RLG00000018721

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
34492621 .. 34494276
1656 bp
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UTR
Exon/CDS
Intron
RLM00000018721

Sequence Viewer

Length: 366 bp
ATGGGATTACCCTTTTGCCCTGAATCCCCATCTATAAAACGAACATCTTCAGCTGCTTTCCAGTTCGAGAAGCCTGTATCAAGATTACCATCTACTATTACGCGAAATCAGACTGGGTTTCTTAACTGTGGCAATAGCCTTTACCCGATAACAAGATCTCCATCACCTGAAACTTTATCACATCAGATTCCAGTGGGTTTGGACAAGAAACAGATTTTTGGTATTGCAGAGAAGGAGATGGACTACAGGGTCGAGTTGTCCAACAAGTTGAATCTGGTAATAGACATTGAGCATTTTGATGGTGAACCCATAAAGCGTTTCGTTATCTTGGTTCAGGATCACAACTTCTGGACCTTCACAGAGTGA

Protein Analysis

122

Amino Acids

13.78

Weight (kDa)

6.29

Isoelectric Point (pI)

57.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 248
AccII CGCG 1 cut(s) 103
AclWI GGATC 1 cut(s) 345
AcuI CTGAAG 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 363
AgsI TTSAA 1 cut(s) 271
AluBI AGCT 1 cut(s) 53
AluI AGCT 1 cut(s) 53
AlwI GGATC 1 cut(s) 345
ApeKI GCWGC 1 cut(s) 53
Asp700I GAANNNNTTC 1 cut(s) 46
AspS9I GGNCC 1 cut(s) 351
AsuHPI GGTGA 2 cut(s) 156, 314
AvaII GGWCC 1 cut(s) 351
BbvI GCAGC 1 cut(s) 40
BccI CCATC 5 cut(s) 37, 97, 169, 232, 293
BfmI CTRYAG 1 cut(s) 244
BglII AGATCT 1 cut(s) 155
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
Bme18I GGWCC 1 cut(s) 351
BmgT120I GGNCC 1 cut(s) 351
BmrI ACTGGG 1 cut(s) 123
BmuI ACTGGG 1 cut(s) 123
BsaBI GATNNNNATC 2 cut(s) 88, 160
BsaXI ACNNNNNCTCC 2 cut(s) 142, 172
Bse1I ACTGG 3 cut(s) 61, 118, 191
Bse8I GATNNNNATC 2 cut(s) 88, 160
BseJI GATNNNNATC 2 cut(s) 88, 160
BseNI ACTGG 3 cut(s) 61, 118, 191
BseXI GCAGC 1 cut(s) 40
Bsh1236I CGCG 1 cut(s) 103
Bsp143I GATC 2 cut(s) 155, 337
BspFNI CGCG 1 cut(s) 103
BspPI GGATC 1 cut(s) 345
BsrI ACTGG 3 cut(s) 61, 118, 191
BssMI GATC 2 cut(s) 155, 337
Bst4CI ACNGT 1 cut(s) 128
BstFNI CGCG 1 cut(s) 103
BstKTI GATC 2 cut(s) 158, 340
BstMBI GATC 2 cut(s) 155, 337
BstSFI CTRYAG 1 cut(s) 244
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 1 cut(s) 40
BstX2I RGATCY 1 cut(s) 155
BstYI RGATCY 1 cut(s) 155
BtsIMutI CAGTG 1 cut(s) 198
Cfr13I GGNCC 1 cut(s) 351
CviJI RGCY 3 cut(s) 53, 73, 138
CviKI_1 RGCY 3 cut(s) 53, 73, 138
DpnI GATC 2 cut(s) 157, 339
DpnII GATC 2 cut(s) 155, 337
DraIII CACNNNGTG 1 cut(s) 363
DrdI GACNNNNNNGTC 1 cut(s) 248
DseDI GACNNNNNNGTC 1 cut(s) 248
Eco47I GGWCC 1 cut(s) 351
Eco57I CTGAAG 1 cut(s) 33
FaiI YATR 2 cut(s) 35, 311
Fnu4HI GCNGC 1 cut(s) 54
Fsp4HI GCNGC 1 cut(s) 54
GluI GCNGC 1 cut(s) 54
HinfI GANTC 3 cut(s) 23, 187, 271
HphI GGTGA 2 cut(s) 156, 314
Hpy166II GTNNAC 1 cut(s) 305
Hpy188I TCNGA 2 cut(s) 111, 186
Hpy188III TCNNGA 4 cut(s) 67, 81, 335, 349
Hpy8I GTNNAC 1 cut(s) 305
HpyAV CCTTC 2 cut(s) 226, 364
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4V TGCA 1 cut(s) 227
Kzo9I GATC 2 cut(s) 155, 337
Lsp1109I GCAGC 1 cut(s) 40
MalI GATC 2 cut(s) 157, 339
MboI GATC 2 cut(s) 155, 337
MboII GAAGA 1 cut(s) 39
MflI RGATCY 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 285
MroXI GAANNNNTTC 1 cut(s) 46
MseI TTAA 1 cut(s) 123
MslI CAYNNNNRTG 1 cut(s) 297
MspA1I CMGCKG 1 cut(s) 53
MvnI CGCG 1 cut(s) 103
NdeII GATC 2 cut(s) 155, 337
PdmI GAANNNNTTC 1 cut(s) 46
PfeI GAWTC 3 cut(s) 23, 187, 271
PkrI GCNGC 1 cut(s) 55
PspPI GGNCC 1 cut(s) 351
PsuI RGATCY 1 cut(s) 155
PvuII CAGCTG 1 cut(s) 53
RseI CAYNNNNRTG 1 cut(s) 297
SaqAI TTAA 1 cut(s) 123
SatI GCNGC 1 cut(s) 54
Sau3AI GATC 2 cut(s) 155, 337
Sau96I GGNCC 1 cut(s) 351
SetI ASST 3 cut(s) 55, 169, 356
SfcI CTRYAG 1 cut(s) 244
SinI GGWCC 1 cut(s) 351
SmiMI CAYNNNNRTG 1 cut(s) 297
TaaI ACNGT 1 cut(s) 128
TaqI TCGA 2 cut(s) 66, 252
TfiI GAWTC 3 cut(s) 23, 187, 271
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TscAI CASTG 1 cut(s) 198
TseI GCWGC 1 cut(s) 53
TspRI CASTG 1 cut(s) 198
VpaK11BI GGWCC 1 cut(s) 351
XmnI GAANNNNTTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.