RLG00000002354

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
32654755 .. 32659295
4541 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002354

Sequence Viewer

Length: 1296 bp
ATGGCCATGACTTGGAAGCTCTTGAAGCAAGTCCGAGCACCGTACACCGTCACTGCCTCTACGAGCCTCCACCGAATTCTACCCCCTCGATTGCTGAACTTGCATAATGCCACTAGGCTTTTCTCAAATGGGCCTCCGCTGCCTCCTCCTTCTGGAGAGCCTCCTCTGATTCAACTGCTGCAAAACCCTCCCTCTCCGTCTCCGTCGTCGCTGAACCAGGCAGAGCTTGCTAAGTTTGCCACCATTTCCGGAACCTGGTGGGATTTGGAAGGACCATTCAAACCGTTGCATGCAATGAATCCTACAAGGCTTGCCTTCATTCGCTCAACGCTGTGCCGTCATTTCAGGAGGGACTCGTTATCTGCTAGGCCCTTTGAAGGGCTCAGATTTATTGATGTTGGCTGTGGAGGTGGGATTCTTTCTGAGCCTTTAGCTCGGATGGGAGCTATTGTAACAGGAGTTGATGCTGTTGAGAAAAACATCAAGATAGCTCGCCTTCATGCAGACTTGGATCCAGTGACCTCAAAAATTGAATATCAATGCACTACAGCTGAAAAGCTAGTCGAGGAGCAAAAGAGTTTTGATGCTGTGTTTGCTTTAGAGGTGATTGAGCACGTGGAAAATCCTGCTGATTTCTGTAAATCTCTGTCAGCCTTAACTGTTCCCAGTGGAGCTACCGTGATTTCAACAATTAACCGTTCTATGAGAGCTTATGCCACTGCTATAATTGCAGCCGAGTATCTGCTCCACTGGCTTCCTAAAGGTACACATCAATGGTCAAATTTTCTTACTCCTGAAGAACTAGTCCTGATCCTGGAGCGTGCTTCTATTTCAGTCAAAGAGATGGCTGGCTTTGCATACAACCCTTTGACAGAAAGATGGTCAATATCTGATGATGTTAGTGTAAATTTCATCGCTTATGAGCATGAGATGAATTGCTCAGCAGCTGCTTGGCATCTGGCGTCAAGTGGCATGGATGTTTACACTGCCCTTGCTGGAGCTGTTGGAGCTCTATATGGTCCACTTCATGGCGGAGCAAATGAGCCTGTGTTTAAGATGCCAACTGAAATCGAATCTGTTGAGGACATTCCAGAGTTCATTAAGGGTGTGAAGAGCAGGAAGCAAAAGATGTCAGGTTTTGGCCATCGCATGTACAAGAACTATGATCCTAGAGCAAAGGTAGCTGTTGCTTTGAAGAAAGCTCAGTATCTGACGAGTATTTTGTTAAGAGAAAGCAGGTATTTTGACGGTTTTATTCCCAATGCCTTTGAATCAGCTCCGCCATGTGACTCCTAG

Protein Analysis

432

Amino Acids

47.54

Weight (kDa)

