Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003217

Physical Location & Seq

Genomic Coordinates Reverse (-)

32093435 .. 32101520

Gene Structure 8086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00240410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGGAGATACTGAGGGTACAATCAAGTGTAAGAAGACAGTTTTTGTGACTGTTGGAACTACTAGTTTTGATGCTCTAGTGAAAGCGGTGGATACAGAAGAGGTTAAAGAAGAGCTGTCAAGAAGAGGGTACACTCACCTTCTCATTCAAATGGGCCGTGGCTCCTATATTCCCTCAAAGTCTGAAGAAGGAGATGATGACTCCATTGCGGTAGATTACTTCACTTTTTCATCAAGCATTGCAGAGTATCTGAGAGCAGCATCTCTTGTCATTAGTCATGCAGGTTCAGGGAGCATATTTGAGACATTGCAGCTTAGGAAGCCCTTAATAGTCGTGGTTAATGAAGATTTGATGGACAACCATCAAAGTGAGTTGGCAGAAGAACTAACAGACAGGAAGCATCTGTACTATGCTCACCCACAGACACTTTGTCGCATTATAGCAGATATGGAAGTGGAGTCCCTCATTCCATACCATCCAGGTGATGCCACCCCAGTTGCCAAGCATATCAATAGGCTTATCTCAAATGGGCCTCCGCTGCCTCCTCCTTCTGGAGAGCCTCCTCTGATTCAACTGCTGCAAAACCCTCCCTCTCCATCTCCGTCGTCGCTGAACCAGGCAGAGCTCGCTAAGTTTGCCACCATTTCTGGAACCTGGTGGGATTTGGAAGGACCATTCAAAGCGTTGCATGCAATGAATCCTACAAGGCTTGCCTTCATTCGCTCAACGCTGTGCCGTCATTTCAGGAGGGACCCGTTATCTGCTAGACCCTTTGAAGGGCTCAGATTTATTGATGTTGGCTGTGGAGGTGGGATTCTTTCTGAGCCTTTAGCTCGGATGGGAGCTATTGTAACAGGAGTTGATGCTGTTGAGAAAAACATCAAGATAGCTCGCCTTCACGCAGTTTGTGTTTTTCCATTACACGCAGAAAAGCTAGTCGAGAAGCAAAAGAGTTTTGATGCTGTGTTTGCTTTAGAGGTGATTGAGCACGTGGAAAATCATGCTGATTTATGTAAATCTCTGTCAGCCTTAACTGTTCCCAGTGGAGCTACCATGATTTCAACGATTAACCGTTCTATGAGAGCATATGCCACTGCCATAATTGCAGCCGAGTACCTGCTCCACTGGCTTCCTAAAGGTACACATCAATGGTCAAATTTTCTTACTCCTGAAGAACTAGTCCTGATCCTGGAGCGTGCTTCTATTGCAGTCCAAGAGATGGCTGGGTTTGCATACAACCCTTTGACAGGAAGATGGTCAATATCTGATGATGTTACTGTAAATTTCATCGCTTATGAGCATGAGATGAATTGCTCAGCAGCTGCTTGGCATCTGGCGTCAAGTGGCGTGGATGTTTACACTGCCCTTGCTGGAGCTGTTGGAACTCTATATGGTCCGCTTCATGGCGGAGCAAATGAGCCTGTGTTTAAGATGCCAACTGAAATCGAATCTGTTGAGAACATTCCAGAGTTCATTAAGGGTGTGAAGAGCAGGAAGCAAAAGATGTCAGGTTTTGGCCATCGCATGTACAAGAACTATGATCCTAGAGCAAAGGTAGCTGTTGCTTTGAAGAAAGCTCCATATCTGACGAGTATTTTGTTAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004395 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0006732 GO:0006733 GO:0006743 GO:0006744 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009058 GO:0009108 GO:0009987 GO:0010420 GO:0016740 GO:0016741 GO:0031967 GO:0031975 GO:0032259 GO:0042180 GO:0042181 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051186 GO:0051188 GO:0071704 GO:1901576 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_23

