SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10950 AT3G60245 |
| fragaria_vesca | FvH4_5g20720 FvH4_5g33510 FvH4_7g09070 |
| malus_domestica | MD02G1221600.v1.1 MD04G1053900.v1.1 MD06G1044600.v1.1 MD07G1094700.v1.1 MD13G1011900.v1.1 |
| prunus_persica | Prupe.2G119100_v2.0.a1 Prupe.5G052800_v2.0.a1 |
| pyrus_communis | pycom04g04700 pycom06g03790 pycom07g07800 |
| rosa_chinensis | RchiOBHm_Chr1g0344921 RchiOBHm_Chr3g0477031 RchiOBHm_Chr7g0206491 |
| rosa_laevigata | RLG00000003309 RLG00000003310 |
| rosa_multiflora | Rmu_co8322135.1_g000001 Rmu_sc0000390.1_g000003 Rmu_sc0005065.1_g000043 Rmu_sc0037016.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00251480 Rroxscaffold_4G00309520 |
| rosa_rugosa | Rorug01G0175000 Rorug07G0097900 |
| rosa_samantha | Rh1AG193000 Rh1BG159300 Rh1CG178100 Rh1DG190100 Rh3BG241600 Rh7AG229500 Rh7BG226100 Rh7CG244300 Rh7DG236500 |
| rosa_wichuraiana | Rw1G015880 Rw7G019750 Rw7G019760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 146 |
| AcuI | CTGAAG | 2 cut(s) | 27, 297 |
| AgsI | TTSAA | 2 cut(s) | 41, 128 |
| AluBI | AGCT | 2 cut(s) | 218, 281 |
| AluI | AGCT | 2 cut(s) | 218, 281 |
| ApoI | RAATTY | 1 cut(s) | 146 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 12 |
| AsuC2I | CCSGG | 1 cut(s) | 63 |
| BbsI | GAAGAC | 1 cut(s) | 246 |
| BcnI | CCSGG | 1 cut(s) | 63 |
| BfaI | CTAG | 1 cut(s) | 219 |
| Bme1390I | CCNGG | 1 cut(s) | 63 |
| BmrFI | CCNGG | 1 cut(s) | 63 |
| BmrI | ACTGGG | 1 cut(s) | 256 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BmuI | ACTGGG | 1 cut(s) | 256 |
| BpiI | GAAGAC | 1 cut(s) | 246 |
| BpuMI | CCSGG | 1 cut(s) | 63 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 161, 191 |
| Bse1I | ACTGG | 1 cut(s) | 251 |
| BseGI | GGATG | 1 cut(s) | 271 |
| BseMII | CTCAG | 1 cut(s) | 92 |
| BseNI | ACTGG | 1 cut(s) | 251 |
| BsiSI | CCGG | 1 cut(s) | 63 |
| Bsp143I | GATC | 1 cut(s) | 171 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BsrI | ACTGG | 1 cut(s) | 251 |
| BssMI | GATC | 1 cut(s) | 171 |
| Bst4CI | ACNGT | 2 cut(s) | 138, 302 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 288 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 78 |
| BstF5I | GGATG | 1 cut(s) | 271 |
| BstKTI | GATC | 1 cut(s) | 174 |
| BstMBI | GATC | 1 cut(s) | 171 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 150 |
| BstSCI | CCNGG | 1 cut(s) | 61 |
| BstV2I | GAAGAC | 1 cut(s) | 246 |
| BtsCI | GGATG | 1 cut(s) | 271 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| CviJI | RGCY | 3 cut(s) | 218, 251, 281 |
| CviKI_1 | RGCY | 3 cut(s) | 218, 251, 281 |
| DdeI | CTNAG | 1 cut(s) | 78 |
| DpnI | GATC | 1 cut(s) | 173 |
| DpnII | GATC | 1 cut(s) | 171 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 288 |
| EarI | CTCTTC | 2 cut(s) | 218, 288 |
| Eco57I | CTGAAG | 2 cut(s) | 27, 297 |
| FaiI | YATR | 7 cut(s) | 84, 86, 116, 159, 180, 210, 290 |
| FauNDI | CATATG | 1 cut(s) | 84 |
| FokI | GGATG | 1 cut(s) | 278 |
| FspBI | CTAG | 1 cut(s) | 219 |
| HapII | CCGG | 1 cut(s) | 63 |
| HinfI | GANTC | 4 cut(s) | 13, 26, 50, 272 |
| HpaII | CCGG | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 277 |
| Hpy188III | TCNNGA | 2 cut(s) | 167, 263 |
| HpyCH4III | ACNGT | 2 cut(s) | 138, 302 |
| HpyCH4V | TGCA | 2 cut(s) | 144, 163 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 150 |
| HpyF3I | CTNAG | 1 cut(s) | 78 |
| Kzo9I | GATC | 1 cut(s) | 171 |
| LmnI | GCTCC | 1 cut(s) | 202 |
| LpnPI | CCDG | 5 cut(s) | 76, 152, 201, 232, 248 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 1 cut(s) | 219 |
| MaeIII | GTNAC | 1 cut(s) | 73 |
| MalI | GATC | 1 cut(s) | 173 |
| MboI | GATC | 1 cut(s) | 171 |
| MboII | GAAGA | 5 cut(s) | 235, 248, 251, 281, 305 |
| MluCI | AATT | 2 cut(s) | 129, 146 |
| MlyI | GAGTC | 1 cut(s) | 44 |
| MnlI | CCTC | 2 cut(s) | 69, 289 |
| MroXI | GAANNNNTTC | 1 cut(s) | 12 |
| MspI | CCGG | 1 cut(s) | 63 |
| MspR9I | CCNGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 150 |
| NciI | CCSGG | 1 cut(s) | 63 |
| NdeI | CATATG | 1 cut(s) | 84 |
| NdeII | GATC | 1 cut(s) | 171 |
| PdmI | GAANNNNTTC | 1 cut(s) | 12 |
| PfeI | GAWTC | 3 cut(s) | 13, 26, 272 |
| PleI | GAGTC | 1 cut(s) | 44 |
| PpsI | GAGTC | 1 cut(s) | 44 |
| Sau3AI | GATC | 1 cut(s) | 171 |
| SchI | GAGTC | 1 cut(s) | 44 |
| ScrFI | CCNGG | 1 cut(s) | 63 |
| SetI | ASST | 2 cut(s) | 220, 283 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| Sse9I | AATT | 2 cut(s) | 129, 146 |
| SspMI | CTAG | 1 cut(s) | 219 |
| StyD4I | CCNGG | 1 cut(s) | 61 |
| TaaI | ACNGT | 2 cut(s) | 138, 302 |
| TasI | AATT | 2 cut(s) | 129, 146 |
| TfiI | GAWTC | 3 cut(s) | 13, 26, 272 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TspDTI | ATGAA | 2 cut(s) | 249, 282 |
| TspRI | CASTG | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 146 |
| XmnI | GAANNNNTTC | 1 cut(s) | 12 |
| XspI | CTAG | 1 cut(s) | 219 |