7.19

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_23 PF13489 116 - 275 2.8e-19 Methyltransferase domain
Methyltransf_31 PF13847 126 - 259 9e-13 Methyltransferase domain
CMAS PF02353 126 - 237 7.8e-06 Mycolic acid cyclopropane synthetase
PrmA PF06325 129 - 231 3.8e-06 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_11 PF08241 131 - 227 8.2e-19 Methyltransferase domain
Methyltransf_25 PF13649 131 - 224 2.8e-14 Methyltransferase domain
Methyltransf_12 PF08242 131 - 224 1.1e-10 Methyltransferase domain
Citrate_synt PF00285 305 - 396 6.1e-33 Citrate synthase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1227
AccB7I CCANNNNNTGG 2 cut(s) 12, 1028
AccIII TCCGGA 1 cut(s) 248
AciI CCGC 3 cut(s) 137, 1032, 1280
AclWI GGATC 4 cut(s) 506, 519, 805, 1160
AcoI YGGCCR 2 cut(s) 3, 1141
AcsI RAATTY 3 cut(s) 75, 781, 907
AcuI CTGAAG 1 cut(s) 816
AcvI CACGTG 1 cut(s) 616
AcyI GRCGYC 1 cut(s) 962
AfaI GTAC 3 cut(s) 44, 766, 1154
AfiI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
AgsI TTSAA 8 cut(s) 25, 173, 280, 377, 533, 687, 1195, 1271
AhlI ACTAGT 1 cut(s) 802
AjnI CCWGG 3 cut(s) 216, 254, 813
Alw21I GWGCWC 3 cut(s) 40, 615, 1012
Alw26I GTCTC 1 cut(s) 204
AlwI GGATC 4 cut(s) 506, 519, 805, 1160
AlwNI CAGNNNCTG 2 cut(s) 947, 1210
Aor13HI TCCGGA 1 cut(s) 248
AoxI GGCC 4 cut(s) 3, 131, 368, 1141
ApeKI GCWGC 5 cut(s) 139, 178, 731, 944, 947
ApoI RAATTY 3 cut(s) 75, 781, 907
ArsI GACNNNNNNTTYG 2 cut(s) 1204, 1236
AspS9I GGNCC 4 cut(s) 131, 272, 369, 1019
AsuHPI GGTGA 1 cut(s) 616
AvaII GGWCC 2 cut(s) 272, 1019
BalI TGGCCA 2 cut(s) 5, 1143
BamHI GGATCC 1 cut(s) 511
BanII GRGCYC 2 cut(s) 384, 1012
BbrPI CACGTG 1 cut(s) 616
Bbv12I GWGCWC 3 cut(s) 40, 615, 1012
BbvI GCAGC 5 cut(s) 126, 165, 743, 934, 956
BccI CCATC 4 cut(s) 433, 838, 873, 1152
BceAI ACGGC 1 cut(s) 321
BciT130I CCWGG 3 cut(s) 218, 256, 815
BcoDI GTCTC 1 cut(s) 204
BcuI ACTAGT 1 cut(s) 802
BfaI CTAG 6 cut(s) 114, 366, 560, 803, 1170, 1294
BfmI CTRYAG 1 cut(s) 546
BfuAI ACCTGC 1 cut(s) 1227
BisI GCNGC 5 cut(s) 140, 179, 732, 945, 948
BlpI GCTNAGC 1 cut(s) 940
BlsI GCNGC 5 cut(s) 141, 180, 733, 946, 949
Bme1390I CCNGG 3 cut(s) 218, 256, 815
Bme18I GGWCC 2 cut(s) 272, 1019
BmgT120I GGNCC 4 cut(s) 131, 272, 369, 1019
BmiI GGNNCC 2 cut(s) 253, 513
BmrFI CCNGG 3 cut(s) 218, 256, 815
BmrI ACTGGG 1 cut(s) 660
BmsI GCATC 4 cut(s) 454, 574, 964, 1047
BmuI ACTGGG 1 cut(s) 660
BpmI CTGGAG 3 cut(s) 174, 836, 1017
Bpu1102I GCTNAGC 1 cut(s) 940
BsaAI YACGTR 1 cut(s) 616
BsaHI GRCGYC 1 cut(s) 962
BsaWI WCCGGW 1 cut(s) 248
BsaXI ACNNNNNCTCC 4 cut(s) 435, 465, 663, 693
Bsc4I CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
Bse1I ACTGG 3 cut(s) 515, 666, 755
