Rmu_sc0003823.1_g000004

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003823.1
Physical Location & Seq
Forward (+)
27173 .. 31714
4542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003823.1_g000004.1.cds

Sequence Viewer

Length: 1293 bp
atgacttggaagctcttgaagcaagtccgagcaccgtacactgtcactgcctctacgagcccccaccgaattctaccccctcgattgctgaacttgcataatgccgctaggcttttctcaaatgggcctccgctgcctcctccttctggagagcctcctctgattcaactgctgcaaaaccctccctctccgtctccgtcgtcgctgaaccaggcagagcttgctaagtttgccaccatttccggaacctggtgggatttggaaggaccattcaaaccgttgcatgcaatgaatcctacaaggcttgccttcattcgctcaacactgtgccgtcatttcaggagggacccgttatctgctaggccctttgaagggctcagatttattgatgttggctgtggaggtgggattctttctgagcctttagctcggatgggagctattgtaacaggagttgatgctgttgagaaaaacatcaagatagctcgccttcacgcagacttggatccagtgacctcaaaaattgaatatcaatgcactacagctgaaaagctagtcgaggagcaaaagagttttgatgctgtgtttgctttagaggtggttgagcacgtggaaaatcctgctgatttctgtaaatctctgtcagccttaaccgttcccagtggagctaccgtgatttcaacaattaaccgttctatgagagcatatgccactgccataattgcagccgagtatctgctccactggcttcctaaaggtacacatcaatggtcaaattttcttactcctgaagaactagtcctgatcctggagcgtgcttctatttcagtccaagagatggctgggtttgcatacaaccctttgacaggaagatggtcaatatctgatgatgttagtgtacatttcatcgcttatgagcatgagatgaattgctcagcagctgcttggcatctggcgtcaactggcgtggatgtgtacactgcccttgctagagctgttggagctctatatggtccgcttcatggcggagcaaatgagcctgtgtttaaggtgccaactgaaatcgaatctgttgagaacattccagagttcattaagggtgtgaagagcaggaagcaaaagatgtcaggttttggccatcgcatgtacaagaactatgatcctagagcaaaggtagctgtttctttgaagaaagctcagtatctgacgagtattttgttaagagaaagcaggtattttgatggttttattcccgatgcttttgaatcagctctgccatgtgactccttttga

Protein Analysis

430

Amino Acids

47.46

Weight (kDa)

