Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000539.1

Orthogroup ID

OG0001177

Physical Location & Seq

Genomic Coordinates Reverse (-)

253123 .. 256092

Gene Structure 2970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000539.1_g000055.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

atgtcagagaaacaagcccacttgaatggagcctactacggcccatccgtcccgccacgagagacctaccaccgccccggccgcggtggaggtctcctcagctgctgctgcagctgcatcttcagtctcgtcttcaagctcatcttcgccgcagttgtcttcttgggcttagccttcctcgtcttctggctcatagtcaggccaaccggagtcaagttccacgtcacggatgccaccctcacccagttcaacttctcctccgacaacaacctccactacaatctcgctgccaacctcaccatccgaaaccccaacaagaagatcggcatctactacgatcgcatcgaagccagagccctgtacgaggggcaaaggttcagtacggttactctcacgccgttttaccaaggccataaaactacaaacgttctgaacccggtgtttcagggacaacaattgattgttggatccaacttgcttgaggagtttaatcaacagaagagtgcaggggtttacgagattgagatgaagctttatctgaggattcggttcaagttgggtagaatcaaaaccggaaagttcaagcctagaattgagtgtgacttgaaggttcctttgaaccagaatgggaattcagttgtccttggtagcatgcagactaccaactgcgatattggttatcacagcagttcttatcttgttcatgagttcatccggccagctgcattaaccaatttctcctccactattactacaggctctccaagaaaaatcagagtagggagagtagtatgtgtccaacaaagcagaagcaccagagtttcagagttgatcacgccggcaaatgctccagatccggagagtccacaacctccatcgccgactggatttttgagacaatccaaggcggatccttaccccacgtcgacctccacattgaaacgaacggctaggcttggcggagagcttggctgttggcagttccacccggagctcttgttccttcccaaatctcctcctggcatgcttgaatttcatcatcttcattctctctatcacatctctagtactccccactatcctcctccgaatgcccccaacttcaatggacctaaactcgtccaatttcagacccaaggccaccacaaggttgacgatgaagagacgagcagcaccggtgcgccacagtattgttgccgaacggagactgaaagaagaaagaaggtctcaccgaccttgttgccggtgaaggagaagacgggacggcgagcttggcggttatggttagggtttgggggatttgagggaactgggtctgagggtggcggagatgggtttgtgggaagaggaagtgatgaagatttagcagatgaaggagtgatgaggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LEA_2

Protein Analysis

462

Amino Acids

51.44

Weight (kDa)

