Rmu_sc0001639.1_g000025

PWWP domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001639.1
OG0002940
Physical Location & Seq
Reverse (-)
110619 .. 114008
3390 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3390 bp
atggctcggataagaaagcacggggctaatttctctggggagggaggagttgagagcgttgatgatagtgatgcagtagtgggtgaggacatgagtgagggtttggaagagggagatgaattggtagatggaggtggtgattctggagggaaagtaggacctgtagatatggagattgatgagaaaggtggagatggagtgacagagggtttggaggggactcaatttgggggtactgatgcgaatgcagcgagtgagaaagggtcggtttcggaatcgaaggatggttctaagggagttgaaagttcagtctttagtgacaaggataggggtaaagatgagattgtaagggaaagcgtggaacctgtagctgtgggtactgtggaagggaacctctcgattagttttgaggcgaaggaggatggaacagttgagggaaaggatgaattgatgagagatgacaaagaagaggaagttgcacaagtagatgaggaagagagagaaagagaacagaatgtcgagtgtagccagagtgcccatgctacaagttctaaattggagcatgaggctacagggtctgttggagaaataccgcaggacatcccagctgtggaagtgaaaattgccagtattgatgagtctgggcatgatggagacctgaatgcaagcactggttcccagatggttatgtctggtggactagaaaatcagacgttggaagttaatgtgggagtaaagaccggtgaagatgtcttgatgcctgaatatgtttccccagcagaggtttctgtgaaatctgaaaatgggcataatttgattgacatgggtattgatttggaaccgtatgctggaaaggatgggaatgtttcagatgatagtaatgtttcagatgatagtaatgtttctggtccctcacaaccagaatttcaagcttttgatctagtatggggcaaaattaggagccatccatggtggcctgggcagatatgtgatccttcagcttcatcaaaacttgcaaagaagtattttaagaagcacagttatctgatagcttatttttgggattgtacatttgcttggaatgaagcaccacaaattaagccctttagggagaacttttcacaaatggaaaagcagagcaatatggaggaattccaaaatgcagttgcttgtgctctggatgaagtctcaaggcgagtagagtttggattggcctgttcttgcatttccaaagaagtatatgcaaagctcaaaacacagacgatcattaatgctggaatcaaggaagaagcatgtagaagagatggtggtgatagttcactgggtgctgcttcttttgaacccttgaaactcattaactttgcaaaacaagccgccaagctgccatttggcagagctgacagactcgaacttgttacatcacgggcccaattatcatctttctatcgttggaagggttattctcagctgccagagttcaattttcttggtgggttgctggaaaatgatgccgacatttcactattgagagaaaaggagcaatttaatgaactactggaagttgcacttccagtaattaaggatgaggaattggagcagaaatcaaaagggaaaagctcctcattgcataagcggaagcacgtatctggagatagttcccaaccaggtaaaaaagggaaaaactcctcaaatgtaactgctgagaagggtttgtctactcccatgagtgagaatggatcagaaaggaaagctgactgtaagttggtttcacaatcctcaagtaagaaacgaaaggctgttgatggagctatgcctgatgactctgcggtgaaacatagtaaaagcacttcatcagcagtggaagatactgtttctttacagaataagcagacttttagagttggagatagaatctgtagggttgcaaccctactaaatgggtcaagtccaatattcaggcacaatgcagcacctgcagatactgaagttcaggatgaaggcaaagagaaatcttcatcgcagaaaccacaaactgaaaagctgattgacatggaggatccttctcctgatgagatgctgtctcagctttgcttggctgccatgaatcccaataaagggtacagcatgttgatttccttgatgggttgcttctcaaaatttaggaatactatatgcctggaacctcccagtccagatgaggatcaattgcctttgggacaaatatttggtagcaagcgcagtaagaaatcaaccaagactggaaagaaatcaatcaaaccacgcatctctgaaaaatctgagttggagctggtcaaagactcttattcttctgataggatagttaagagtcaaaatgaaaatggagagttattgcttggagctgcaagcgataaagttacatgtgttgtggagtcacagtcaagtcctgattcggaagcactgaagccagttcttgacaataaaaatggagagttggtgtgtggaactgcaacaagcgataaggatacttctactgttgaactgcaagcaagtcttgagttaaatcccattttggattctgaacagaacattgtttgtggagatattgaatcaaaagcagtgaacacagctgctacaagcgataaggatacttatactgttgaactgcaagcaactctcgagttaaatcccaatttggattctgaacagaacattgtttatggagatattgattcaaaagcagtgaacccagctctggatgatgaaaatggagcattagtacgtgagcccatctctgttgttgagtcaccagcagatcccaagttaaatcccaatttggattttgaacaggaaaatacagtaacagatactggtgcggaagcagtgaagccagctcttgacgatgaaagtggagagttggtggctggagctctaagtaataaggatgcttccgctgtggattcgcaagcaagtcttgagttcaatcccaatatggattctgcactgaaatttcctgatggagatcatgattcagaagcagtgaagccagcttccccaagtgagagttgtgacgaagattctcccgcagctctgatcttgaacttttcagacttggagtctcttccctcggaagcaagtctaaacaatatttttagcatcttcgggcctctgaatgaatcgcaaaccgaattgttgaagaagacaaaccgggccaaagtggttttcaggcggcgttctgatgctcaaaaagctttcagcagtgctgggaaatacagtacctttggaccttcacttgaaagttatcgcctcaagtatccgctatcaccaagtaaagcttctccttctccgaaggtgggaaagcaaggaaaaatggatgcatctgcagaaggtgatggagctagaaaacactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PWWP