7.69

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1221
AccB1I GGYRCC 1 cut(s) 1051
AccB7I CCANNNNNTGG 1 cut(s) 838
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 4 cut(s) 105, 131, 1016, 1026
AclWI GGATC 4 cut(s) 500, 513, 799, 1154
AcoI YGGCCR 1 cut(s) 1135
AcsI RAATTY 2 cut(s) 69, 775
AcuI CTGAAG 1 cut(s) 810
AcvI CACGTG 1 cut(s) 610
AcyI GRCGYC 1 cut(s) 956
AfaI GTAC 5 cut(s) 38, 760, 900, 977, 1148
AfiI CCNNNNNNNGG 8 cut(s) 146, 249, 371, 372, 808, 838, 866, 1022
AgsI TTSAA 8 cut(s) 19, 167, 274, 371, 527, 681, 1189, 1265
AhlI ACTAGT 1 cut(s) 796
AjnI CCWGG 3 cut(s) 210, 248, 807
Alw21I GWGCWC 3 cut(s) 34, 609, 1006
Alw26I GTCTC 1 cut(s) 198
AlwI GGATC 4 cut(s) 500, 513, 799, 1154
AlwNI CAGNNNCTG 2 cut(s) 941, 1204
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 3 cut(s) 125, 362, 1135
ApeKI GCWGC 5 cut(s) 133, 172, 725, 938, 941
ApoI RAATTY 2 cut(s) 69, 775
ArsI GACNNNNNNTTYG 2 cut(s) 1198, 1230
AspS9I GGNCC 5 cut(s) 125, 266, 346, 363, 1013
AvaII GGWCC 3 cut(s) 266, 346, 1013
BalI TGGCCA 1 cut(s) 1137
BamHI GGATCC 1 cut(s) 505
BanI GGYRCC 1 cut(s) 1051
BanII GRGCYC 3 cut(s) 62, 378, 1006
BbrPI CACGTG 1 cut(s) 610
Bbv12I GWGCWC 3 cut(s) 34, 609, 1006
BbvI GCAGC 5 cut(s) 120, 159, 737, 928, 950
BccI CCATC 5 cut(s) 427, 832, 867, 1146, 1235
BceAI ACGGC 1 cut(s) 315
BciT130I CCWGG 3 cut(s) 212, 250, 809
BcoDI GTCTC 1 cut(s) 198
BcuI ACTAGT 1 cut(s) 796
BfaI CTAG 6 cut(s) 108, 360, 554, 797, 990, 1164
BfmI CTRYAG 1 cut(s) 540
BfuAI ACCTGC 1 cut(s) 1221
BisI GCNGC 6 cut(s) 105, 134, 173, 726, 939, 942
BlpI GCTNAGC 1 cut(s) 934
BlsI GCNGC 6 cut(s) 106, 135, 174, 727, 940, 943
Bme1390I CCNGG 3 cut(s) 212, 250, 809
Bme18I GGWCC 3 cut(s) 266, 346, 1013
BmgT120I GGNCC 5 cut(s) 125, 266, 346, 363, 1013
BmiI GGNNCC 5 cut(s) 247, 347, 348, 507, 1053
BmrFI CCNGG 3 cut(s) 212, 250, 809
BmrI ACTGGG 1 cut(s) 654
BmsI GCATC 4 cut(s) 448, 568, 958, 1246
BmuI ACTGGG 1 cut(s) 654
BpmI CTGGAG 2 cut(s) 168, 830
Bpu1102I GCTNAGC 1 cut(s) 934
BsaAI YACGTR 1 cut(s) 610
BsaHI GRCGYC 1 cut(s) 956
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 4 cut(s) 429, 459, 657, 687
Bsc4I CCNNNNNNNGG 8 cut(s) 146, 249, 371, 372, 808, 838, 866, 1022
Bse1I ACTGG 4 cut(s) 509, 660, 749, 967
Bse3DI GCAATG 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 3 cut(s) 212, 250, 809
BseGI GGATG 2 cut(s) 438, 976
BseLI CCNNNNNNNGG 8 cut(s) 146, 249, 371, 372, 808, 838, 866, 1022
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 4 cut(s) 391, 408, 948, 1211
BseNI ACTGG 4 cut(s) 509, 660, 749, 967
BseRI GAGGAG 3 cut(s) 129, 147, 575
BseXI GCAGC 5 cut(s) 120, 159, 737, 928, 950
BseYI CCCAGC 1 cut(s) 842
BshFI GGCC 3 cut(s) 127, 364, 1137
BshNI GGYRCC 1 cut(s) 1051
BsiHKAI GWGCWC 3 cut(s) 34, 609, 1006