9.34

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35460 AT2G35980 AT3G11650 AT5G06320
fragaria_vesca	FvH4_6g20130 FvH4_6g20140
malus_domestica	MD12G1038600.v1.1 MD14G1037300.v1.1
prunus_persica	Prupe.6G357300_v2.0.a1 Prupe.7G097200_v2.0.a1
pyrus_communis	pycom14g03260
rosa_chinensis	RchiOBHm_Chr3g0475591 RchiOBHm_Chr3g0475631 RchiOBHm_Chr3g0475641 RchiOBHm_Chr3g0475651 RchiOBHm_Chr3g0475661
rosa_laevigata	RLG00000023825 RLG00000023826 RLG00000023827 RLG00000023828 RLG00000023830
rosa_multiflora	Rmu_co8195028.1_g000001 Rmu_sc0000539.1_g000033 Rmu_sc0000539.1_g000043 Rmu_sc0000539.1_g000048 Rmu_sc0000539.1_g000055
rosa_roxburghii	Rroxscaffold_6G00406030 Rroxscaffold_6G00406040 Rroxscaffold_6G00406070 Rroxscaffold_6G00406080 Rroxscaffold_6G00406100 Rroxscaffold_6G00406110
rosa_rugosa	Rorug03G0150500 Rorug03G0150500 Rorug03G0150600 Rorug03G0150700 Rorug03G0150800 Rorug03G0150800
rosa_samantha	Rh3AG200100 Rh3AG200200 Rh3AG200300 Rh3BG230500 Rh3BG230600 Rh3BG230700 Rh3CG224800 Rh3CG225000 Rh3CG225100 Rh3CG225200 Rh3CG225300 Rh3DG225600 Rh3DG225700 Rh3DG225800
rosa_wichuraiana	Rw3G018150 Rw3G018170 Rw3G018180 Rw3G018190 Rw3G018200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	926
AccII	CGCG	1 cut(s)	84
AccIII	TCCGGA	1 cut(s)	856
AciI	CCGC	9 cut(s)	53, 73, 82, 84, 150, 908, 960, 1276, 1326
AclI	AACGTT	1 cut(s)	426
AclWI	GGATC	5 cut(s)	462, 475, 848, 905, 918
AcoI	YGGCCR	2 cut(s)	79, 716
AcsI	RAATTY	2 cut(s)	631, 1031
AcuI	CTGAAG	1 cut(s)	106
AfaI	GTAC	3 cut(s)	362, 382, 1069
AfiI	CCNNNNNNNGG	4 cut(s)	83, 226, 364, 1147
AgeI	ACCGGT	1 cut(s)	1175
AjiI	CACGTC	2 cut(s)	223, 924
AjnI	CCWGG	1 cut(s)	1018
AloI	GAACNNNNNNTCC	2 cut(s)	983, 1015
AluBI	AGCT	8 cut(s)	102, 114, 139, 532, 722, 967, 994, 1271
AluI	AGCT	8 cut(s)	102, 114, 139, 532, 722, 967, 994, 1271
Alw21I	GWGCWC	1 cut(s)	996
Alw26I	GTCTC	7 cut(s)	56, 98, 131, 889, 1157, 1199, 1231
AlwI	GGATC	5 cut(s)	462, 475, 848, 905, 918
AlwNI	CAGNNNCTG	1 cut(s)	105
Aor13HI	TCCGGA	1 cut(s)	856
AoxI	GGCC	6 cut(s)	40, 79, 200, 409, 716, 1138
ApeKI	GCWGC	8 cut(s)	102, 105, 108, 111, 114, 287, 722, 1170
ApoI	RAATTY	2 cut(s)	631, 1031
ArsI	GACNNNNNNTTYG	2 cut(s)	874, 906