Protein Analysis

1129

Amino Acids

121.61

Weight (kDa)

4.65

Isoelectric Point (pI)

46.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 313 - 395 2.1e-17 PWWP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1981
Acc36I ACCTGC 1 cut(s) 1981
AccI GTMKAC 1 cut(s) 1715
AciI CCGC 9 cut(s) 593, 1374, 1633, 1826, 2855, 2931, 3063, 3208, 3296
AclWI GGATC 6 cut(s) 986, 1744, 2051, 2064, 2208, 2789
AcsI RAATTY 4 cut(s) 923, 1151, 2156, 2987
AcuI CTGAAG 3 cut(s) 981, 2004, 2462
AdeI CACNNNGTG 1 cut(s) 1325
AfaI GTAC 6 cut(s) 235, 379, 1069, 2120, 2760, 3256
AfiI CCNNNNNNNGG 7 cut(s) 610, 781, 848, 2114, 2115, 2734, 3332
AflIII ACRYGT 1 cut(s) 2399
AgeI ACCGGT 1 cut(s) 740
AhdI GACNNNNNGTC 1 cut(s) 3094
AjnI CCWGG 3 cut(s) 976, 1663, 2175
AjuI GAANNNNNNNTTGG 4 cut(s) 3185, 3217, 3298, 3330
Alw21I GWGCWC 2 cut(s) 1177, 2911
Alw26I GTCTC 4 cut(s) 648, 1192, 2085, 3102
AlwI GGATC 6 cut(s) 986, 1744, 2051, 2064, 2208, 2789
AlwNI CAGNNNCTG 4 cut(s) 578, 1973, 1982, 2849
Ama87I CYCGRG 1 cut(s) 2657
AoxI GGCC 5 cut(s) 974, 1212, 1425, 3143, 3189
ApaI GGGCCC 1 cut(s) 1429
ApeKI GCWGC 9 cut(s) 248, 1328, 1381, 1468, 1967, 2096, 2381, 2609, 3065
ApoI RAATTY 4 cut(s) 923, 1151, 2156, 2987
ArsI GACNNNNNNTTYG 2 cut(s) 193, 225
AseI ATTAAT 1 cut(s) 1269
AsiGI ACCGGT 1 cut(s) 740
AspLEI GCGC 1 cut(s) 2238
AspS9I GGNCC 7 cut(s) 158, 908, 1425, 1426, 3143, 3189, 3263
AsuC2I CCSGG 1 cut(s) 3188
AsuHPI GGTGA 8 cut(s) 95, 149, 755, 1322, 1840, 2778, 3294, 3380
AvaI CYCGRG 1 cut(s) 2657
AvaII GGWCC 3 cut(s) 158, 908, 3263
BaeGI GKGCMC 2 cut(s) 538, 1429
BaeI ACNNNNGTAYC 2 cut(s) 1971, 2004
BamHI GGATCC 1 cut(s) 2056
BanII GRGCYC 3 cut(s) 1429, 2769, 2911
BarI GAAGNNNNNNTAC 2 cut(s) 1831, 1863
BbsI GAAGAC 1 cut(s) 3185
Bbv12I GWGCWC 2 cut(s) 1177, 2911
BbvI GCAGC 9 cut(s) 260, 1315, 1368, 1455, 1979, 2083, 2368, 2596, 3077
BciT130I CCWGG 3 cut(s) 978, 1665, 2177
BciVI GTATCC 3 cut(s) 2497, 2620, 3303
BcnI CCSGG 1 cut(s) 3188
BcoDI GTCTC 4 cut(s) 648, 1192, 2085, 3102
BfaI CTAG 3 cut(s) 701, 941, 3378
BfmI CTRYAG 6 cut(s) 162, 366, 570, 1915, 1974, 3360
BfuAI ACCTGC 1 cut(s) 1981
BfuI GTATCC 3 cut(s) 2497, 2620, 3303