BsiSI CCGG 1 cut(s) 243
BslFI GGGAC 1 cut(s) 359
BslI CCNNNNNNNGG 8 cut(s) 146, 249, 371, 372, 808, 838, 866, 1022
BsmAI GTCTC 1 cut(s) 198
BsmBI CGTCTC 1 cut(s) 198
BsmFI GGGAC 1 cut(s) 359
BsnI GGCC 3 cut(s) 127, 364, 1137
Bsp1286I GDGCHC 5 cut(s) 34, 62, 378, 609, 1006
Bsp13I TCCGGA 1 cut(s) 242
Bsp1407I TGTACA 3 cut(s) 898, 975, 1146
Bsp143I GATC 3 cut(s) 505, 804, 1159
Bsp1720I GCTNAGC 1 cut(s) 934
BspACI CCGC 4 cut(s) 105, 131, 1016, 1026
BspANI GGCC 3 cut(s) 127, 364, 1137
BspCNI CTCAG 4 cut(s) 390, 409, 947, 1210
BspEI TCCGGA 1 cut(s) 242
BspLI GGNNCC 5 cut(s) 247, 347, 348, 507, 1053
BspMI ACCTGC 1 cut(s) 1221
BspPI GGATC 4 cut(s) 500, 513, 799, 1154
BspQI GCTCTTC 1 cut(s) 1100
BspT107I GGYRCC 1 cut(s) 1051
BsrDI GCAATG 1 cut(s) 294
BsrGI TGTACA 3 cut(s) 898, 975, 1146
BsrI ACTGG 4 cut(s) 509, 660, 749, 967
BssMI GATC 3 cut(s) 505, 804, 1159
BssNI GRCGYC 1 cut(s) 956
Bst2UI CCWGG 3 cut(s) 212, 250, 809
Bst4CI ACNGT 7 cut(s) 36, 43, 279, 327, 655, 673, 692
Bst6I CTCTTC 1 cut(s) 1100
BstACI GRCGYC 1 cut(s) 956
BstAPI GCANNNNNTGC 1 cut(s) 221
BstAUI TGTACA 3 cut(s) 898, 975, 1146
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 5 cut(s) 222, 285, 306, 487, 816
BstDEI CTNAG 5 cut(s) 225, 377, 417, 934, 1197
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 2 cut(s) 438, 976
BstKTI GATC 3 cut(s) 508, 807, 1162
BstMAI GTCTC 1 cut(s) 198
BstMBI GATC 3 cut(s) 505, 804, 1159
BstNI CCWGG 3 cut(s) 212, 250, 809
BstNSI RCATGY 2 cut(s) 287, 1147
BstSCI CCNGG 3 cut(s) 210, 248, 807
BstSFI CTRYAG 1 cut(s) 540
BstV1I GCAGC 5 cut(s) 120, 159, 737, 928, 950
BstX2I RGATCY 1 cut(s) 505
BstYI RGATCY 1 cut(s) 505
BsuRI GGCC 3 cut(s) 127, 364, 1137
BtgZI GCGATG 2 cut(s) 892, 1124
BtsCI GGATG 2 cut(s) 438, 976
BtsI GCAGTG 3 cut(s) 45, 711, 978
BtsIMutI CAGTG 8 cut(s) 39, 45, 323, 516, 667, 711, 742, 978
BveI ACCTGC 1 cut(s) 1221
Cac8I GCNNGC 5 cut(s) 222, 285, 306, 487, 816
CaiI CAGNNNCTG 2 cut(s) 941, 1204
Cfr13I GGNCC 5 cut(s) 125, 266, 346, 363, 1013
CseI GACGC 1 cut(s) 945
CsiI ACCWGGT 1 cut(s) 248
Csp6I GTAC 5 cut(s) 37, 759, 899, 976, 1147
CspCI CAANNNNNGTGG 2 cut(s) 948, 983
CviAII CATG 5 cut(s) 284, 920, 1022, 1144, 1278
CviQI GTAC 5 cut(s) 37, 759, 899, 976, 1147
DdeI CTNAG 5 cut(s) 225, 377, 417, 934, 1197
DpnI GATC 3 cut(s) 507, 806, 1161
DpnII GATC 3 cut(s) 505, 804, 1159
EaeI YGGCCR 1 cut(s) 1135
Eam1104I CTCTTC 1 cut(s) 1100
EarI CTCTTC 1 cut(s) 1100
EciI GGCGGA 1 cut(s) 1041
Ecl136II GAGCTC 1 cut(s) 1004
Eco24I GRGCYC 3 cut(s) 62, 378, 1006
Eco47I GGWCC 3 cut(s) 266, 346, 1013
Eco53kI GAGCTC 1 cut(s) 1004
Eco57I CTGAAG 1 cut(s) 810
Eco72I CACGTG 1 cut(s) 610
EcoICRI GAGCTC 1 cut(s) 1004
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoO109I RGGNCCY 2 cut(s) 346, 363