Bse3DI GCAATG 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 248
BseBI CCWGG 3 cut(s) 218, 256, 815
BseGI GGATG 2 cut(s) 444, 982
BseLI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
BseMI GCAATG 1 cut(s) 300
BseMII CTCAG 4 cut(s) 397, 414, 954, 1217
BseNI ACTGG 3 cut(s) 515, 666, 755
BseRI GAGGAG 3 cut(s) 135, 153, 581
BseXI GCAGC 5 cut(s) 126, 165, 743, 934, 956
BshFI GGCC 4 cut(s) 5, 133, 370, 1143
BsiHKAI GWGCWC 3 cut(s) 40, 615, 1012
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 1 cut(s) 365
BslI CCNNNNNNNGG 7 cut(s) 12, 152, 255, 377, 378, 814, 1028
BsmAI GTCTC 1 cut(s) 204
BsmBI CGTCTC 1 cut(s) 204
BsmFI GGGAC 1 cut(s) 365
BsnI GGCC 4 cut(s) 5, 133, 370, 1143
Bsp1286I GDGCHC 4 cut(s) 40, 384, 615, 1012
Bsp13I TCCGGA 1 cut(s) 248
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 3 cut(s) 511, 810, 1165
Bsp1720I GCTNAGC 1 cut(s) 940
BspACI CCGC 3 cut(s) 137, 1032, 1280
BspANI GGCC 4 cut(s) 5, 133, 370, 1143
BspCNI CTCAG 4 cut(s) 396, 415, 953, 1216
BspEI TCCGGA 1 cut(s) 248
BspLI GGNNCC 2 cut(s) 253, 513
BspMI ACCTGC 1 cut(s) 1227
BspPI GGATC 4 cut(s) 506, 519, 805, 1160
BspQI GCTCTTC 1 cut(s) 1106
BsrDI GCAATG 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 3 cut(s) 515, 666, 755
BssMI GATC 3 cut(s) 511, 810, 1165
BssNI GRCGYC 1 cut(s) 962
Bst2UI CCWGG 3 cut(s) 218, 256, 815
Bst4CI ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1250
Bst6I CTCTTC 1 cut(s) 1106
BstACI GRCGYC 1 cut(s) 962
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 1152
BstBAI YACGTR 1 cut(s) 616
BstC8I GCNNGC 6 cut(s) 228, 291, 312, 493, 822, 850
BstDEI CTNAG 5 cut(s) 231, 383, 423, 940, 1203
BstF5I GGATG 2 cut(s) 444, 982
BstKTI GATC 3 cut(s) 514, 813, 1168
BstMAI GTCTC 1 cut(s) 204
BstMBI GATC 3 cut(s) 511, 810, 1165
BstNI CCWGG 3 cut(s) 218, 256, 815
BstNSI RCATGY 2 cut(s) 293, 1153
BstSCI CCNGG 3 cut(s) 216, 254, 813
BstSFI CTRYAG 1 cut(s) 546
BstV1I GCAGC 5 cut(s) 126, 165, 743, 934, 956
BstX2I RGATCY 1 cut(s) 511
BstYI RGATCY 1 cut(s) 511
BsuRI GGCC 4 cut(s) 5, 133, 370, 1143
BtgZI GCGATG 2 cut(s) 898, 1130
BtsCI GGATG 2 cut(s) 444, 982
BtsI GCAGTG 3 cut(s) 51, 717, 984
BtsIMutI CAGTG 6 cut(s) 51, 522, 673, 717, 748, 984
BveI ACCTGC 1 cut(s) 1227
Cac8I GCNNGC 6 cut(s) 228, 291, 312, 493, 822, 850
CaiI CAGNNNCTG 2 cut(s) 947, 1210
Cfr13I GGNCC 4 cut(s) 131, 272, 369, 1019
CseI GACGC 1 cut(s) 951
CsiI ACCWGGT 1 cut(s) 254
Csp6I GTAC 3 cut(s) 43, 765, 1153
CviAII CATG 8 cut(s) 7, 290, 500, 926, 973, 1028, 1150, 1284
CviQI GTAC 3 cut(s) 43, 765, 1153
DdeI CTNAG 5 cut(s) 231, 383, 423, 940, 1203
DpnI GATC 3 cut(s) 513, 812, 1167
DpnII GATC 3 cut(s) 511, 810, 1165
EaeI YGGCCR 2 cut(s) 3, 1141
Eam1104I CTCTTC 1 cut(s) 1106
EarI CTCTTC 1 cut(s) 1106
