RLG00000002318

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
32149252 .. 32155357
6106 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002318

Sequence Viewer

Length: 1485 bp
ATGGCCATGACTTGGAAGCTCTTGAAGCAAGTCCGAGCACCGTACACCGTCACTGCCTCTACGAGCCTCCACCGAATTCTACCCCCTCGATTGCTGAACTTGCATAATGCCACTAGGCTTTTCTCAAATGGGCCTCCGCTGCCTCCTCCTTCTGGAGAGCCTCCTCTGATTCAACTGCTGCAAAACCCTCCCTCTCCGTCTCCGTCGTCGCTGAACCAGGCAGAGCTTGCTAAGTTTGCCACCATTTCCGGAACCTGGTGGGATTTGGAAGGACCATTCAAACCGTTGCATGCAATGAATCCTACAAGGCTTGCCTTCATTCGCTCAACGCTGTGCCGTCATTTCAGGAGGGACTCGTTATCTGCTAGGCCCTTTGAAGGGCTCAGATTTATTGATGTTGGCTGTGGAGGTGGGATTCTTTCTGAGCCTTTAGCTCGGATGGGAGCTATTGTAACAGGAGTTGATGCTGTTGAGAAAAACATCAAGATAGCTCGCCTTCATGCAGACTTGGATCCAGTGACCTCAAAAATTGAATATCAATGCACTACAGCTGAAAAGCTAGTCGAGGAGCAAAAGAGTTTTGATGCTGTGTTTGCTTTAGAGGTGATTGAGCACGTGGAAAATCCTGCTGATTTCTGTAAATCTCTGTCAGCCTTAACTGTTCCCAGTGGAGCTACCGTGATTTCAACAATTAACCGTTCTATGAGAGCTTATGCCACTGCTATAATTGCAGCCGAGTATCTGCTCCACTGGCTTCCTAAAGGTACACATCAATGGTCAAATTTTCTTACTCCTGAAGAACTAGTCCTGATCCTGGAGCGTGCTTCTATTTCAGTCAAAGAGATGGCTGGCTTTGCATACAACCCTTTGACAGAAAGATGGTCAATATCTGATGATGTTAGTGTAAATTTCATCGCTTATGAGCATGAGATGAATTGCTCAGCAGCTGCTTGGCATCTGGCGTCAAGTGGCATGGATGTTTACACTGCCCTTGCTGGAGCTGTTGGAGCTCTATATGGTCCACTTCATGGCGGAGCAAATGAGCCTGTGTTTAAGATGCCAACTGAAATCGAATCTGTTGAGGACATTCCAGAGTTCATTAAGGGTGTGAAGAGCAGGAAGCAAAAGATGTCAGGTTTTGGCCATCGCATGTACAAGAACTATGATCCTAGAGCAAAGGTAGCTGTTGCTTTGAAGAAAGCTCAGTATCTGACGAGTATTTTGTTAAGAGAAAGCAGTTGTGCAACTGCGTCATCTCTCCTCACTCCTTTTCTCACTGAATTAATTGCAGATTGGCTGCTCAGCGAGAGGAACGAAGTCTGGAGTTTGTCATCTTTCAGTTCCCCCTTTCTTGTTCGTATTTCAATAAAAAGTATTCATTTAACTAGAGCCTTATTTGAAGGCTGTGAAATTTATTATCTAGAGGTTTGTCATGTTGCTACTCTAGCCCTGAATGGCTACACGTTTGACAGTTGCATAAGTTGA

Protein Analysis

495

Amino Acids

54.56

Weight (kDa)

