Rh7BG226100

Ribosomal L37ae protein family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002592
Physical Location & Seq
Reverse (-)
19459117 .. 19460881
1765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG226100.1

Sequence Viewer

Length: 276 bp
ATGCGGGTGTTTATGATTTTTTTTATCCCTGTTATATCAGGTACCCGTTATGGTGCCAGTCTGCGTAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAGTATTTCTGTGAATTCTGCGGCAAGTATGCTGTGAAGAGGAAGGCTGTTGGCATCTGGGGATGCAAGGACTGTGGCAAAGTGAAGGCTGGTGGTGCCTATACTTTGAACACTGCTGCAGCTGTTACAGTTAGAAGCACCATCAGGAGGCTGAGGGAGCAAACTGAGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ribosomal_L37ae

Protein Analysis

91

Amino Acids

10.26

Weight (kDa)

10.15

Isoelectric Point (pI)

33.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L37ae PF01780 14 - 87 6.2e-34 Ribosomal L37ae protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 41
AccB1I GGYRCC 3 cut(s) 41, 53, 197
AciI CCGC 2 cut(s) 4, 123
AcsI RAATTY 1 cut(s) 116
AfaI GTAC 1 cut(s) 43
AfiI CCNNNNNNNGG 1 cut(s) 249
AgsI TTSAA 1 cut(s) 211
AluBI AGCT 1 cut(s) 224
AluI AGCT 1 cut(s) 224
ApeKI GCWGC 2 cut(s) 218, 221
ApoI RAATTY 1 cut(s) 116
Asp718I GGTACC 1 cut(s) 41
BanI GGYRCC 3 cut(s) 41, 53, 197
BbvCI CCTCAGC 1 cut(s) 254
BbvI GCAGC 2 cut(s) 205, 233
BccI CCATC 2 cut(s) 76, 251
BfmI CTRYAG 1 cut(s) 219
BisI GCNGC 3 cut(s) 124, 219, 222
BlsI GCNGC 3 cut(s) 125, 220, 223
BmiI GGNNCC 3 cut(s) 43, 55, 199
BmsI GCATC 2 cut(s) 155, 165
Bpu10I CCTNAGC 1 cut(s) 254
Bsc4I CCNNNNNNNGG 1 cut(s) 249
Bse1I ACTGG 1 cut(s) 57
BseGI GGATG 1 cut(s) 170
BseLI CCNNNNNNNGG 1 cut(s) 249
BseMII CTCAG 2 cut(s) 245, 258
BseNI ACTGG 1 cut(s) 57
BseXI GCAGC 2 cut(s) 205, 233
BshNI GGYRCC 3 cut(s) 41, 53, 197
BslI CCNNNNNNNGG 1 cut(s) 249
BspACI CCGC 2 cut(s) 4, 123
BspCNI CTCAG 2 cut(s) 246, 259
BspLI GGNNCC 3 cut(s) 43, 55, 199
BspMAI CTGCAG 1 cut(s) 223
BspT107I GGYRCC 3 cut(s) 41, 53, 197
BsrI ACTGG 1 cut(s) 57
Bst4CI ACNGT 2 cut(s) 176, 232
Bst6I CTCTTC 1 cut(s) 134
BstDEI CTNAG 2 cut(s) 254, 267
BstF5I GGATG 1 cut(s) 170
BstMWI GCNNNNNNNGC 2 cut(s) 197, 259
BstSFI CTRYAG 1 cut(s) 219
BstV1I GCAGC 2 cut(s) 205, 233
BtsCI GGATG 1 cut(s) 170
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 1 cut(s) 213
Csp6I GTAC 1 cut(s) 42
CspCI CAANNNNNGTGG 2 cut(s) 157, 192
CviJI RGCY 4 cut(s) 149, 191, 224, 253
CviKI_1 RGCY 4 cut(s) 149, 191, 224, 253
CviQI GTAC 1 cut(s) 42
DdeI CTNAG 2 cut(s) 254, 267
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
EcoRI GAATTC 1 cut(s) 116
FaiI YATR 5 cut(s) 14, 35, 51, 132, 204
Fnu4HI GCNGC 3 cut(s) 124, 219, 222
FokI GGATG 1 cut(s) 177
Fsp4HI GCNGC 3 cut(s) 124, 219, 222
GluI GCNGC 3 cut(s) 124, 219, 222
Hpy188III TCNNGA 1 cut(s) 247
HpyAV CCTTC 2 cut(s) 139, 181
HpyCH4III ACNGT 2 cut(s) 176, 232
HpyCH4V TGCA 2 cut(s) 168, 221
HpyF10VI GCNNNNNNNGC 2 cut(s) 197, 259
HpyF3I CTNAG 2 cut(s) 254, 267
KpnI GGTACC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 259
LpnPI CCDG 6 cut(s) 24, 42, 70, 145, 177, 232
Lsp1109I GCAGC 2 cut(s) 205, 233
LweI GCATC 2 cut(s) 155, 165
MaeIII GTNAC 1 cut(s) 226
MboII GAAGA 2 cut(s) 91, 151
MluCI AATT 1 cut(s) 116
MnlI CCTC 3 cut(s) 135, 243, 249
MseI TTAA 2 cut(s) 75, 274
MspA1I CMGCKG 1 cut(s) 224
MwoI GCNNNNNNNGC 2 cut(s) 197, 259
NlaIV GGNNCC 3 cut(s) 43, 55, 199
PkrI GCNGC 3 cut(s) 125, 220, 223
PspN4I GGNNCC 3 cut(s) 43, 55, 199
PstI CTGCAG 1 cut(s) 223
PvuII CAGCTG 1 cut(s) 224
RsaI GTAC 1 cut(s) 43
RsaNI GTAC 1 cut(s) 42
SaqAI TTAA 2 cut(s) 75, 274
SatI GCNGC 3 cut(s) 124, 219, 222
SetI ASST 2 cut(s) 43, 226
SfaNI GCATC 2 cut(s) 155, 165
SfcI CTRYAG 1 cut(s) 219
Sse9I AATT 1 cut(s) 116
SsiI CCGC 2 cut(s) 4, 123
TaaI ACNGT 2 cut(s) 176, 232
TasI AATT 1 cut(s) 116
TauI GCSGC 1 cut(s) 126
Tru1I TTAA 2 cut(s) 75, 274
Tru9I TTAA 2 cut(s) 75, 274
TscAI CASTG 1 cut(s) 220
TseI GCWGC 2 cut(s) 218, 221
TspRI CASTG 1 cut(s) 220
XapI RAATTY 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.