EciI GGCGGA 2 cut(s) 1047, 1269
Ecl136II GAGCTC 1 cut(s) 1010
Eco24I GRGCYC 2 cut(s) 384, 1012
Eco47I GGWCC 2 cut(s) 272, 1019
Eco53kI GAGCTC 1 cut(s) 1010
Eco57I CTGAAG 1 cut(s) 816
Eco72I CACGTG 1 cut(s) 616
EcoICRI GAGCTC 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 369
EcoRI GAATTC 1 cut(s) 75
EcoRII CCWGG 3 cut(s) 216, 254, 813
EcoT38I GRGCYC 2 cut(s) 384, 1012
Esp3I CGTCTC 1 cut(s) 204
FaeI CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1287
FaqI GGGAC 1 cut(s) 365
FatI CATG 8 cut(s) 6, 289, 499, 925, 972, 1027, 1149, 1283
Fnu4HI GCNGC 5 cut(s) 140, 179, 732, 945, 948
FokI GGATG 2 cut(s) 451, 989
FriOI GRGCYC 2 cut(s) 384, 1012
Fsp4HI GCNGC 5 cut(s) 140, 179, 732, 945, 948
FspBI CTAG 6 cut(s) 114, 366, 560, 803, 1170, 1294
GluI GCNGC 5 cut(s) 140, 179, 732, 945, 948
GsuI CTGGAG 3 cut(s) 174, 836, 1017
HaeIII GGCC 4 cut(s) 5, 133, 370, 1143
HapII CCGG 1 cut(s) 249
HgaI GACGC 1 cut(s) 951
Hin1I GRCGYC 1 cut(s) 962
Hin1II CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1287
HinfI GANTC 7 cut(s) 169, 298, 353, 415, 1073, 1271, 1289
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 616
Hpy166II GTNNAC 4 cut(s) 45, 767, 982, 1022
Hpy188I TCNGA 7 cut(s) 35, 168, 386, 424, 438, 892, 1212
Hpy188III TCNNGA 8 cut(s) 22, 153, 249, 346, 484, 794, 808, 1091
Hpy8I GTNNAC 4 cut(s) 45, 767, 982, 1022
Hpy99I CGWCG 2 cut(s) 208, 211
HpyAV CCTTC 5 cut(s) 159, 263, 325, 371, 506
HpyCH4III ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1250
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 8 cut(s) 103, 181, 289, 293, 503, 543, 731, 857
HpyF3I CTNAG 5 cut(s) 231, 383, 423, 940, 1203
HpySE526I ACGT 1 cut(s) 615
Hsp92I GRCGYC 1 cut(s) 962
Hsp92II CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1287
Kpn2I TCCGGA 1 cut(s) 248
Kzo9I GATC 3 cut(s) 511, 810, 1165
LguI GCTCTTC 1 cut(s) 1106
LmnI GCTCC 9 cut(s) 443, 568, 671, 750, 817, 998, 1007, 1034, 1282
Lsp1109I GCAGC 5 cut(s) 126, 165, 743, 934, 956
LweI GCATC 4 cut(s) 454, 574, 964, 1047
MabI ACCWGGT 1 cut(s) 254
MaeI CTAG 6 cut(s) 114, 366, 560, 803, 1170, 1294
MaeII ACGT 1 cut(s) 615
MaeIII GTNAC 4 cut(s) 49, 451, 517, 1286
MalI GATC 3 cut(s) 513, 812, 1167
MboI GATC 3 cut(s) 511, 810, 1165
MboII GAAGA 3 cut(s) 809, 1123, 1207
MflI RGATCY 1 cut(s) 511
MhlI GDGCHC 4 cut(s) 40, 384, 615, 1012
MlsI TGGCCA 2 cut(s) 5, 1143
MluCI AATT 7 cut(s) 75, 528, 690, 726, 781, 907, 934
MluNI TGGCCA 2 cut(s) 5, 1143
MlyI GAGTC 2 cut(s) 347, 1283
MmeI TCCRAC 1 cut(s) 985
Mox20I TGGCCA 2 cut(s) 5, 1143
MroI TCCGGA 1 cut(s) 248
MscI TGGCCA 2 cut(s) 5, 1143
MseI TTAA 5 cut(s) 656, 693, 1053, 1101, 1226
MslI CAYNNNNRTG 1 cut(s) 772
Msp20I TGGCCA 2 cut(s) 5, 1143
