RGGWCCY | 1 cut(s) | 2008 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1191, 1223 |
| RsaI | GTAC | 5 cut(s) | 1074, 1263, 1343, 1352, 1946 |
| RsaNI | GTAC | 5 cut(s) | 1073, 1262, 1342, 1351, 1945 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1058 |
| SapI | GCTCTTC | 1 cut(s) | 1170 |
| SaqAI | TTAA | 4 cut(s) | 77, 929, 942, 1382 |
| SatI | GCNGC | 1 cut(s) | 151 |
| Sau96I | GGNCC | 8 cut(s) | 173, 1050, 1102, 1245, 1451, 1617, 1833, 2008 |
| SchI | GAGTC | 5 cut(s) | 797, 874, 1479, 1740, 1948 |
| ScrFI | CCNGG | 5 cut(s) | 554, 832, 1449, 1561, 2360 |
| SduI | GDGCHC | 1 cut(s) | 1786 |
| SfaNI | GCATC | 3 cut(s) | 672, 1635, 2085 |
| SfcI | CTRYAG | 1 cut(s) | 468 |
| SfoI | GGCGCC | 1 cut(s) | 1799 |
| SfuI | TTCGAA | 4 cut(s) | 720, 1356, 1987, 2184 |
| SinI | GGWCC | 4 cut(s) | 173, 1050, 1451, 2008 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1058 |
| SmlI | CTYRAG | 1 cut(s) | 1428 |
| SmoI | CTYRAG | 1 cut(s) | 1428 |
| SsiI | CCGC | 8 cut(s) | 141, 150, 177, 325, 906, 1882, 2015, 2045 |
| SspDI | GGCGCC | 1 cut(s) | 1797 |
| SspI | AATATT | 2 cut(s) | 215, 862 |
| SspMI | CTAG | 8 cut(s) | 92, 122, 444, 503, 855, 1002, 1508, 1788 |
| StyD4I | CCNGG | 5 cut(s) | 552, 830, 1447, 1559, 2358 |
| StyI | CCWWGG | 4 cut(s) | 567, 1059, 1625, 1802 |
| TaaI | ACNGT | 2 cut(s) | 535, 2225 |
| TaiI | ACGT | 1 cut(s) | 202 |
| TaqII | GACCGA | 2 cut(s) | 711, 1411 |
| TatI | WGTACW | 2 cut(s) | 1261, 1341 |
| TauI | GCSGC | 1 cut(s) | 153 |
| Tru1I | TTAA | 4 cut(s) | 77, 929, 942, 1382 |
| Tru9I | TTAA | 4 cut(s) | 77, 929, 942, 1382 |
| TseFI | GTSAC | 4 cut(s) | 590, 608, 623, 1600 |
| Tsp45I | GTSAC | 4 cut(s) | 590, 608, 623, 1600 |
| TspGWI | ACGGA | 4 cut(s) | 413, 650, 1762, 2237 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 404 |
| VpaK11BI | GGWCC | 4 cut(s) | 173, 1050, 1451, 2008 |
| XapI | RAATTY | 2 cut(s) | 64, 2075 |
| XbaI | TCTAGA | 1 cut(s) | 121 |
| XceI | RCATGY | 2 cut(s) | 160, 939 |
| XmnI | GAANNNNTTC | 3 cut(s) | 68, 548, 1028 |
| XspI | CTAG | 8 cut(s) | 92, 122, 444, 503, 855, 1002, 1508, 1788 |
| Zsp2I | ATGCAT | 1 cut(s) | 941 |