AsiGI	ACCGGT	1 cut(s)	1175
AspLEI	GCGC	1 cut(s)	1183
AspS9I	GGNCC	2 cut(s)	41, 1109
AsuC2I	CCSGG	3 cut(s)	78, 437, 989
AsuHPI	GGTGA	4 cut(s)	232, 289, 1221, 1258
AvaII	GGWCC	1 cut(s)	1109
BamHI	GGATCC	2 cut(s)	467, 910
BanII	GRGCYC	2 cut(s)	358, 996
BauI	CACGAG	1 cut(s)	57
BbsI	GAAGAC	4 cut(s)	124, 151, 175, 1262
Bbv12I	GWGCWC	1 cut(s)	996
BbvCI	CCTCAGC	1 cut(s)	98
BbvI	GCAGC	8 cut(s)	89, 92, 95, 101, 123, 274, 709, 1182
BccI	CCATC	4 cut(s)	52, 308, 883, 1325
BceAI	ACGGC	4 cut(s)	55, 382, 963, 1280
BcgI	CGANNNNNNTGC	2 cut(s)	1222, 1256
BciT130I	CCWGG	1 cut(s)	1020
BclI	TGATCA	1 cut(s)	831
BcnI	CCSGG	3 cut(s)	78, 437, 989
BcoDI	GTCTC	7 cut(s)	56, 98, 131, 889, 1157, 1199, 1231
BfaI	CTAG	3 cut(s)	588, 951, 1065
BfmI	CTRYAG	2 cut(s)	109, 753
BlpI	GCTNAGC	1 cut(s)	169
BmcAI	AGTACT	1 cut(s)	1069
Bme1390I	CCNGG	4 cut(s)	78, 437, 989, 1020
Bme18I	GGWCC	1 cut(s)	1109
BmgBI	CACGTC	2 cut(s)	223, 924
BmgT120I	GGNCC	2 cut(s)	41, 1109
BmiI	GGNNCC	4 cut(s)	31, 469, 612, 912
BmrFI	CCNGG	4 cut(s)	78, 437, 989, 1020
BmrI	ACTGGG	2 cut(s)	238, 1320
BmsI	GCATC	4 cut(s)	126, 220, 336, 351
BmuI	ACTGGG	2 cut(s)	238, 1320
BpiI	GAAGAC	4 cut(s)	124, 151, 175, 1262
BplI	GAGNNNNNCTC	2 cut(s)	81, 113
BpmI	CTGGAG	1 cut(s)	834
Bpu10I	CCTNAGC	1 cut(s)	98
Bpu1102I	GCTNAGC	1 cut(s)	169
BpuEI	CTTGAG	1 cut(s)	500
BpuMI	CCSGG	3 cut(s)	78, 437, 989
BsaBI	GATNNNNATC	1 cut(s)	326
BsaI	GGTCTC	3 cut(s)	56, 98, 1231
BsaJI	CCNNGG	6 cut(s)	76, 82, 406, 643, 903, 1135
BsaWI	WCCGGW	4 cut(s)	206, 572, 856, 1175
BsaXI	ACNNNNNCTCC	6 cut(s)	242, 272, 745, 775, 983, 1013
Bsc4I	CCNNNNNNNGG	4 cut(s)	83, 226, 364, 1147
Bse118I	RCCGGY	3 cut(s)	838, 1175, 1243
Bse1I	ACTGG	3 cut(s)	244, 889, 1315
Bse8I	GATNNNNATC	1 cut(s)	326
BseAI	TCCGGA	1 cut(s)	856
BseBI	CCWGG	1 cut(s)	1020
BseDI	CCNNGG	6 cut(s)	76, 82, 406, 643, 903, 1135
BseGI	GGATG	4 cut(s)	44, 235, 300, 711
BseJI	GATNNNNATC	1 cut(s)	326
BseLI	CCNNNNNNNGG	4 cut(s)	83, 226, 364, 1147
BseMII	CTCAG	3 cut(s)	112, 530, 1308
BseNI	ACTGG	3 cut(s)	244, 889, 1315
BseRI	GAGGAG	6 cut(s)	86, 247, 497, 730, 1005, 1074
BseX3I	CGGCCG	1 cut(s)	79
BseXI	GCAGC	8 cut(s)	89, 92, 95, 101, 123, 274, 709, 1182
BsgI	GTGCAG	1 cut(s)	525
Bsh1236I	CGCG	1 cut(s)	84
