60S ribosomal Protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10950 AT3G60245 |
| fragaria_vesca | FvH4_5g20720 FvH4_5g33510 FvH4_7g09070 |
| malus_domestica | MD02G1221600.v1.1 MD04G1053900.v1.1 MD06G1044600.v1.1 MD07G1094700.v1.1 MD13G1011900.v1.1 |
| prunus_persica | Prupe.2G119100_v2.0.a1 Prupe.5G052800_v2.0.a1 |
| pyrus_communis | pycom04g04700 pycom06g03790 pycom07g07800 |
| rosa_chinensis | RchiOBHm_Chr1g0344921 RchiOBHm_Chr3g0477031 RchiOBHm_Chr7g0206491 |
| rosa_laevigata | RLG00000003309 RLG00000003310 |
| rosa_multiflora | Rmu_co8322135.1_g000001 Rmu_sc0000390.1_g000003 Rmu_sc0005065.1_g000043 Rmu_sc0037016.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00251480 Rroxscaffold_4G00309520 |
| rosa_rugosa | Rorug01G0175000 Rorug07G0097900 |
| rosa_samantha | Rh1AG193000 Rh1BG159300 Rh1CG178100 Rh1DG190100 Rh3BG241600 Rh7AG229500 Rh7BG226100 Rh7CG244300 Rh7DG236500 |
| rosa_wichuraiana | Rw1G015880 Rw7G019750 Rw7G019760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 44 |
| AccB1I | GGYRCC | 3 cut(s) | 44, 56, 200 |
| AciI | CCGC | 1 cut(s) | 126 |
| AcsI | RAATTY | 1 cut(s) | 119 |
| AfaI | GTAC | 1 cut(s) | 46 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 252 |
| AgsI | TTSAA | 1 cut(s) | 214 |
| ApeKI | GCWGC | 2 cut(s) | 221, 224 |
| ApoI | RAATTY | 1 cut(s) | 119 |
| Asp718I | GGTACC | 1 cut(s) | 44 |
| BanI | GGYRCC | 3 cut(s) | 44, 56, 200 |
| BbvCI | CCTCAGC | 1 cut(s) | 257 |
| BbvI | GCAGC | 2 cut(s) | 208, 211 |
| BccI | CCATC | 2 cut(s) | 79, 254 |
| BisI | GCNGC | 3 cut(s) | 127, 222, 225 |
| BlsI | GCNGC | 3 cut(s) | 128, 223, 226 |
| BmiI | GGNNCC | 3 cut(s) | 46, 58, 202 |
| BmsI | GCATC | 2 cut(s) | 158, 168 |
| Bpu10I | CCTNAGC | 1 cut(s) | 257 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 252 |
| Bse1I | ACTGG | 1 cut(s) | 60 |
| BseGI | GGATG | 1 cut(s) | 173 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BseMII | CTCAG | 2 cut(s) | 248, 261 |
| BseNI | ACTGG | 1 cut(s) | 60 |
| BseXI | GCAGC | 2 cut(s) | 208, 211 |
| BshNI | GGYRCC | 3 cut(s) | 44, 56, 200 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BspACI | CCGC | 1 cut(s) | 126 |
| BspCNI | CTCAG | 2 cut(s) | 249, 262 |
| BspLI | GGNNCC | 3 cut(s) | 46, 58, 202 |
| BspT107I | GGYRCC | 3 cut(s) | 44, 56, 200 |
| BsrI | ACTGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 2 cut(s) | 179, 235 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstDEI | CTNAG | 3 cut(s) | 6, 257, 270 |
| BstF5I | GGATG | 1 cut(s) | 173 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 262 |
| BstV1I | GCAGC | 2 cut(s) | 208, 211 |
| BtsCI | GGATG | 1 cut(s) | 173 |
| BtsI | GCAGTG | 1 cut(s) | 216 |
| BtsIMutI | CAGTG | 1 cut(s) | 216 |
| Csp6I | GTAC | 1 cut(s) | 45 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 160, 195 |
| CviJI | RGCY | 4 cut(s) | 23, 152, 194, 256 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 152, 194, 256 |
| CviQI | GTAC | 1 cut(s) | 45 |
| DdeI | CTNAG | 3 cut(s) | 6, 257, 270 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| EcoRI | GAATTC | 1 cut(s) | 119 |
| FaiI | YATR | 4 cut(s) | 42, 54, 135, 207 |
| Fnu4HI | GCNGC | 3 cut(s) | 127, 222, 225 |
| FokI | GGATG | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 3 cut(s) | 127, 222, 225 |
| GluI | GCNGC | 3 cut(s) | 127, 222, 225 |
| HinfI | GANTC | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 1 cut(s) | 250 |
| HpyAV | CCTTC | 3 cut(s) | 13, 142, 184 |
| HpyCH4III | ACNGT | 2 cut(s) | 179, 235 |
| HpyCH4V | TGCA | 1 cut(s) | 171 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 262 |
| HpyF3I | CTNAG | 3 cut(s) | 6, 257, 270 |
| KpnI | GGTACC | 1 cut(s) | 48 |
| LmnI | GCTCC | 1 cut(s) | 262 |
| LpnPI | CCDG | 5 cut(s) | 9, 73, 148, 180, 235 |
| Lsp1109I | GCAGC | 2 cut(s) | 208, 211 |
| LweI | GCATC | 2 cut(s) | 158, 168 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MboII | GAAGA | 3 cut(s) | 28, 94, 154 |
| MluCI | AATT | 1 cut(s) | 119 |
| MnlI | CCTC | 3 cut(s) | 138, 246, 252 |
| MseI | TTAA | 2 cut(s) | 78, 277 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 262 |
| NlaIV | GGNNCC | 3 cut(s) | 46, 58, 202 |
| PfeI | GAWTC | 1 cut(s) | 27 |
| PkrI | GCNGC | 3 cut(s) | 128, 223, 226 |
| PspN4I | GGNNCC | 3 cut(s) | 46, 58, 202 |
| RsaI | GTAC | 1 cut(s) | 46 |
| RsaNI | GTAC | 1 cut(s) | 45 |
| SaqAI | TTAA | 2 cut(s) | 78, 277 |
| SatI | GCNGC | 3 cut(s) | 127, 222, 225 |
| SfaNI | GCATC | 2 cut(s) | 158, 168 |
| SgeI | CNNG | 9 cut(s) | 36, 60, 72, 118, 142, 175, 184, 207, 262 |
| Sse9I | AATT | 1 cut(s) | 119 |
| SsiI | CCGC | 1 cut(s) | 126 |
| TaaI | ACNGT | 2 cut(s) | 179, 235 |
| TasI | AATT | 1 cut(s) | 119 |
| TauI | GCSGC | 1 cut(s) | 129 |
| TfiI | GAWTC | 1 cut(s) | 27 |
| Tru1I | TTAA | 2 cut(s) | 78, 277 |
| Tru9I | TTAA | 2 cut(s) | 78, 277 |
| TscAI | CASTG | 1 cut(s) | 223 |
| TseI | GCWGC | 2 cut(s) | 221, 224 |
| TspRI | CASTG | 1 cut(s) | 223 |
| XapI | RAATTY | 1 cut(s) | 119 |