6.71

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_23 PF13489 116 - 275 3.7e-19 Methyltransferase domain
Methyltransf_31 PF13847 126 - 259 1.2e-12 Methyltransferase domain
CMAS PF02353 126 - 237 1e-05 Mycolic acid cyclopropane synthetase
PrmA PF06325 129 - 231 4.9e-06 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_11 PF08241 131 - 227 1e-18 Methyltransferase domain
Methyltransf_25 PF13649 131 - 224 3.5e-14 Methyltransferase domain
Methyltransf_12 PF08242 131 - 224 1.3e-10 Methyltransferase domain
Citrate_synt PF00285 305 - 396 7.8e-33 Citrate synthase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 12, 1028
AccIII TCCGGA 1 cut(s) 248
AciI CCGC 2 cut(s) 137, 1032
AclWI GGATC 4 cut(s) 506, 519, 805, 1160
AcoI YGGCCR 2 cut(s) 3, 1141
AcsI RAATTY 4 cut(s) 75, 781, 907, 1410
AcuI CTGAAG 1 cut(s) 816
AcvI CACGTG 1 cut(s) 616
AcyI GRCGYC 1 cut(s) 962
AfaI GTAC 3 cut(s) 44, 766, 1154
AfiI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
AflIII ACRYGT 1 cut(s) 1461
AgsI TTSAA 9 cut(s) 25, 173, 280, 377, 533, 687, 1195, 1365, 1400
AhlI ACTAGT 1 cut(s) 802
AjnI CCWGG 3 cut(s) 216, 254, 813
Alw21I GWGCWC 3 cut(s) 40, 615, 1012
Alw26I GTCTC 1 cut(s) 204
AlwI GGATC 4 cut(s) 506, 519, 805, 1160
AlwNI CAGNNNCTG 2 cut(s) 947, 1210
Aor13HI TCCGGA 1 cut(s) 248
AoxI GGCC 4 cut(s) 3, 131, 368, 1141
ApeKI GCWGC 6 cut(s) 139, 178, 731, 944, 947, 1297
ApoI RAATTY 4 cut(s) 75, 781, 907, 1410
ArsI GACNNNNNNTTYG 2 cut(s) 1204, 1236
AseI ATTAAT 1 cut(s) 1283
AspS9I GGNCC 4 cut(s) 131, 272, 369, 1019
AsuHPI GGTGA 1 cut(s) 616
AvaII GGWCC 2 cut(s) 272, 1019
BalI TGGCCA 2 cut(s) 5, 1143
BamHI GGATCC 1 cut(s) 511
BanII GRGCYC 2 cut(s) 384, 1012
BbrPI CACGTG 1 cut(s) 616
Bbv12I GWGCWC 3 cut(s) 40, 615, 1012
BbvI GCAGC 6 cut(s) 126, 165, 743, 934, 956, 1284
BccI CCATC 4 cut(s) 433, 838, 873, 1152
BceAI ACGGC 1 cut(s) 321
BciT130I CCWGG 3 cut(s) 218, 256, 815
BcoDI GTCTC 1 cut(s) 204
BcuI ACTAGT 1 cut(s) 802
BfaI CTAG 8 cut(s) 114, 366, 560, 803, 1170, 1386, 1421, 1445
BfmI CTRYAG 1 cut(s) 546
BisI GCNGC 6 cut(s) 140, 179, 732, 945, 948, 1298
BlpI GCTNAGC 2 cut(s) 940, 1301
BlsI GCNGC 6 cut(s) 141, 180, 733, 946, 949, 1299
Bme1390I CCNGG 3 cut(s) 218, 256, 815
Bme18I GGWCC 2 cut(s) 272, 1019
BmgT120I GGNCC 4 cut(s) 131, 272, 369, 1019
BmiI GGNNCC 2 cut(s) 253, 513
BmrFI CCNGG 3 cut(s) 218, 256, 815
BmrI ACTGGG 1 cut(s) 660
BmsI GCATC 4 cut(s) 454, 574, 964, 1047
BmuI ACTGGG 1 cut(s) 660
BpmI CTGGAG 4 cut(s) 174, 836, 1017, 1342
Bpu1102I GCTNAGC 2 cut(s) 940, 1301
BsaAI YACGTR 1 cut(s) 616
BsaHI GRCGYC 1 cut(s) 962
BsaWI WCCGGW 1 cut(s) 248
BsaXI ACNNNNNCTCC 4 cut(s) 435, 465, 663, 693
Bsc4I CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