Bsh1285I	CGRYCG	2 cut(s)	82, 340
BshFI	GGCC	6 cut(s)	42, 81, 202, 411, 718, 1140
BshTI	ACCGGT	1 cut(s)	1175
BsiEI	CGRYCG	2 cut(s)	82, 340
BsiHKAI	GWGCWC	1 cut(s)	996
BslFI	GGGAC	3 cut(s)	35, 462, 1275
BslI	CCNNNNNNNGG	4 cut(s)	83, 226, 364, 1147
BsmAI	GTCTC	7 cut(s)	56, 98, 131, 889, 1157, 1199, 1231
BsmBI	CGTCTC	1 cut(s)	1157
BsmFI	GGGAC	3 cut(s)	35, 462, 1275
BsmI	GAATGC	1 cut(s)	1096
BsnI	GGCC	6 cut(s)	42, 81, 202, 411, 718, 1140
Bso31I	GGTCTC	3 cut(s)	56, 98, 1231
Bsp1286I	GDGCHC	2 cut(s)	358, 996
Bsp13I	TCCGGA	1 cut(s)	856
Bsp143I	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
Bsp1720I	GCTNAGC	1 cut(s)	169
BspACI	CCGC	9 cut(s)	53, 73, 82, 84, 150, 908, 960, 1276, 1326
BspANI	GGCC	6 cut(s)	42, 81, 202, 411, 718, 1140
BspCNI	CTCAG	3 cut(s)	111, 531, 1309
BspEI	TCCGGA	1 cut(s)	856
BspFNI	CGCG	1 cut(s)	84
BspHI	TCATGA	1 cut(s)	703
BspLI	GGNNCC	4 cut(s)	31, 469, 612, 912
BspMAI	CTGCAG	1 cut(s)	113
BspPI	GGATC	5 cut(s)	462, 475, 848, 905, 918
BspTNI	GGTCTC	3 cut(s)	56, 98, 1231
BsrFI	RCCGGY	3 cut(s)	838, 1175, 1243
BsrI	ACTGG	3 cut(s)	244, 889, 1315
BssAI	RCCGGY	3 cut(s)	838, 1175, 1243
BssECI	CCNNGG	6 cut(s)	76, 82, 406, 643, 903, 1135
BssMI	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
BssSI	CACGAG	1 cut(s)	57
BssT1I	CCWWGG	4 cut(s)	406, 643, 903, 1135
Bst2BI	CACGAG	1 cut(s)	57
Bst2UI	CCWGG	1 cut(s)	1020
Bst4CI	ACNGT	2 cut(s)	385, 1188
Bst6I	CTCTTC	3 cut(s)	494, 1155, 1339
BstC8I	GCNNGC	5 cut(s)	653, 720, 840, 1025, 1269
BstDEI	CTNAG	4 cut(s)	98, 169, 539, 1317
BstDSI	CCRYGG	1 cut(s)	82
BstENI	CCTNNNNNAGG	1 cut(s)	362
BstF5I	GGATG	4 cut(s)	44, 235, 300, 711
BstFNI	CGCG	1 cut(s)	84
BstHHI	GCGC	1 cut(s)	1183
BstKTI	GATC	6 cut(s)	324, 340, 470, 834, 856, 913
BstMAI	GTCTC	7 cut(s)	56, 98, 131, 889, 1157, 1199, 1231
BstMBI	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
BstMCI	CGRYCG	2 cut(s)	82, 340
BstMWI	GCNNNNNNNGC	5 cut(s)	81, 108, 111, 114, 1273
BstNI	CCWGG	1 cut(s)	1020
BstNSI	RCATGY	2 cut(s)	655, 1027
BstSCI	CCNGG	4 cut(s)	76, 435, 987, 1018
BstSFI	CTRYAG	2 cut(s)	109, 753
BstUI	CGCG	1 cut(s)	84
BstV1I	GCAGC	8 cut(s)	89, 92, 95, 101, 123, 274, 709, 1182
BstV2I	GAAGAC	4 cut(s)	124, 151, 175, 1262