Protein Analysis

535

Amino Acids

58.82

Weight (kDa)

6.18

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_tran_28_C	PF04101	13 - 166	1.4e-31	Glycosyltransferase family 28 C-terminal domain
Methyltransf_23	PF13489	249 - 400	4.6e-19	Methyltransferase domain
Methyltransf_31	PF13847	259 - 384	3.4e-09	Methyltransferase domain
Methyltransf_11	PF08241	264 - 351	7.5e-14	Methyltransferase domain
Methyltransf_25	PF13649	264 - 349	1.4e-10	Methyltransferase domain
Methyltransf_12	PF08242	264 - 349	2.1e-08	Methyltransferase domain
Citrate_synt	PF00285	430 - 520	1.5e-32	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30920 AT2G30920
fragaria_vesca	FvH4_6g37760
malus_domestica	MD09G1156300.v1.1 MD17G1142800.v1.1
prunus_persica	Prupe.3G169300_v2.0.a1
pyrus_communis	pycom17g13580
rosa_chinensis	RchiOBHm_Chr2g0150821 RchiOBHm_Chr4g0446711 RchiOBHm_Chr7g0218911
rosa_laevigata	RLG00000002318 RLG00000002325 RLG00000002354 RLG00000005638 RLG00000020509
rosa_multiflora	Rmu_sc0001753.1_g000039 Rmu_sc0003823.1_g000004
rosa_roxburghii	Rroxscaffold_3G00240410
rosa_rugosa	Rorug02G0422600 Rorug04G0373900 Rorug07G0179700
rosa_samantha	Rh2AG482800 Rh2BG495400 Rh2CG469100 Rh2DG506200 Rh3BG339500 Rh4AG435400 Rh4BG444300 Rh4CG461600 Rh4DG443200 Rh7AG322900 Rh7BG314000 Rh7CG339700 Rh7DG320100
rosa_wichuraiana	Rw2G039570 Rw4G037220 Rw7G027360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	272, 1125
AccB7I	CCANNNNNTGG	1 cut(s)	1219
AciI	CCGC	5 cut(s)	86, 209, 536, 1397, 1407
AclWI	GGATC	2 cut(s)	1180, 1535
AcoI	YGGCCR	1 cut(s)	1516
AcsI	RAATTY	2 cut(s)	1156, 1282
AcuI	CTGAAG	2 cut(s)	204, 1191
AcvI	CACGTG	1 cut(s)	991
AcyI	GRCGYC	1 cut(s)	1337
AfaI	GTAC	6 cut(s)	19, 131, 407, 1115, 1141, 1529
AfiI	CCNNNNNNNGG	7 cut(s)	551, 776, 777, 1189, 1219, 1247, 1403
AgsI	TTSAA	6 cut(s)	149, 572, 679, 776, 1062, 1570