Bme1390I CCNGG 4 cut(s) 978, 1665, 2177, 3188
Bme18I GGWCC 3 cut(s) 158, 908, 3263
BmeRI GACNNNNNGTC 1 cut(s) 3094
BmeT110I CYCGRG 1 cut(s) 2657
BmgT120I GGNCC 7 cut(s) 158, 908, 1425, 1426, 3143, 3189, 3263
BmiI GGNNCC 9 cut(s) 363, 392, 676, 840, 910, 962, 1427, 2058, 2181
BmrFI CCNGG 4 cut(s) 978, 1665, 2177, 3188
BmrI ACTGGG 2 cut(s) 1331, 2181
BmuI ACTGGG 2 cut(s) 1331, 2181
BpiI GAAGAC 1 cut(s) 3185
BplI GAGNNNNNCTC 2 cut(s) 2756, 2788
BpmI CTGGAG 3 cut(s) 165, 1668, 2925
BpuEI CTTGAG 5 cut(s) 1174, 1762, 2555, 2975, 3272
BpuMI CCSGG 1 cut(s) 3188
BsaAI YACGTR 2 cut(s) 1642, 2762
BsaBI GATNNNNATC 2 cut(s) 2199, 3000
BsaI GGTCTC 1 cut(s) 648
BsaJI CCNNGG 3 cut(s) 968, 977, 3105
BsaWI WCCGGW 1 cut(s) 740
Bsc4I CCNNNNNNNGG 7 cut(s) 610, 781, 848, 2114, 2115, 2734, 3332
Bse118I RCCGGY 1 cut(s) 740
Bse1I ACTGG 9 cut(s) 627, 676, 1326, 1560, 1571, 2187, 2263, 2447, 2854
Bse3DI GCAATG 1 cut(s) 1622
Bse8I GATNNNNATC 2 cut(s) 2199, 3000
BseBI CCWGG 3 cut(s) 978, 1665, 2177
BseDI CCNNGG 3 cut(s) 968, 977, 3105
BseJI GATNNNNATC 2 cut(s) 2199, 3000
BseLI CCNNNNNNNGG 7 cut(s) 610, 781, 848, 2114, 2115, 2734, 3332
BseMI GCAATG 1 cut(s) 1622
BseMII CTCAG 4 cut(s) 1478, 1692, 2096, 2289
BseNI ACTGG 9 cut(s) 627, 676, 1326, 1560, 1571, 2187, 2263, 2447, 2854
BseRI GAGGAG 3 cut(s) 60, 1609, 1675
BseSI GKGCMC 2 cut(s) 538, 1429
BseXI GCAGC 9 cut(s) 260, 1315, 1368, 1455, 1979, 2083, 2368, 2596, 3077
BseYI CCCAGC 4 cut(s) 604, 775, 2728, 3242
BsgI GTGCAG 1 cut(s) 2964
BshFI GGCC 5 cut(s) 976, 1214, 1427, 3145, 3191
BshTI ACCGGT 1 cut(s) 740
BsiHKAI GWGCWC 2 cut(s) 1177, 2911
BsiHKCI CYCGRG 1 cut(s) 2657
BsiSI CCGG 2 cut(s) 741, 3187
BslFI GGGAC 3 cut(s) 232, 894, 2229
BslI CCNNNNNNNGG 7 cut(s) 610, 781, 848, 2114, 2115, 2734, 3332
BsmAI GTCTC 4 cut(s) 648, 1192, 2085, 3102
BsmFI GGGAC 3 cut(s) 232, 894, 2229
BsmI GAATGC 2 cut(s) 250, 667
BsnI GGCC 5 cut(s) 976, 1214, 1427, 3145, 3191
Bso31I GGTCTC 1 cut(s) 648
BsoBI CYCGRG 1 cut(s) 2657
Bsp120I GGGCCC 1 cut(s) 1425
Bsp1286I GDGCHC 5 cut(s) 538, 1177, 1429, 2769, 2911
Bsp1407I TGTACA 1 cut(s) 1067
Bsp143I GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