BstX2I	RGATCY	3 cut(s)	467, 853, 910
BstXI	CCANNNNNNTGG	1 cut(s)	26
BstYI	RGATCY	3 cut(s)	467, 853, 910
BstZI	CGGCCG	1 cut(s)	79
BsuRI	GGCC	6 cut(s)	42, 81, 202, 411, 718, 1140
BtgI	CCRYGG	1 cut(s)	82
BtgZI	GCGATG	1 cut(s)	861
BtrI	CACGTC	2 cut(s)	223, 924
BtsCI	GGATG	4 cut(s)	44, 235, 300, 711
Cac8I	GCNNGC	5 cut(s)	653, 720, 840, 1025, 1269
CaiI	CAGNNNCTG	1 cut(s)	105
CciI	TCATGA	1 cut(s)	703
CfoI	GCGC	1 cut(s)	1183
Cfr10I	RCCGGY	3 cut(s)	838, 1175, 1243
Cfr13I	GGNCC	2 cut(s)	41, 1109
Cfr42I	CCGCGG	1 cut(s)	85
Csp6I	GTAC	3 cut(s)	361, 381, 1068
CspAI	ACCGGT	1 cut(s)	1175
CviAII	CATG	3 cut(s)	652, 704, 1024
CviQI	GTAC	3 cut(s)	361, 381, 1068
DdeI	CTNAG	4 cut(s)	98, 169, 539, 1317
DpnI	GATC	6 cut(s)	323, 339, 469, 833, 855, 912
DpnII	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
EaeI	YGGCCR	2 cut(s)	79, 716
EagI	CGGCCG	1 cut(s)	79
Eam1104I	CTCTTC	3 cut(s)	494, 1155, 1339
EarI	CTCTTC	3 cut(s)	494, 1155, 1339
EciI	GGCGGA	3 cut(s)	923, 975, 1341
Ecl136II	GAGCTC	1 cut(s)	994
EclXI	CGGCCG	1 cut(s)	79
Eco130I	CCWWGG	4 cut(s)	406, 643, 903, 1135
Eco24I	GRGCYC	2 cut(s)	358, 996
Eco31I	GGTCTC	3 cut(s)	56, 98, 1231
Eco47I	GGWCC	1 cut(s)	1109
Eco52I	CGGCCG	1 cut(s)	79
Eco53kI	GAGCTC	1 cut(s)	994
Eco57I	CTGAAG	1 cut(s)	106
EcoICRI	GAGCTC	1 cut(s)	994
EcoNI	CCTNNNNNAGG	1 cut(s)	362
EcoRI	GAATTC	1 cut(s)	631
EcoRII	CCWGG	1 cut(s)	1018
EcoT14I	CCWWGG	4 cut(s)	406, 643, 903, 1135
EcoT38I	GRGCYC	2 cut(s)	358, 996
ErhI	CCWWGG	4 cut(s)	406, 643, 903, 1135
Esp3I	CGTCTC	1 cut(s)	1157
FaeI	CATG	3 cut(s)	655, 707, 1027
FaiI	YATR	7 cut(s)	194, 414, 653, 705, 793, 1025, 1282
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	3 cut(s)	35, 462, 1275
FatI	CATG	3 cut(s)	651, 703, 1023
FauI	CCCGC	1 cut(s)	60
FbaI	TGATCA	1 cut(s)	831
FblI	GTMKAC	1 cut(s)	926
FokI	GGATG	4 cut(s)	31, 242, 287, 698
FriOI	GRGCYC	2 cut(s)	358, 996
FspBI	CTAG	3 cut(s)	588, 951, 1065
GlaI	GCGC	1 cut(s)	1182
GsuI	CTGGAG	1 cut(s)	834
HaeIII	GGCC	6 cut(s)	42, 81, 202, 411, 718, 1140
HhaI	GCGC	1 cut(s)	1183
Hin1II	CATG	3 cut(s)	655, 707, 1027
Hin6I	GCGC	1 cut(s)	1181
HinP1I	GCGC	1 cut(s)	1181
HincII	GTYRAC	2 cut(s)	927, 1153
HindII	GTYRAC	2 cut(s)	927, 1153