AhdI	GACNNNNNGTC	1 cut(s)	429
AhlI	ACTAGT	2 cut(s)	62, 1177
AjnI	CCWGG	4 cut(s)	478, 615, 653, 1188
Alw21I	GWGCWC	2 cut(s)	627, 990
Alw26I	GTCTC	1 cut(s)	296
AlwI	GGATC	2 cut(s)	1180, 1535
AlwNI	CAGNNNCTG	1 cut(s)	1322
AoxI	GGCC	3 cut(s)	154, 530, 1516
ApeKI	GCWGC	7 cut(s)	257, 310, 538, 577, 1106, 1319, 1322
ApoI	RAATTY	2 cut(s)	1156, 1282
ArsI	GACNNNNNNTTYG	1 cut(s)	1579
AspS9I	GGNCC	5 cut(s)	154, 530, 671, 751, 1394
AsuHPI	GGTGA	4 cut(s)	128, 407, 494, 991
AvaII	GGWCC	3 cut(s)	671, 751, 1394
BalI	TGGCCA	1 cut(s)	1518
BanII	GRGCYC	2 cut(s)	627, 783
BarI	GAAGNNNNNNTAC	2 cut(s)	389, 421
BbrPI	CACGTG	1 cut(s)	991
BbsI	GAAGAC	1 cut(s)	41
Bbv12I	GWGCWC	2 cut(s)	627, 990
BbvI	GCAGC	7 cut(s)	269, 322, 525, 564, 1118, 1309, 1331
BccI	CCATC	8 cut(s)	346, 369, 483, 604, 832, 1213, 1248, 1527
BceAI	ACGGC	2 cut(s)	141, 720
BciT130I	CCWGG	4 cut(s)	480, 617, 655, 1190
BciVI	GTATCC	1 cut(s)	85
BcoDI	GTCTC	1 cut(s)	296
BcuI	ACTAGT	2 cut(s)	62, 1177
BfaI	CTAG	6 cut(s)	63, 77, 765, 935, 1178, 1545
BfuAI	ACCTGC	2 cut(s)	272, 1125
BfuI	GTATCC	1 cut(s)	85
BisI	GCNGC	7 cut(s)	258, 311, 539, 578, 1107, 1320, 1323
BlpI	GCTNAGC	1 cut(s)	1315
BlsI	GCNGC	7 cut(s)	259, 312, 540, 579, 1108, 1321, 1324
Bme1390I	CCNGG	4 cut(s)	480, 617, 655, 1190
Bme18I	GGWCC	3 cut(s)	671, 751, 1394
BmeRI	GACNNNNNGTC	1 cut(s)	429
BmgT120I	GGNCC	5 cut(s)	154, 530, 671, 751, 1394
BmiI	GGNNCC	4 cut(s)	163, 652, 752, 753
BmrFI	CCNGG	4 cut(s)	480, 617, 655, 1190
BmrI	ACTGGG	2 cut(s)	488, 1035
BmsI	GCATC	8 cut(s)	61, 269, 409, 475, 853, 949, 1339, 1422
BmuI	ACTGGG	2 cut(s)	488, 1035
BpiI	GAAGAC	1 cut(s)	41
BpmI	CTGGAG	3 cut(s)	573, 1211, 1392
Bpu10I	CCTNAGC	1 cut(s)	314
Bpu1102I	GCTNAGC	1 cut(s)	1315
BsaAI	YACGTR	1 cut(s)	991
BsaHI	GRCGYC	1 cut(s)	1337
BsaJI	CCNNGG	1 cut(s)	157
BsaXI	ACNNNNNCTCC	2 cut(s)	834, 864
Bsc4I	CCNNNNNNNGG	7 cut(s)	551, 776, 777, 1189, 1219, 1247, 1403
Bse1I	ACTGG	3 cut(s)	494, 1041, 1130
Bse3DI	GCAATG	4 cut(s)	204, 237, 305, 699
BseBI	CCWGG	4 cut(s)	480, 617, 655, 1190
BseDI	CCNNGG	1 cut(s)	157
BseGI	GGATG	3 cut(s)	475, 843, 1357
BseLI	CCNNNNNNNGG	7 cut(s)	551, 776, 777, 1189, 1219, 1247, 1403
