Rmu_sc0000131.1_g000026

Sulfite oxidase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000131.1
Physical Location & Seq
Reverse (-)
118744 .. 119205
462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000131.1_g000026.1.cds

Sequence Viewer

Length: 369 bp
atgactcgccttcatcaaatgtgcgtgcagattgtagttcatggatatggagtgtctggaggcggtcgggcgattgagcgagtagatgtatctttcgatgaaggcaagacatgggaggaagcaatcagataccagaagagtactgaagtcccatacgttgctgatgatacaagtagtggtgacaagtgggcatgggtgctgtttaaggctgaagcagatctctctcacaatactgaaatcgtcaccaaagcagttgatatagctggaaatgtccaacccgaaaatgtgggtgtcatctggaacctgagaggaatacaaaacacgtcttggcacagggtccgtgttgaagtcgaggaccctaatttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.74

Weight (kDa)

5.11

Isoelectric Point (pI)

16.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 63
AcuI CTGAAG 2 cut(s) 165, 231
AfaI GTAC 1 cut(s) 142
AflIII ACRYGT 1 cut(s) 321
AgsI TTSAA 1 cut(s) 347
AjiI CACGTC 1 cut(s) 324
AluBI AGCT 1 cut(s) 263
AluI AGCT 1 cut(s) 263
AspS9I GGNCC 2 cut(s) 337, 355
AsuHPI GGTGA 2 cut(s) 191, 235
AvaII GGWCC 2 cut(s) 337, 355
BglII AGATCT 1 cut(s) 217
BmcAI AGTACT 1 cut(s) 142
Bme18I GGWCC 2 cut(s) 337, 355
BmgBI CACGTC 1 cut(s) 324
BmgT120I GGNCC 2 cut(s) 337, 355
BmiI GGNNCC 3 cut(s) 302, 338, 357
BpmI CTGGAG 1 cut(s) 78
BseMII CTCAG 1 cut(s) 296
BsgI GTGCAG 1 cut(s) 47
Bsh1285I CGRYCG 1 cut(s) 67
BsiEI CGRYCG 1 cut(s) 67
BslFI GGGAC 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 134
Bsp143I GATC 1 cut(s) 217
BspACI CCGC 1 cut(s) 63
BspCNI CTCAG 1 cut(s) 297
BspLI GGNNCC 3 cut(s) 302, 338, 357
BssMI GATC 1 cut(s) 217
Bst6I CTCTTC 1 cut(s) 131
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 1 cut(s) 305
BstKTI GATC 1 cut(s) 220
BstMBI GATC 1 cut(s) 217
BstMCI CGRYCG 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 217
BstYI RGATCY 1 cut(s) 217
BtrI CACGTC 1 cut(s) 324
Cac8I GCNNGC 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 337, 355
Csp6I GTAC 1 cut(s) 141
CviAII CATG 3 cut(s) 41, 111, 192
CviJI RGCY 2 cut(s) 209, 263
CviKI_1 RGCY 2 cut(s) 209, 263
CviQI GTAC 1 cut(s) 141
DdeI CTNAG 1 cut(s) 305
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Eco47I GGWCC 2 cut(s) 337, 355
Eco57I CTGAAG 2 cut(s) 165, 231
EcoO109I RGGNCCY 1 cut(s) 355
FaeI CATG 3 cut(s) 44, 114, 195
FaiI YATR 6 cut(s) 42, 48, 112, 154, 193, 260
FaqI GGGAC 1 cut(s) 134
FatI CATG 3 cut(s) 40, 110, 191
GsuI CTGGAG 1 cut(s) 78
Hin1II CATG 3 cut(s) 44, 114, 195
HinfI GANTC 1 cut(s) 4
HphI GGTGA 2 cut(s) 191, 235
Hpy188I TCNGA 2 cut(s) 128, 368
Hpy188III TCNNGA 2 cut(s) 57, 298
HpyAV CCTTC 2 cut(s) 20, 95
HpyCH4IV ACGT 2 cut(s) 156, 323
HpyCH4V TGCA 1 cut(s) 28
HpyF3I CTNAG 1 cut(s) 305
HpySE526I ACGT 2 cut(s) 156, 323
Hsp92II CATG 3 cut(s) 44, 114, 195
Kzo9I GATC 1 cut(s) 217
LpnPI CCDG 6 cut(s) 42, 146, 249, 283, 317, 319
MaeII ACGT 2 cut(s) 156, 323
MaeIII GTNAC 2 cut(s) 179, 241
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MboII GAAGA 1 cut(s) 148
MflI RGATCY 1 cut(s) 217
MluCI AATT 1 cut(s) 361
MmeI TCCRAC 1 cut(s) 298
MnlI CCTC 4 cut(s) 53, 109, 302, 346
MseI TTAA 1 cut(s) 204
MslI CAYNNNNRTG 1 cut(s) 45
NdeII GATC 1 cut(s) 217
NlaIII CATG 3 cut(s) 44, 114, 195
NlaIV GGNNCC 3 cut(s) 302, 338, 357
NmuCI GTSAC 2 cut(s) 179, 241
PpuMI RGGWCCY 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 355
PspN4I GGNNCC 3 cut(s) 302, 338, 357
PspPI GGNCC 2 cut(s) 337, 355
PspPPI RGGWCCY 1 cut(s) 355
PsuI RGATCY 1 cut(s) 217
RsaI GTAC 1 cut(s) 142
RsaNI GTAC 1 cut(s) 141
RseI CAYNNNNRTG 1 cut(s) 45
SaqAI TTAA 1 cut(s) 204
Sau3AI GATC 1 cut(s) 217
Sau96I GGNCC 2 cut(s) 337, 355
ScaI AGTACT 1 cut(s) 142
SetI ASST 4 cut(s) 159, 265, 306, 326
SinI GGWCC 2 cut(s) 337, 355
SmiMI CAYNNNNRTG 1 cut(s) 45
Sse9I AATT 1 cut(s) 361
SsiI CCGC 1 cut(s) 63
TaiI ACGT 2 cut(s) 159, 326
TaqI TCGA 2 cut(s) 96, 351
TasI AATT 1 cut(s) 361
TatI WGTACW 1 cut(s) 140
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TseFI GTSAC 2 cut(s) 179, 241
Tsp45I GTSAC 2 cut(s) 179, 241
TspDTI ATGAA 2 cut(s) 29, 114
TspGWI ACGGA 1 cut(s) 329
VpaK11BI GGWCC 2 cut(s) 337, 355
ZrmI AGTACT 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.