HindIII	AAGCTT	1 cut(s)	530
HinfI	GANTC	4 cut(s)	210, 544, 564, 862
HphI	GGTGA	4 cut(s)	232, 289, 1221, 1258
Hpy166II	GTNNAC	4 cut(s)	514, 866, 927, 1153
Hpy188III	TCNNGA	3 cut(s)	704, 851, 857
Hpy8I	GTNNAC	4 cut(s)	514, 866, 927, 1153
Hpy99I	CGWCG	1 cut(s)	928
HpyAV	CCTTC	6 cut(s)	184, 601, 1013, 1216, 1243, 1367
HpyCH4III	ACNGT	2 cut(s)	385, 1188
HpyCH4IV	ACGT	3 cut(s)	222, 426, 923
HpyCH4V	TGCA	5 cut(s)	111, 117, 506, 655, 725
HpyF10VI	GCNNNNNNNGC	5 cut(s)	81, 108, 111, 114, 1273
HpyF3I	CTNAG	4 cut(s)	98, 169, 539, 1317
HpySE526I	ACGT	3 cut(s)	222, 426, 923
Hsp92II	CATG	3 cut(s)	655, 707, 1027
HspAI	GCGC	1 cut(s)	1181
Kpn2I	TCCGGA	1 cut(s)	856
KroI	GCCGGC	1 cut(s)	838
KroNI	GCCGGC	1 cut(s)	840
Ksp22I	TGATCA	1 cut(s)	831
KspI	CCGCGG	1 cut(s)	85
Kzo9I	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
LmnI	GCTCC	3 cut(s)	29, 853, 991
Lsp1109I	GCAGC	8 cut(s)	89, 92, 95, 101, 123, 274, 709, 1182
LweI	GCATC	4 cut(s)	126, 220, 336, 351
MaeI	CTAG	3 cut(s)	588, 951, 1065
MaeII	ACGT	3 cut(s)	222, 426, 923
MaeIII	GTNAC	3 cut(s)	223, 385, 599
MalI	GATC	6 cut(s)	323, 339, 469, 833, 855, 912
MboI	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
MfeI	CAATTG	1 cut(s)	455
MflI	RGATCY	3 cut(s)	467, 853, 910
MhlI	GDGCHC	2 cut(s)	358, 996
MluCI	AATT	6 cut(s)	455, 591, 631, 733, 1031, 1124
MlyI	GAGTC	2 cut(s)	219, 871
MmeI	TCCRAC	4 cut(s)	285, 445, 495, 823
MroI	TCCGGA	1 cut(s)	856
MroNI	GCCGGC	1 cut(s)	838
MseI	TTAA	2 cut(s)	489, 728
MslI	CAYNNNNRTG	1 cut(s)	24
MspA1I	CMGCKG	4 cut(s)	84, 102, 114, 722
MspR9I	CCNGG	4 cut(s)	78, 437, 989, 1020
MunI	CAATTG	1 cut(s)	455
Mva1269I	GAATGC	1 cut(s)	1096
MvaI	CCWGG	1 cut(s)	1020
MvnI	CGCG	1 cut(s)	84
MwoI	GCNNNNNNNGC	5 cut(s)	81, 108, 111, 114, 1273
NaeI	GCCGGC	1 cut(s)	840
NciI	CCSGG	3 cut(s)	78, 437, 989
NdeII	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
NgoMIV	GCCGGC	1 cut(s)	838
NlaIII	CATG	3 cut(s)	655, 707, 1027
NlaIV	GGNNCC	4 cut(s)	31, 469, 612, 912
NmuCI	GTSAC	2 cut(s)	223, 599
NspI	RCATGY	2 cut(s)	655, 1027
PaeI	GCATGC	2 cut(s)	655, 1027
PagI	TCATGA	1 cut(s)	703
PcsI	WCGNNNNNNNCGW	2 cut(s)	45, 342
PctI	GAATGC	1 cut(s)	1096
PdiI	GCCGGC	1 cut(s)	840
PfeI	GAWTC	2 cut(s)	544, 564