BseMI	GCAATG	4 cut(s)	204, 237, 305, 699
BseMII	CTCAG	4 cut(s)	242, 796, 813, 1329
BseNI	ACTGG	3 cut(s)	494, 1041, 1130
BseRI	GAGGAG	2 cut(s)	534, 552
BseXI	GCAGC	7 cut(s)	269, 322, 525, 564, 1118, 1309, 1331
BseYI	CCCAGC	1 cut(s)	1223
BshFI	GGCC	3 cut(s)	156, 532, 1518
BsiHKAI	GWGCWC	2 cut(s)	627, 990
BslFI	GGGAC	2 cut(s)	445, 764
BslI	CCNNNNNNNGG	7 cut(s)	551, 776, 777, 1189, 1219, 1247, 1403
BsmAI	GTCTC	1 cut(s)	296
BsmFI	GGGAC	2 cut(s)	445, 764
BsnI	GGCC	3 cut(s)	156, 532, 1518
Bsp1286I	GDGCHC	3 cut(s)	627, 783, 990
Bsp1407I	TGTACA	1 cut(s)	1527
Bsp143I	GATC	2 cut(s)	1185, 1540
Bsp1720I	GCTNAGC	1 cut(s)	1315
BspACI	CCGC	5 cut(s)	86, 209, 536, 1397, 1407
BspANI	GGCC	3 cut(s)	156, 532, 1518
BspCNI	CTCAG	5 cut(s)	4, 243, 795, 814, 1328
BspLI	GGNNCC	4 cut(s)	163, 652, 752, 753
BspMI	ACCTGC	2 cut(s)	272, 1125
BspPI	GGATC	2 cut(s)	1180, 1535
BspQI	GCTCTTC	2 cut(s)	105, 1481
BsrDI	GCAATG	4 cut(s)	204, 237, 305, 699
BsrGI	TGTACA	1 cut(s)	1527
BsrI	ACTGG	3 cut(s)	494, 1041, 1130
BssECI	CCNNGG	1 cut(s)	157
BssMI	GATC	2 cut(s)	1185, 1540
BssNI	GRCGYC	1 cut(s)	1337
Bst2UI	CCWGG	4 cut(s)	480, 617, 655, 1190
Bst4CI	ACNGT	5 cut(s)	40, 52, 1036, 1073, 1279
Bst6I	CTCTTC	4 cut(s)	93, 105, 118, 1481
BstACI	GRCGYC	1 cut(s)	1337
BstAUI	TGTACA	1 cut(s)	1527
BstBAI	YACGTR	1 cut(s)	991
BstC8I	GCNNGC	5 cut(s)	627, 690, 711, 892, 1197
BstDEI	CTNAG	7 cut(s)	12, 251, 314, 630, 782, 822, 1315
BstDSI	CCRYGG	1 cut(s)	157
BstENI	CCTNNNNNAGG	1 cut(s)	1245
BstF5I	GGATG	3 cut(s)	475, 843, 1357
BstKTI	GATC	2 cut(s)	1188, 1543
BstMAI	GTCTC	1 cut(s)	296
BstMBI	GATC	2 cut(s)	1185, 1540
BstNI	CCWGG	4 cut(s)	480, 617, 655, 1190
BstNSI	RCATGY	2 cut(s)	692, 1528
BstSCI	CCNGG	4 cut(s)	478, 615, 653, 1188
BstV1I	GCAGC	7 cut(s)	269, 322, 525, 564, 1118, 1309, 1331
BstV2I	GAAGAC	1 cut(s)	41
BsuI	GTATCC	1 cut(s)	85
BsuRI	GGCC	3 cut(s)	156, 532, 1518
BtgI	CCRYGG	1 cut(s)	157
BtgZI	GCGATG	2 cut(s)	1273, 1505
BtsCI	GGATG	3 cut(s)	475, 843, 1357
BtsI	GCAGTG	2 cut(s)	1092, 1359
BtsIMutI	CAGTG	4 cut(s)	1048, 1092, 1123, 1359
BveI	ACCTGC	2 cut(s)	272, 1125
Cac8I	GCNNGC	5 cut(s)	627, 690, 711, 892, 1197