EcoRI GAATTC 1 cut(s) 69
EcoRII CCWGG 3 cut(s) 210, 248, 807
EcoT38I GRGCYC 3 cut(s) 62, 378, 1006
Esp3I CGTCTC 1 cut(s) 198
FaeI CATG 5 cut(s) 287, 923, 1025, 1147, 1281
FaqI GGGAC 1 cut(s) 359
FatI CATG 5 cut(s) 283, 919, 1021, 1143, 1277
FauNDI CATATG 1 cut(s) 706
Fnu4HI GCNGC 6 cut(s) 105, 134, 173, 726, 939, 942
FokI GGATG 2 cut(s) 445, 983
FriOI GRGCYC 3 cut(s) 62, 378, 1006
Fsp4HI GCNGC 6 cut(s) 105, 134, 173, 726, 939, 942
FspBI CTAG 6 cut(s) 108, 360, 554, 797, 990, 1164
GluI GCNGC 6 cut(s) 105, 134, 173, 726, 939, 942
GsaI CCCAGC 1 cut(s) 846
GsuI CTGGAG 2 cut(s) 168, 830
HaeIII GGCC 3 cut(s) 127, 364, 1137
HapII CCGG 1 cut(s) 243
HgaI GACGC 1 cut(s) 945
Hin1I GRCGYC 1 cut(s) 956
Hin1II CATG 5 cut(s) 287, 923, 1025, 1147, 1281
HincII GTYRAC 1 cut(s) 960
HindII GTYRAC 1 cut(s) 960
HinfI GANTC 6 cut(s) 163, 292, 409, 1067, 1265, 1283
HpaII CCGG 1 cut(s) 243
Hpy166II GTNNAC 6 cut(s) 39, 761, 899, 960, 976, 978
Hpy188I TCNGA 7 cut(s) 29, 162, 380, 418, 432, 886, 1206
Hpy188III TCNNGA 9 cut(s) 16, 147, 243, 340, 478, 788, 802, 1085, 1253
Hpy8I GTNNAC 6 cut(s) 39, 761, 899, 960, 976, 978
Hpy99I CGWCG 2 cut(s) 202, 205
HpyAV CCTTC 5 cut(s) 153, 257, 319, 365, 500
HpyCH4III ACNGT 7 cut(s) 36, 43, 279, 327, 655, 673, 692
HpyCH4IV ACGT 1 cut(s) 609
HpyCH4V TGCA 7 cut(s) 97, 175, 283, 287, 537, 725, 851
HpyF3I CTNAG 5 cut(s) 225, 377, 417, 934, 1197
HpySE526I ACGT 1 cut(s) 609
Hsp92I GRCGYC 1 cut(s) 956
Hsp92II CATG 5 cut(s) 287, 923, 1025, 1147, 1281
KflI GGGWCCC 1 cut(s) 346
Kpn2I TCCGGA 1 cut(s) 242
Kzo9I GATC 3 cut(s) 505, 804, 1159
LguI GCTCTTC 1 cut(s) 1100
LmnI GCTCC 7 cut(s) 437, 562, 665, 744, 811, 1001, 1028
Lsp1109I GCAGC 5 cut(s) 120, 159, 737, 928, 950
LweI GCATC 4 cut(s) 448, 568, 958, 1246
MabI ACCWGGT 1 cut(s) 248
MaeI CTAG 6 cut(s) 108, 360, 554, 797, 990, 1164
MaeII ACGT 1 cut(s) 609
MaeIII GTNAC 4 cut(s) 43, 445, 511, 1280
MalI GATC 3 cut(s) 507, 806, 1161
MboI GATC 3 cut(s) 505, 804, 1159
MboII GAAGA 4 cut(s) 803, 882, 1117, 1201
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 5 cut(s) 34, 62, 378, 609, 1006
MlsI TGGCCA 1 cut(s) 1137
MluCI AATT 6 cut(s) 69, 522, 684, 720, 775, 928
MluNI TGGCCA 1 cut(s) 1137
MlyI GAGTC 1 cut(s) 1277
MmeI TCCRAC 1 cut(s) 979
Mox20I TGGCCA 1 cut(s) 1137
MroI TCCGGA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 1137
MseI TTAA 5 cut(s) 650, 687, 1047, 1095, 1220
MslI CAYNNNNRTG 1 cut(s) 766
Msp20I TGGCCA 1 cut(s) 1137
MspA1I CMGCKG 3 cut(s) 133, 545, 941
MspI CCGG 1 cut(s) 243
MspR9I CCNGG 3 cut(s) 212, 250, 809
MvaI CCWGG 3 cut(s) 212, 250, 809
NdeI CATATG 1 cut(s) 706
NdeII GATC 3 cut(s) 505, 804, 1159
NlaIII CATG 5 cut(s) 287, 923, 1025, 1147, 1281
NlaIV GGNNCC 5 cut(s) 247, 347, 348, 507, 1053
