Rh7DG236500

Ribosomal L37ae protein family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0002592
Physical Location & Seq
Reverse (-)
23503507 .. 23505026
1520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG236500.1

Sequence Viewer

Length: 219 bp
ATGACTAAGAGAACGAAGAAGGCTGGAATCGTTGGGAAATATGGTACCCGTTATGGTGCCAGTCTGCGTAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAGTATTTCTGTGAATTCTGCGGCAAGTATGCTGTGAAGAGGAAGGCTGTTGGCATCTGGGGATGCAAGGACTGTGGCAAAGTGAAGGCTGGTGGTGCCTATACTTTGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
Ribosomal_L37ae

Protein Analysis

72

Amino Acids

8.03

Weight (kDa)

10.11

Isoelectric Point (pI)

13.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L37ae PF01780 4 - 71 3.2e-32 Ribosomal L37ae protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 44
AccB1I GGYRCC 3 cut(s) 44, 56, 200
AciI CCGC 1 cut(s) 126
AcsI RAATTY 1 cut(s) 119
AfaI GTAC 1 cut(s) 46
AgsI TTSAA 1 cut(s) 214
ApoI RAATTY 1 cut(s) 119
Asp718I GGTACC 1 cut(s) 44
BanI GGYRCC 3 cut(s) 44, 56, 200
BccI CCATC 1 cut(s) 79
BisI GCNGC 1 cut(s) 127
BlsI GCNGC 1 cut(s) 128
BmiI GGNNCC 3 cut(s) 46, 58, 202
BmsI GCATC 2 cut(s) 158, 168
Bse1I ACTGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 60
BshNI GGYRCC 3 cut(s) 44, 56, 200
BspACI CCGC 1 cut(s) 126
BspLI GGNNCC 3 cut(s) 46, 58, 202
BspT107I GGYRCC 3 cut(s) 44, 56, 200
BsrI ACTGG 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 179
Bst6I CTCTTC 1 cut(s) 137
BstDEI CTNAG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 173
BstMWI GCNNNNNNNGC 1 cut(s) 200
BtsCI GGATG 1 cut(s) 173
Csp6I GTAC 1 cut(s) 45
CspCI CAANNNNNGTGG 2 cut(s) 160, 195
CviJI RGCY 3 cut(s) 23, 152, 194
CviKI_1 RGCY 3 cut(s) 23, 152, 194
CviQI GTAC 1 cut(s) 45
DdeI CTNAG 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 137
EarI CTCTTC 1 cut(s) 137
EcoRI GAATTC 1 cut(s) 119
FaiI YATR 4 cut(s) 42, 54, 135, 207
Fnu4HI GCNGC 1 cut(s) 127
FokI GGATG 1 cut(s) 180
Fsp4HI GCNGC 1 cut(s) 127
GluI GCNGC 1 cut(s) 127
HinfI GANTC 1 cut(s) 27
HpyAV CCTTC 3 cut(s) 13, 142, 184
HpyCH4III ACNGT 1 cut(s) 179
HpyCH4V TGCA 1 cut(s) 171
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 1 cut(s) 6
KpnI GGTACC 1 cut(s) 48
LpnPI CCDG 4 cut(s) 9, 73, 148, 180
LweI GCATC 2 cut(s) 158, 168
MboII GAAGA 3 cut(s) 28, 94, 154
MluCI AATT 1 cut(s) 119
MnlI CCTC 1 cut(s) 138
MseI TTAA 1 cut(s) 78
MwoI GCNNNNNNNGC 1 cut(s) 200
NlaIV GGNNCC 3 cut(s) 46, 58, 202
PfeI GAWTC 1 cut(s) 27
PkrI GCNGC 1 cut(s) 128
PspN4I GGNNCC 3 cut(s) 46, 58, 202
RsaI GTAC 1 cut(s) 46
RsaNI GTAC 1 cut(s) 45
SaqAI TTAA 1 cut(s) 78
SatI GCNGC 1 cut(s) 127
SfaNI GCATC 2 cut(s) 158, 168
SgeI CNNG 8 cut(s) 36, 60, 72, 118, 142, 175, 184, 207
Sse9I AATT 1 cut(s) 119
SsiI CCGC 1 cut(s) 126
TaaI ACNGT 1 cut(s) 179
TasI AATT 1 cut(s) 119
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 1 cut(s) 27
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
XapI RAATTY 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.