CaiI	CAGNNNCTG	1 cut(s)	1322
Cfr13I	GGNCC	5 cut(s)	154, 530, 671, 751, 1394
CseI	GACGC	1 cut(s)	1326
CsiI	ACCWGGT	1 cut(s)	653
Csp6I	GTAC	6 cut(s)	18, 130, 406, 1114, 1140, 1528
CspCI	CAANNNNNGTGG	4 cut(s)	478, 513, 1329, 1364
CviAII	CATG	7 cut(s)	278, 689, 1001, 1054, 1301, 1403, 1525
CviQI	GTAC	6 cut(s)	18, 130, 406, 1114, 1140, 1528
DdeI	CTNAG	7 cut(s)	12, 251, 314, 630, 782, 822, 1315
DpnI	GATC	2 cut(s)	1187, 1542
DpnII	GATC	2 cut(s)	1185, 1540
DriI	GACNNNNNGTC	1 cut(s)	429
EaeI	YGGCCR	1 cut(s)	1516
Eam1104I	CTCTTC	4 cut(s)	93, 105, 118, 1481
Eam1105I	GACNNNNNGTC	1 cut(s)	429
EarI	CTCTTC	4 cut(s)	93, 105, 118, 1481
EciI	GGCGGA	1 cut(s)	1422
Ecl136II	GAGCTC	1 cut(s)	625
Eco24I	GRGCYC	2 cut(s)	627, 783
Eco47I	GGWCC	3 cut(s)	671, 751, 1394
Eco53kI	GAGCTC	1 cut(s)	625
Eco57I	CTGAAG	2 cut(s)	204, 1191
Eco72I	CACGTG	1 cut(s)	991
EcoICRI	GAGCTC	1 cut(s)	625
EcoNI	CCTNNNNNAGG	1 cut(s)	1245
EcoO109I	RGGNCCY	1 cut(s)	751
EcoRII	CCWGG	4 cut(s)	478, 615, 653, 1188
EcoT38I	GRGCYC	2 cut(s)	627, 783
FaeI	CATG	7 cut(s)	281, 692, 1004, 1057, 1304, 1406, 1528
FaqI	GGGAC	2 cut(s)	445, 764
FatI	CATG	7 cut(s)	277, 688, 1000, 1053, 1300, 1402, 1524
FauNDI	CATATG	1 cut(s)	1087
Fnu4HI	GCNGC	7 cut(s)	258, 311, 539, 578, 1107, 1320, 1323
FokI	GGATG	3 cut(s)	462, 850, 1364
FriOI	GRGCYC	2 cut(s)	627, 783
Fsp4HI	GCNGC	7 cut(s)	258, 311, 539, 578, 1107, 1320, 1323
FspBI	CTAG	6 cut(s)	63, 77, 765, 935, 1178, 1545
GluI	GCNGC	7 cut(s)	258, 311, 539, 578, 1107, 1320, 1323
GsaI	CCCAGC	1 cut(s)	1227
GsuI	CTGGAG	3 cut(s)	573, 1211, 1392
HaeIII	GGCC	3 cut(s)	156, 532, 1518
HgaI	GACGC	1 cut(s)	1326
Hin1I	GRCGYC	1 cut(s)	1337
Hin1II	CATG	7 cut(s)	281, 692, 1004, 1057, 1304, 1406, 1528
HinfI	GANTC	6 cut(s)	200, 458, 568, 697, 814, 1448
HphI	GGTGA	4 cut(s)	128, 407, 494, 991
Hpy166II	GTNNAC	3 cut(s)	132, 1142, 1357
Hpy188I	TCNGA	8 cut(s)	184, 252, 567, 785, 823, 837, 1267, 1587
Hpy188III	TCNNGA	9 cut(s)	120, 552, 648, 745, 883, 940, 1169, 1183, 1466
Hpy8I	GTNNAC	3 cut(s)	132, 1142, 1357
Hpy99I	CGWCG	2 cut(s)	607, 610
HpyAV	CCTTC	7 cut(s)	149, 182, 558, 662, 724, 770, 905