Bse1I ACTGG 3 cut(s) 515, 666, 755
Bse3DI GCAATG 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 248
BseBI CCWGG 3 cut(s) 218, 256, 815
BseGI GGATG 2 cut(s) 444, 982
BseLI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
BseMI GCAATG 1 cut(s) 300
BseMII CTCAG 5 cut(s) 397, 414, 954, 1217, 1315
BseNI ACTGG 3 cut(s) 515, 666, 755
BseRI GAGGAG 4 cut(s) 135, 153, 581, 1250
BseXI GCAGC 6 cut(s) 126, 165, 743, 934, 956, 1284
BshFI GGCC 4 cut(s) 5, 133, 370, 1143
BsiHKAI GWGCWC 3 cut(s) 40, 615, 1012
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 1 cut(s) 365
BslI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
BsmAI GTCTC 1 cut(s) 204
BsmBI CGTCTC 1 cut(s) 204
BsmFI GGGAC 1 cut(s) 365
BsnI GGCC 4 cut(s) 5, 133, 370, 1143
Bsp1286I GDGCHC 4 cut(s) 40, 384, 615, 1012
Bsp13I TCCGGA 1 cut(s) 248
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 3 cut(s) 511, 810, 1165
Bsp1720I GCTNAGC 2 cut(s) 940, 1301
BspACI CCGC 2 cut(s) 137, 1032
BspANI GGCC 4 cut(s) 5, 133, 370, 1143
BspCNI CTCAG 5 cut(s) 396, 415, 953, 1216, 1314
BspEI TCCGGA 1 cut(s) 248
BspLI GGNNCC 2 cut(s) 253, 513
BspPI GGATC 4 cut(s) 506, 519, 805, 1160
BspQI GCTCTTC 1 cut(s) 1106
BsrDI GCAATG 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 3 cut(s) 515, 666, 755
BssMI GATC 3 cut(s) 511, 810, 1165
BssNI GRCGYC 1 cut(s) 962
Bst2UI CCWGG 3 cut(s) 218, 256, 815
Bst4CI ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1472
Bst6I CTCTTC 1 cut(s) 1106
BstACI GRCGYC 1 cut(s) 962
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 1152
BstBAI YACGTR 1 cut(s) 616
BstC8I GCNNGC 6 cut(s) 228, 291, 312, 493, 822, 850
BstDEI CTNAG 6 cut(s) 231, 383, 423, 940, 1203, 1301
BstF5I GGATG 2 cut(s) 444, 982
BstKTI GATC 3 cut(s) 514, 813, 1168
BstMAI GTCTC 1 cut(s) 204
BstMBI GATC 3 cut(s) 511, 810, 1165
BstNI CCWGG 3 cut(s) 218, 256, 815
BstNSI RCATGY 2 cut(s) 293, 1153
BstSCI CCNGG 3 cut(s) 216, 254, 813
BstSFI CTRYAG 1 cut(s) 546
BstV1I GCAGC 6 cut(s) 126, 165, 743, 934, 956, 1284
BstX2I RGATCY 1 cut(s) 511
BstYI RGATCY 1 cut(s) 511
BsuRI GGCC 4 cut(s) 5, 133, 370, 1143
BtgZI GCGATG 2 cut(s) 898, 1130
BtsCI GGATG 2 cut(s) 444, 982
BtsI GCAGTG 3 cut(s) 51, 717, 984
BtsIMutI CAGTG 7 cut(s) 51, 522, 673, 717, 748, 984, 1275
Cac8I GCNNGC 6 cut(s) 228, 291, 312, 493, 822, 850
CaiI CAGNNNCTG 2 cut(s) 947, 1210
Cfr13I GGNCC 4 cut(s) 131, 272, 369, 1019
CseI GACGC 2 cut(s) 951, 1239
CsiI ACCWGGT 1 cut(s) 254
Csp6I GTAC 3 cut(s) 43, 765, 1153
CviAII CATG 8 cut(s) 7, 290, 500, 926, 973, 1028, 1150, 1433
CviQI GTAC 3 cut(s) 43, 765, 1153
DdeI CTNAG 6 cut(s) 231, 383, 423, 940, 1203, 1301
DpnI GATC 3 cut(s) 513, 812, 1167
DpnII GATC 3 cut(s) 511, 810, 1165