Bsp19I CCATGG 1 cut(s) 968
BspACI CCGC 9 cut(s) 593, 1374, 1633, 1826, 2855, 2931, 3063, 3208, 3296
BspANI GGCC 5 cut(s) 976, 1214, 1427, 3145, 3191
BspCNI CTCAG 4 cut(s) 1477, 1693, 2095, 2290
BspHI TCATGA 1 cut(s) 3004
BspLI GGNNCC 9 cut(s) 363, 392, 676, 840, 910, 962, 1427, 2058, 2181
BspMAI CTGCAG 2 cut(s) 1978, 3364
BspMI ACCTGC 1 cut(s) 1981
BspPI GGATC 6 cut(s) 986, 1744, 2051, 2064, 2208, 2789
BspTNI GGTCTC 1 cut(s) 648
BsrDI GCAATG 1 cut(s) 1622
BsrFI RCCGGY 1 cut(s) 740
BsrGI TGTACA 1 cut(s) 1067
BsrI ACTGG 9 cut(s) 627, 676, 1326, 1560, 1571, 2187, 2263, 2447, 2854
BssAI RCCGGY 1 cut(s) 740
BssECI CCNNGG 3 cut(s) 968, 977, 3105
BssMI GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
BssT1I CCWWGG 1 cut(s) 968
Bst2UI CCWGG 3 cut(s) 978, 1665, 2177
Bst6I CTCTTC 5 cut(s) 102, 462, 489, 1294, 3105
BstAPI GCANNNNNTGC 1 cut(s) 1973
BstAUI TGTACA 1 cut(s) 1067
BstBAI YACGTR 2 cut(s) 1642, 2762
BstC8I GCNNGC 8 cut(s) 667, 2234, 2386, 2526, 2649, 2871, 2946, 3027
BstDEI CTNAG 6 cut(s) 291, 1464, 1701, 2082, 2298, 2912
BstDSI CCRYGG 1 cut(s) 968
BstHHI GCGC 1 cut(s) 2238
BstKTI GATC 9 cut(s) 940, 994, 1266, 1739, 2059, 2203, 2797, 3004, 3075
BstMAI GTCTC 4 cut(s) 648, 1192, 2085, 3102
BstMBI GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
BstMWI GCNNNNNNNGC 5 cut(s) 248, 1370, 1973, 2083, 3227
BstNI CCWGG 3 cut(s) 978, 1665, 2177
BstNSI RCATGY 3 cut(s) 1296, 2128, 2403
BstSCI CCNGG 4 cut(s) 976, 1663, 2175, 3186
BstSFI CTRYAG 6 cut(s) 162, 366, 570, 1915, 1974, 3360
BstSLI GKGCMC 2 cut(s) 538, 1429
BstV1I GCAGC 9 cut(s) 260, 1315, 1368, 1455, 1979, 2083, 2368, 2596, 3077
BstV2I GAAGAC 1 cut(s) 3185
BstX2I RGATCY 2 cut(s) 2056, 2794
BstYI RGATCY 2 cut(s) 2056, 2794
BsuI GTATCC 3 cut(s) 2497, 2620, 3303
BsuRI GGCC 5 cut(s) 976, 1214, 1427, 3145, 3191
BtgI CCRYGG 1 cut(s) 968
BtgZI GCGATG 1 cut(s) 2001
BtsI GCAGTG 6 cut(s) 1863, 2604, 2727, 2868, 3024, 3244
BveI ACCTGC 1 cut(s) 1981
Cac8I GCNNGC 8 cut(s) 667, 2234, 2386, 2526, 2649, 2871, 2946, 3027
CaiI CAGNNNCTG 4 cut(s) 578, 1973, 1982, 2849
CciI TCATGA 1 cut(s) 3004
CfoI GCGC 1 cut(s) 2238