HpyCH4III	ACNGT	5 cut(s)	40, 52, 1036, 1073, 1279
HpyCH4IV	ACGT	1 cut(s)	990
HpyCH4V	TGCA	9 cut(s)	242, 281, 310, 580, 688, 692, 1106, 1208, 1232
HpyF3I	CTNAG	7 cut(s)	12, 251, 314, 630, 782, 822, 1315
HpySE526I	ACGT	1 cut(s)	990
Hsp92I	GRCGYC	1 cut(s)	1337
Hsp92II	CATG	7 cut(s)	281, 692, 1004, 1057, 1304, 1406, 1528
KflI	GGGWCCC	1 cut(s)	751
Kzo9I	GATC	2 cut(s)	1185, 1540
LguI	GCTCTTC	2 cut(s)	105, 1481
LmnI	GCTCC	9 cut(s)	167, 291, 842, 1046, 1125, 1192, 1373, 1409, 1582
Lsp1109I	GCAGC	7 cut(s)	269, 322, 525, 564, 1118, 1309, 1331
LweI	GCATC	8 cut(s)	61, 269, 409, 475, 853, 949, 1339, 1422
MabI	ACCWGGT	1 cut(s)	653
MaeI	CTAG	6 cut(s)	63, 77, 765, 935, 1178, 1545
MaeII	ACGT	1 cut(s)	990
MaeIII	GTNAC	3 cut(s)	46, 850, 1273
MalI	GATC	2 cut(s)	1187, 1542
MboI	GATC	2 cut(s)	1185, 1540
MhlI	GDGCHC	3 cut(s)	627, 783, 990
MlsI	TGGCCA	1 cut(s)	1518
MluCI	AATT	4 cut(s)	1101, 1156, 1282, 1309
MluNI	TGGCCA	1 cut(s)	1518
MlyI	GAGTC	2 cut(s)	194, 467
MmeI	TCCRAC	2 cut(s)	34, 1360
Mox20I	TGGCCA	1 cut(s)	1518
MscI	TGGCCA	1 cut(s)	1518
MseI	TTAA	8 cut(s)	105, 326, 339, 1031, 1068, 1428, 1476, 1601
MslI	CAYNNNNRTG	4 cut(s)	149, 366, 480, 1147
Msp20I	TGGCCA	1 cut(s)	1518
MspA1I	CMGCKG	2 cut(s)	538, 1322
MspR9I	CCNGG	4 cut(s)	480, 617, 655, 1190
MvaI	CCWGG	4 cut(s)	480, 617, 655, 1190
NdeI	CATATG	1 cut(s)	1087
NdeII	GATC	2 cut(s)	1185, 1540
NlaIII	CATG	7 cut(s)	281, 692, 1004, 1057, 1304, 1406, 1528
NlaIV	GGNNCC	4 cut(s)	163, 652, 752, 753
NmeAIII	GCCGAG	1 cut(s)	1135
NmuCI	GTSAC	1 cut(s)	46
NspI	RCATGY	2 cut(s)	692, 1528
PaeI	GCATGC	1 cut(s)	692
PciSI	GCTCTTC	2 cut(s)	105, 1481
PfeI	GAWTC	4 cut(s)	568, 697, 814, 1448
PflMI	CCANNNNNTGG	1 cut(s)	1219
PfoI	TCCNGGA	1 cut(s)	1188
PkrI	GCNGC	7 cut(s)	259, 312, 540, 579, 1108, 1321, 1324
PleI	GAGTC	2 cut(s)	194, 466
PmaCI	CACGTG	1 cut(s)	991
PmlI	CACGTG	1 cut(s)	991
PpsI	GAGTC	2 cut(s)	194, 466
Ppu21I	YACGTR	1 cut(s)	991
PpuMI	RGGWCCY	1 cut(s)	751
Psp124BI	GAGCTC	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	751
Psp6I	CCWGG	4 cut(s)	478, 615, 653, 1188
PspCI	CACGTG	1 cut(s)	991
PspFI	CCCAGC	1 cut(s)	1223