EaeI YGGCCR 2 cut(s) 3, 1141
Eam1104I CTCTTC 1 cut(s) 1106
EarI CTCTTC 1 cut(s) 1106
EciI GGCGGA 1 cut(s) 1047
Ecl136II GAGCTC 1 cut(s) 1010
Eco24I GRGCYC 2 cut(s) 384, 1012
Eco47I GGWCC 2 cut(s) 272, 1019
Eco53kI GAGCTC 1 cut(s) 1010
Eco57I CTGAAG 1 cut(s) 816
Eco72I CACGTG 1 cut(s) 616
EcoICRI GAGCTC 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 369
EcoRI GAATTC 1 cut(s) 75
EcoRII CCWGG 3 cut(s) 216, 254, 813
EcoT38I GRGCYC 2 cut(s) 384, 1012
Esp3I CGTCTC 1 cut(s) 204
FaeI CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1436
FaqI GGGAC 1 cut(s) 365
FatI CATG 8 cut(s) 6, 289, 499, 925, 972, 1027, 1149, 1432
Fnu4HI GCNGC 6 cut(s) 140, 179, 732, 945, 948, 1298
FokI GGATG 2 cut(s) 451, 989
FriOI GRGCYC 2 cut(s) 384, 1012
Fsp4HI GCNGC 6 cut(s) 140, 179, 732, 945, 948, 1298
FspBI CTAG 8 cut(s) 114, 366, 560, 803, 1170, 1386, 1421, 1445
GluI GCNGC 6 cut(s) 140, 179, 732, 945, 948, 1298
GsuI CTGGAG 4 cut(s) 174, 836, 1017, 1342
HaeIII GGCC 4 cut(s) 5, 133, 370, 1143
HapII CCGG 1 cut(s) 249
HgaI GACGC 2 cut(s) 951, 1239
Hin1I GRCGYC 1 cut(s) 962
Hin1II CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1436
HinfI GANTC 5 cut(s) 169, 298, 353, 415, 1073
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 616
Hpy166II GTNNAC 4 cut(s) 45, 767, 982, 1022
Hpy188I TCNGA 7 cut(s) 35, 168, 386, 424, 438, 892, 1212
Hpy8I GTNNAC 4 cut(s) 45, 767, 982, 1022
Hpy99I CGWCG 2 cut(s) 208, 211
HpyAV CCTTC 6 cut(s) 159, 263, 325, 371, 506, 1394
HpyCH4III ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1472
HpyCH4IV ACGT 2 cut(s) 615, 1463
HpyF3I CTNAG 6 cut(s) 231, 383, 423, 940, 1203, 1301
HpySE526I ACGT 2 cut(s) 615, 1463
Hsp92I GRCGYC 1 cut(s) 962
Hsp92II CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1436
Kpn2I TCCGGA 1 cut(s) 248
Kzo9I GATC 3 cut(s) 511, 810, 1165
LguI GCTCTTC 1 cut(s) 1106
LmnI GCTCC 8 cut(s) 443, 568, 671, 750, 817, 998, 1007, 1034
Lsp1109I GCAGC 6 cut(s) 126, 165, 743, 934, 956, 1284
LweI GCATC 4 cut(s) 454, 574, 964, 1047
MabI ACCWGGT 1 cut(s) 254
MaeI CTAG 8 cut(s) 114, 366, 560, 803, 1170, 1386, 1421, 1445
MaeII ACGT 2 cut(s) 615, 1463
MaeIII GTNAC 3 cut(s) 49, 451, 517
MalI GATC 3 cut(s) 513, 812, 1167
MboI GATC 3 cut(s) 511, 810, 1165
MboII GAAGA 3 cut(s) 809, 1123, 1207
MflI RGATCY 1 cut(s) 511
MhlI GDGCHC 4 cut(s) 40, 384, 615, 1012
MlsI TGGCCA 2 cut(s) 5, 1143
MluNI TGGCCA 2 cut(s) 5, 1143
MlyI GAGTC 1 cut(s) 347
MmeI TCCRAC 1 cut(s) 985
Mox20I TGGCCA 2 cut(s) 5, 1143
MroI TCCGGA 1 cut(s) 248
MscI TGGCCA 2 cut(s) 5, 1143
MseI TTAA 7 cut(s) 656, 693, 1053, 1101, 1226, 1283, 1382
MslI CAYNNNNRTG 1 cut(s) 772
Msp20I TGGCCA 2 cut(s) 5, 1143
MspA1I CMGCKG 3 cut(s) 139, 551, 947