MspA1I CMGCKG 3 cut(s) 139, 551, 947
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 3 cut(s) 218, 256, 815
MvaI CCWGG 3 cut(s) 218, 256, 815
NdeII GATC 3 cut(s) 511, 810, 1165
NlaIII CATG 8 cut(s) 10, 293, 503, 929, 976, 1031, 1153, 1287
NlaIV GGNNCC 2 cut(s) 253, 513
NmeAIII GCCGAG 1 cut(s) 760
NmuCI GTSAC 3 cut(s) 49, 517, 1286
NspI RCATGY 2 cut(s) 293, 1153
PaeI GCATGC 1 cut(s) 293
PciSI GCTCTTC 1 cut(s) 1106
PfeI GAWTC 5 cut(s) 169, 298, 415, 1073, 1271
PflMI CCANNNNNTGG 2 cut(s) 12, 1028
PfoI TCCNGGA 1 cut(s) 813
PkrI GCNGC 5 cut(s) 141, 180, 733, 946, 949
PleI GAGTC 2 cut(s) 347, 1283
PmaCI CACGTG 1 cut(s) 616
PmlI CACGTG 1 cut(s) 616
PpsI GAGTC 2 cut(s) 347, 1283
Ppu21I YACGTR 1 cut(s) 616
Psp124BI GAGCTC 1 cut(s) 1012
Psp6I CCWGG 3 cut(s) 216, 254, 813
PspCI CACGTG 1 cut(s) 616
PspGI CCWGG 3 cut(s) 216, 254, 813
PspN4I GGNNCC 2 cut(s) 253, 513
PspPI GGNCC 4 cut(s) 131, 272, 369, 1019
PstNI CAGNNNCTG 2 cut(s) 947, 1210
PsuI RGATCY 1 cut(s) 511
PvuII CAGCTG 2 cut(s) 551, 947
RsaI GTAC 3 cut(s) 44, 766, 1154
RsaNI GTAC 3 cut(s) 43, 765, 1153
RseI CAYNNNNRTG 1 cut(s) 772
SacI GAGCTC 1 cut(s) 1012
SapI GCTCTTC 1 cut(s) 1106
SaqAI TTAA 5 cut(s) 656, 693, 1053, 1101, 1226
SatI GCNGC 5 cut(s) 140, 179, 732, 945, 948
Sau3AI GATC 3 cut(s) 511, 810, 1165
Sau96I GGNCC 4 cut(s) 131, 272, 369, 1019
SchI GAGTC 2 cut(s) 347, 1283
ScrFI CCNGG 3 cut(s) 218, 256, 815
SduI GDGCHC 4 cut(s) 40, 384, 615, 1012
SexAI ACCWGGT 1 cut(s) 254
SfaNI GCATC 4 cut(s) 454, 574, 964, 1047
SfcI CTRYAG 1 cut(s) 546
SinI GGWCC 2 cut(s) 272, 1019
SmiMI CAYNNNNRTG 1 cut(s) 772
SpeI ACTAGT 1 cut(s) 802
SphI GCATGC 1 cut(s) 293
Sse9I AATT 7 cut(s) 75, 528, 690, 726, 781, 907, 934
SsiI CCGC 3 cut(s) 137, 1032, 1280
SspMI CTAG 6 cut(s) 114, 366, 560, 803, 1170, 1294
SstI GAGCTC 1 cut(s) 1012
StyD4I CCNGG 3 cut(s) 216, 254, 813
TaaI ACNGT 7 cut(s) 42, 49, 285, 661, 679, 698, 1250
TaiI ACGT 1 cut(s) 618
TaqI TCGA 3 cut(s) 88, 564, 1071
TasI AATT 7 cut(s) 75, 528, 690, 726, 781, 907, 934
TatI WGTACW 1 cut(s) 1152
TfiI GAWTC 5 cut(s) 169, 298, 415, 1073, 1271
Tru1I TTAA 5 cut(s) 656, 693, 1053, 1101, 1226
Tru9I TTAA 5 cut(s) 656, 693, 1053, 1101, 1226
TscAI CASTG 6 cut(s) 58, 522, 673, 724, 755, 991
TseFI GTSAC 3 cut(s) 49, 517, 1286
TseI GCWGC 5 cut(s) 139, 178, 731, 944, 947
Tsp45I GTSAC 3 cut(s) 49, 517, 1286
TspDTI ATGAA 7 cut(s) 307, 311, 488, 901, 947, 1016, 1087
TspGWI ACGGA 2 cut(s) 186, 192
TspRI CASTG 6 cut(s) 58, 522, 673, 724, 755, 991
Van91I CCANNNNNTGG 2 cut(s) 12, 1028
VpaK11BI GGWCC 2 cut(s) 272, 1019
XapI RAATTY 3 cut(s) 75, 781, 907
XceI RCATGY 2 cut(s) 293, 1153
XspI CTAG 6 cut(s) 114, 366, 560, 803, 1170, 1294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.