PspGI	CCWGG	4 cut(s)	478, 615, 653, 1188
PspN4I	GGNNCC	4 cut(s)	163, 652, 752, 753
PspPI	GGNCC	5 cut(s)	154, 530, 671, 751, 1394
PspPPI	RGGWCCY	1 cut(s)	751
PstNI	CAGNNNCTG	1 cut(s)	1322
PvuII	CAGCTG	1 cut(s)	1322
RsaI	GTAC	6 cut(s)	19, 131, 407, 1115, 1141, 1529
RsaNI	GTAC	6 cut(s)	18, 130, 406, 1114, 1140, 1528
RseI	CAYNNNNRTG	4 cut(s)	149, 366, 480, 1147
SacI	GAGCTC	1 cut(s)	627
SapI	GCTCTTC	2 cut(s)	105, 1481
SaqAI	TTAA	8 cut(s)	105, 326, 339, 1031, 1068, 1428, 1476, 1601
SatI	GCNGC	7 cut(s)	258, 311, 539, 578, 1107, 1320, 1323
Sau3AI	GATC	2 cut(s)	1185, 1540
Sau96I	GGNCC	5 cut(s)	154, 530, 671, 751, 1394
SchI	GAGTC	2 cut(s)	194, 467
ScrFI	CCNGG	4 cut(s)	480, 617, 655, 1190
SduI	GDGCHC	3 cut(s)	627, 783, 990
SexAI	ACCWGGT	1 cut(s)	653
SfaNI	GCATC	8 cut(s)	61, 269, 409, 475, 853, 949, 1339, 1422
SinI	GGWCC	3 cut(s)	671, 751, 1394
SmiMI	CAYNNNNRTG	4 cut(s)	149, 366, 480, 1147
SpeI	ACTAGT	2 cut(s)	62, 1177
SphI	GCATGC	1 cut(s)	692
Sse9I	AATT	4 cut(s)	1101, 1156, 1282, 1309
SsiI	CCGC	5 cut(s)	86, 209, 536, 1397, 1407
SspMI	CTAG	6 cut(s)	63, 77, 765, 935, 1178, 1545
SstI	GAGCTC	1 cut(s)	627
StyD4I	CCNGG	4 cut(s)	478, 615, 653, 1188
TaaI	ACNGT	5 cut(s)	40, 52, 1036, 1073, 1279
TaiI	ACGT	1 cut(s)	993
TaqI	TCGA	2 cut(s)	939, 1446
TasI	AATT	4 cut(s)	1101, 1156, 1282, 1309
TatI	WGTACW	2 cut(s)	405, 1527
TfiI	GAWTC	4 cut(s)	568, 697, 814, 1448
Tru1I	TTAA	8 cut(s)	105, 326, 339, 1031, 1068, 1428, 1476, 1601
Tru9I	TTAA	8 cut(s)	105, 326, 339, 1031, 1068, 1428, 1476, 1601
TscAI	CASTG	4 cut(s)	1048, 1099, 1130, 1366
TseFI	GTSAC	1 cut(s)	46
TseI	GCWGC	7 cut(s)	257, 310, 538, 577, 1106, 1319, 1322
Tsp45I	GTSAC	1 cut(s)	46
TspDTI	ATGAA	8 cut(s)	219, 357, 706, 710, 1276, 1322, 1391, 1462
TspGWI	ACGGA	1 cut(s)	591
TspRI	CASTG	4 cut(s)	1048, 1099, 1130, 1366
Van91I	CCANNNNNTGG	1 cut(s)	1219
VpaK11BI	GGWCC	3 cut(s)	671, 751, 1394
XagI	CCTNNNNNAGG	1 cut(s)	1245
XapI	RAATTY	2 cut(s)	1156, 1282
XceI	RCATGY	2 cut(s)	692, 1528
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1220
XspI	CTAG	6 cut(s)	63, 77, 765, 935, 1178, 1545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.