Rw2G027490

Mitochondrial import inner membrane translocase subunit

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
43175636 .. 43177504
1869 bp
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UTR
Exon/CDS
Intron
Rw2G027490.1

Sequence Viewer

Length: 225 bp
ATGGCTCTTCCTCTTTTGTTTCTTCTATCTAGTTGGATCACCTGTTATGGATGTAAACCAAACGGTCCAATGGCTGCTAACACTGTTCCAGTGGGTTTGGACAAGGAACTGATTTTTGGTATGGCAGAGGAGGAGATGGAGTACAGGGTTGAGTTGTTTAACAATAATGGGGTTTTTGCGAGGTCGTATTTGAATCCAATTTCTTTTCAATCTCAGCTCCAATAG

Protein Analysis

74

Amino Acids

8.32

Weight (kDa)

4.55

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 44
AfaI GTAC 1 cut(s) 143
AgsI TTSAA 2 cut(s) 193, 209
AjuI GAANNNNNNNTTGG 2 cut(s) 99, 131
AluBI AGCT 1 cut(s) 217
AluI AGCT 1 cut(s) 217
AlwI GGATC 1 cut(s) 44
ApeKI GCWGC 1 cut(s) 74
AspS9I GGNCC 1 cut(s) 65
AsuHPI GGTGA 1 cut(s) 31
AvaII GGWCC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 61
BccI CCATC 1 cut(s) 130
BfaI CTAG 1 cut(s) 30
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme18I GGWCC 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 65
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bse1I ACTGG 1 cut(s) 89
BseGI GGATG 1 cut(s) 56
BseNI ACTGG 1 cut(s) 89
BseRI GAGGAG 2 cut(s) 143, 146
BseXI GCAGC 1 cut(s) 61
Bsp143I GATC 1 cut(s) 36
BspPI GGATC 1 cut(s) 44
BspQI GCTCTTC 1 cut(s) 12
BsrI ACTGG 1 cut(s) 89
BssMI GATC 1 cut(s) 36
Bst4CI ACNGT 2 cut(s) 65, 85
Bst6I CTCTTC 1 cut(s) 12
BstDEI CTNAG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 56
BstKTI GATC 1 cut(s) 39
BstMBI GATC 1 cut(s) 36
BstV1I GCAGC 1 cut(s) 61
BtsCI GGATG 1 cut(s) 56
BtsIMutI CAGTG 2 cut(s) 81, 96
Cfr13I GGNCC 1 cut(s) 65
Csp6I GTAC 1 cut(s) 142
CviJI RGCY 3 cut(s) 5, 74, 217
CviKI_1 RGCY 3 cut(s) 5, 74, 217
CviQI GTAC 1 cut(s) 142
DdeI CTNAG 1 cut(s) 213
DpnI GATC 1 cut(s) 38
DpnII GATC 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 65
FaiI YATR 2 cut(s) 48, 122
Fnu4HI GCNGC 1 cut(s) 75
FokI GGATG 1 cut(s) 63
Fsp4HI GCNGC 1 cut(s) 75
FspBI CTAG 1 cut(s) 30
GluI GCNGC 1 cut(s) 75
HinfI GANTC 1 cut(s) 193
HphI GGTGA 1 cut(s) 31
Hpy166II GTNNAC 1 cut(s) 56
Hpy8I GTNNAC 1 cut(s) 56
HpyCH4III ACNGT 2 cut(s) 65, 85
HpyF3I CTNAG 1 cut(s) 213
Kzo9I GATC 1 cut(s) 36
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 1 cut(s) 222
LpnPI CCDG 3 cut(s) 55, 102, 130
Lsp1109I GCAGC 1 cut(s) 61
MaeI CTAG 1 cut(s) 30
MalI GATC 1 cut(s) 38
MboI GATC 1 cut(s) 36
MboII GAAGA 1 cut(s) 14
MluCI AATT 1 cut(s) 198
MmeI TCCRAC 1 cut(s) 14
MnlI CCTC 4 cut(s) 21, 121, 124, 174
MseI TTAA 1 cut(s) 159
NdeII GATC 1 cut(s) 36
PciSI GCTCTTC 1 cut(s) 12
PfeI GAWTC 1 cut(s) 193
PkrI GCNGC 1 cut(s) 76
PspPI GGNCC 1 cut(s) 65
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 1 cut(s) 75
Sau3AI GATC 1 cut(s) 36
Sau96I GGNCC 1 cut(s) 65
SetI ASST 3 cut(s) 44, 185, 219
SgeI CNNG 6 cut(s) 42, 54, 101, 115, 157, 192
SinI GGWCC 1 cut(s) 65
Sse9I AATT 1 cut(s) 198
SspMI CTAG 1 cut(s) 30
TaaI ACNGT 2 cut(s) 65, 85
TasI AATT 1 cut(s) 198
TatI WGTACW 1 cut(s) 141
TfiI GAWTC 1 cut(s) 193
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 2 cut(s) 88, 96
TseI GCWGC 1 cut(s) 74
TspRI CASTG 2 cut(s) 88, 96
VpaK11BI GGWCC 1 cut(s) 65
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.