PinAI	ACCGGT	1 cut(s)	1175
Ple19I	CGATCG	1 cut(s)	340
PleI	GAGTC	2 cut(s)	218, 870
PpsI	GAGTC	2 cut(s)	218, 870
Psp124BI	GAGCTC	1 cut(s)	996
Psp1406I	AACGTT	1 cut(s)	426
Psp6I	CCWGG	1 cut(s)	1018
PspGI	CCWGG	1 cut(s)	1018
PspN4I	GGNNCC	4 cut(s)	31, 469, 612, 912
PspPI	GGNCC	2 cut(s)	41, 1109
PstI	CTGCAG	1 cut(s)	113
PstNI	CAGNNNCTG	1 cut(s)	105
PsuI	RGATCY	3 cut(s)	467, 853, 910
PvuI	CGATCG	1 cut(s)	340
PvuII	CAGCTG	3 cut(s)	102, 114, 722
RsaI	GTAC	3 cut(s)	362, 382, 1069
RsaNI	GTAC	3 cut(s)	361, 381, 1068
RseI	CAYNNNNRTG	1 cut(s)	24
SacI	GAGCTC	1 cut(s)	996
SacII	CCGCGG	1 cut(s)	85
SalI	GTCGAC	1 cut(s)	925
SaqAI	TTAA	2 cut(s)	489, 728
Sau3AI	GATC	6 cut(s)	321, 337, 467, 831, 853, 910
Sau96I	GGNCC	2 cut(s)	41, 1109
ScaI	AGTACT	1 cut(s)	1069
SchI	GAGTC	2 cut(s)	219, 871
ScrFI	CCNGG	4 cut(s)	78, 437, 989, 1020
SduI	GDGCHC	2 cut(s)	358, 996
SfaNI	GCATC	4 cut(s)	126, 220, 336, 351
SfcI	CTRYAG	2 cut(s)	109, 753
Sfr303I	CCGCGG	1 cut(s)	85
SgrAI	CRCCGGYG	1 cut(s)	1175
SgrBI	CCGCGG	1 cut(s)	85
SinI	GGWCC	1 cut(s)	1109
SmiMI	CAYNNNNRTG	1 cut(s)	24
SmlI	CTYRAG	1 cut(s)	479
SmoI	CTYRAG	1 cut(s)	479
SphI	GCATGC	2 cut(s)	655, 1027
Sse9I	AATT	6 cut(s)	455, 591, 631, 733, 1031, 1124
SsiI	CCGC	9 cut(s)	53, 73, 82, 84, 150, 908, 960, 1276, 1326
SspMI	CTAG	3 cut(s)	588, 951, 1065
SstI	GAGCTC	1 cut(s)	996
StyD4I	CCNGG	4 cut(s)	76, 435, 987, 1018
StyI	CCWWGG	4 cut(s)	406, 643, 903, 1135
TaaI	ACNGT	2 cut(s)	385, 1188
TaiI	ACGT	3 cut(s)	225, 429, 926
TaqI	TCGA	2 cut(s)	345, 926
TasI	AATT	6 cut(s)	455, 591, 631, 733, 1031, 1124
TatI	WGTACW	1 cut(s)	1067
TauI	GCSGC	2 cut(s)	84, 152
TfiI	GAWTC	2 cut(s)	544, 564
Tru1I	TTAA	2 cut(s)	489, 728
Tru9I	TTAA	2 cut(s)	489, 728
TseFI	GTSAC	2 cut(s)	223, 599
TseI	GCWGC	8 cut(s)	102, 105, 108, 111, 114, 287, 722, 1170
Tsp45I	GTSAC	2 cut(s)	223, 599
TspDTI	ATGAA	8 cut(s)	542, 692, 700, 1025, 1034, 1173, 1371, 1386
TspGWI	ACGGA	3 cut(s)	37, 242, 1217
VpaK11BI	GGWCC	1 cut(s)	1109
XagI	CCTNNNNNAGG	1 cut(s)	362
XapI	RAATTY	2 cut(s)	631, 1031
XceI	RCATGY	2 cut(s)	655, 1027
XmiI	GTMKAC	1 cut(s)	926
XspI	CTAG	3 cut(s)	588, 951, 1065
ZrmI	AGTACT	1 cut(s)	1069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.