NmeAIII GCCGAG 1 cut(s) 754
NmuCI GTSAC 3 cut(s) 43, 511, 1280
NspI RCATGY 2 cut(s) 287, 1147
PaeI GCATGC 1 cut(s) 287
PciSI GCTCTTC 1 cut(s) 1100
PfeI GAWTC 5 cut(s) 163, 292, 409, 1067, 1265
PflMI CCANNNNNTGG 1 cut(s) 838
PfoI TCCNGGA 1 cut(s) 807
PkrI GCNGC 6 cut(s) 106, 135, 174, 727, 940, 943
PleI GAGTC 1 cut(s) 1277
PmaCI CACGTG 1 cut(s) 610
PmlI CACGTG 1 cut(s) 610
PpsI GAGTC 1 cut(s) 1277
Ppu21I YACGTR 1 cut(s) 610
PpuMI RGGWCCY 1 cut(s) 346
Psp124BI GAGCTC 1 cut(s) 1006
Psp5II RGGWCCY 1 cut(s) 346
Psp6I CCWGG 3 cut(s) 210, 248, 807
PspCI CACGTG 1 cut(s) 610
PspFI CCCAGC 1 cut(s) 842
PspGI CCWGG 3 cut(s) 210, 248, 807
PspN4I GGNNCC 5 cut(s) 247, 347, 348, 507, 1053
PspPI GGNCC 5 cut(s) 125, 266, 346, 363, 1013
PspPPI RGGWCCY 1 cut(s) 346
PstNI CAGNNNCTG 2 cut(s) 941, 1204
PsuI RGATCY 1 cut(s) 505
PvuII CAGCTG 2 cut(s) 545, 941
RsaI GTAC 5 cut(s) 38, 760, 900, 977, 1148
RsaNI GTAC 5 cut(s) 37, 759, 899, 976, 1147
RseI CAYNNNNRTG 1 cut(s) 766
SacI GAGCTC 1 cut(s) 1006
SapI GCTCTTC 1 cut(s) 1100
SaqAI TTAA 5 cut(s) 650, 687, 1047, 1095, 1220
SatI GCNGC 6 cut(s) 105, 134, 173, 726, 939, 942
Sau3AI GATC 3 cut(s) 505, 804, 1159
Sau96I GGNCC 5 cut(s) 125, 266, 346, 363, 1013
SchI GAGTC 1 cut(s) 1277
ScrFI CCNGG 3 cut(s) 212, 250, 809
SduI GDGCHC 5 cut(s) 34, 62, 378, 609, 1006
SexAI ACCWGGT 1 cut(s) 248
SfaNI GCATC 4 cut(s) 448, 568, 958, 1246
SfcI CTRYAG 1 cut(s) 540
SinI GGWCC 3 cut(s) 266, 346, 1013
SmiMI CAYNNNNRTG 1 cut(s) 766
SpeI ACTAGT 1 cut(s) 796
SphI GCATGC 1 cut(s) 287
Sse9I AATT 6 cut(s) 69, 522, 684, 720, 775, 928
SsiI CCGC 4 cut(s) 105, 131, 1016, 1026
SspMI CTAG 6 cut(s) 108, 360, 554, 797, 990, 1164
SstI GAGCTC 1 cut(s) 1006
StyD4I CCNGG 3 cut(s) 210, 248, 807
TaaI ACNGT 7 cut(s) 36, 43, 279, 327, 655, 673, 692
TaiI ACGT 1 cut(s) 612
TaqI TCGA 3 cut(s) 82, 558, 1065
TasI AATT 6 cut(s) 69, 522, 684, 720, 775, 928
TatI WGTACW 3 cut(s) 898, 975, 1146
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 5 cut(s) 163, 292, 409, 1067, 1265
Tru1I TTAA 5 cut(s) 650, 687, 1047, 1095, 1220
Tru9I TTAA 5 cut(s) 650, 687, 1047, 1095, 1220
TscAI CASTG 8 cut(s) 46, 52, 330, 516, 667, 718, 749, 985
TseFI GTSAC 3 cut(s) 43, 511, 1280
TseI GCWGC 5 cut(s) 133, 172, 725, 938, 941
Tsp45I GTSAC 3 cut(s) 43, 511, 1280
TspDTI ATGAA 6 cut(s) 301, 305, 895, 941, 1010, 1081
TspGWI ACGGA 2 cut(s) 180, 186
TspRI CASTG 8 cut(s) 46, 52, 330, 516, 667, 718, 749, 985
Van91I CCANNNNNTGG 1 cut(s) 838
VpaK11BI GGWCC 3 cut(s) 266, 346, 1013
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 2 cut(s) 69, 775
XceI RCATGY 2 cut(s) 287, 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 839
XspI CTAG 6 cut(s) 108, 360, 554, 797, 990, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.