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 3 cut(s) 218, 256, 815
MvaI CCWGG 3 cut(s) 218, 256, 815
NdeII GATC 3 cut(s) 511, 810, 1165
NlaIII CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1436
NlaIV GGNNCC 2 cut(s) 253, 513
NmeAIII GCCGAG 1 cut(s) 760
NmuCI GTSAC 2 cut(s) 49, 517
NspI RCATGY 2 cut(s) 293, 1153
PaeI GCATGC 1 cut(s) 293
PciSI GCTCTTC 1 cut(s) 1106
PfeI GAWTC 4 cut(s) 169, 298, 415, 1073
PflMI CCANNNNNTGG 2 cut(s) 12, 1028
PfoI TCCNGGA 1 cut(s) 813
PkrI GCNGC 6 cut(s) 141, 180, 733, 946, 949, 1299
PleI GAGTC 1 cut(s) 347
PmaCI CACGTG 1 cut(s) 616
PmlI CACGTG 1 cut(s) 616
PpsI GAGTC 1 cut(s) 347
Ppu21I YACGTR 1 cut(s) 616
PshBI ATTAAT 1 cut(s) 1283
Psp124BI GAGCTC 1 cut(s) 1012
Psp6I CCWGG 3 cut(s) 216, 254, 813
PspCI CACGTG 1 cut(s) 616
PspGI CCWGG 3 cut(s) 216, 254, 813
PspN4I GGNNCC 2 cut(s) 253, 513
PspPI GGNCC 4 cut(s) 131, 272, 369, 1019
PstNI CAGNNNCTG 2 cut(s) 947, 1210
PsuI RGATCY 1 cut(s) 511
PvuII CAGCTG 2 cut(s) 551, 947
RsaI GTAC 3 cut(s) 44, 766, 1154
RsaNI GTAC 3 cut(s) 43, 765, 1153
RseI CAYNNNNRTG 1 cut(s) 772
SacI GAGCTC 1 cut(s) 1012
SapI GCTCTTC 1 cut(s) 1106
SaqAI TTAA 7 cut(s) 656, 693, 1053, 1101, 1226, 1283, 1382
SatI GCNGC 6 cut(s) 140, 179, 732, 945, 948, 1298
Sau3AI GATC 3 cut(s) 511, 810, 1165
Sau96I GGNCC 4 cut(s) 131, 272, 369, 1019
SchI GAGTC 1 cut(s) 347
ScrFI CCNGG 3 cut(s) 218, 256, 815
SduI GDGCHC 4 cut(s) 40, 384, 615, 1012
SexAI ACCWGGT 1 cut(s) 254
SfaNI GCATC 4 cut(s) 454, 574, 964, 1047
SfcI CTRYAG 1 cut(s) 546
SinI GGWCC 2 cut(s) 272, 1019
SmiMI CAYNNNNRTG 1 cut(s) 772
SpeI ACTAGT 1 cut(s) 802
SphI GCATGC 1 cut(s) 293
SsiI CCGC 2 cut(s) 137, 1032
SspMI CTAG 8 cut(s) 114, 366, 560, 803, 1170, 1386, 1421, 1445
SstI GAGCTC 1 cut(s) 1012
StyD4I CCNGG 3 cut(s) 216, 254, 813
TaaI ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1472
TaiI ACGT 2 cut(s) 618, 1466
TaqI TCGA 3 cut(s) 88, 564, 1071
TatI WGTACW 1 cut(s) 1152
TfiI GAWTC 4 cut(s) 169, 298, 415, 1073
Tru1I TTAA 7 cut(s) 656, 693, 1053, 1101, 1226, 1283, 1382
Tru9I TTAA 7 cut(s) 656, 693, 1053, 1101, 1226, 1283, 1382
TscAI CASTG 7 cut(s) 58, 522, 673, 724, 755, 991, 1282
TseFI GTSAC 2 cut(s) 49, 517
TseI GCWGC 6 cut(s) 139, 178, 731, 944, 947, 1297
Tsp45I GTSAC 2 cut(s) 49, 517
TspDTI ATGAA 8 cut(s) 307, 311, 488, 901, 947, 1016, 1087, 1367
TspGWI ACGGA 2 cut(s) 186, 192
TspRI CASTG 7 cut(s) 58, 522, 673, 724, 755, 991, 1282
Van91I CCANNNNNTGG 2 cut(s) 12, 1028
VpaK11BI GGWCC 2 cut(s) 272, 1019
VspI ATTAAT 1 cut(s) 1283
XapI RAATTY 4 cut(s) 75, 781, 907, 1410
XbaI TCTAGA 1 cut(s) 1420
XceI RCATGY 2 cut(s) 293, 1153
XspI CTAG 8 cut(s) 114, 366, 560, 803, 1170, 1386, 1421, 1445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.