Cfr10I RCCGGY 1 cut(s) 740
Cfr13I GGNCC 7 cut(s) 158, 908, 1425, 1426, 3143, 3189, 3263
CsiI ACCWGGT 1 cut(s) 1663
Csp6I GTAC 6 cut(s) 234, 378, 1068, 2119, 2759, 3255
CspAI ACCGGT 1 cut(s) 740
CviQI GTAC 6 cut(s) 234, 378, 1068, 2119, 2759, 3255
DdeI CTNAG 6 cut(s) 291, 1464, 1701, 2082, 2298, 2912
DpnI GATC 9 cut(s) 939, 993, 1265, 1738, 2058, 2202, 2796, 3003, 3074
DpnII GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
DraIII CACNNNGTG 1 cut(s) 1325
DriI GACNNNNNGTC 1 cut(s) 3094
Eam1104I CTCTTC 5 cut(s) 102, 462, 489, 1294, 3105
Eam1105I GACNNNNNGTC 1 cut(s) 3094
EarI CTCTTC 5 cut(s) 102, 462, 489, 1294, 3105
Ecl136II GAGCTC 1 cut(s) 2909
Eco130I CCWWGG 1 cut(s) 968
Eco24I GRGCYC 3 cut(s) 1429, 2769, 2911
Eco31I GGTCTC 1 cut(s) 648
Eco47I GGWCC 3 cut(s) 158, 908, 3263
Eco53kI GAGCTC 1 cut(s) 2909
Eco57I CTGAAG 3 cut(s) 981, 2004, 2462
Eco88I CYCGRG 1 cut(s) 2657
EcoICRI GAGCTC 1 cut(s) 2909
EcoO109I RGGNCCY 1 cut(s) 158
EcoRI GAATTC 1 cut(s) 1151
EcoRII CCWGG 3 cut(s) 976, 1663, 2175
EcoT14I CCWWGG 1 cut(s) 968
EcoT22I ATGCAT 1 cut(s) 3358
EcoT38I GRGCYC 3 cut(s) 1429, 2769, 2911
ErhI CCWWGG 1 cut(s) 968
FalI AAGNNNNNCTT 8 cut(s) 1551, 1583, 2517, 2549, 2937, 2969, 3298, 3330
FaqI GGGAC 3 cut(s) 232, 894, 2229
FauI CCCGC 1 cut(s) 3070
FblI GTMKAC 1 cut(s) 1715
FriOI GRGCYC 3 cut(s) 1429, 2769, 2911
FspBI CTAG 3 cut(s) 701, 941, 3378
GlaI GCGC 1 cut(s) 2237
GsaI CCCAGC 4 cut(s) 608, 779, 2732, 3246
GsuI CTGGAG 3 cut(s) 165, 1668, 2925
HaeIII GGCC 5 cut(s) 976, 1214, 1427, 3145, 3191
HapII CCGG 2 cut(s) 741, 3187
HhaI GCGC 1 cut(s) 2238
Hin6I GCGC 1 cut(s) 2236
HinP1I GCGC 1 cut(s) 2236
HindIII AAGCTT 3 cut(s) 930, 3228, 3312
HpaII CCGG 2 cut(s) 741, 3187
HphI GGTGA 8 cut(s) 95, 149, 755, 1322, 1840, 2778, 3294, 3380
Hpy166II GTNNAC 5 cut(s) 698, 1319, 1716, 2602, 2725
Hpy8I GTNNAC 5 cut(s) 698, 1319, 1716, 2602, 2725
HpyCH4IV ACGT 3 cut(s) 713, 1641, 2761
HpyF10VI GCNNNNNNNGC 5 cut(s) 248, 1370, 1973, 2083, 3227
HpyF3I CTNAG 6 cut(s) 291, 1464, 1701, 2082, 2298, 2912
HpySE526I ACGT 3 cut(s) 713, 1641, 2761
HspAI GCGC 1 cut(s) 2236
Kzo9I GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
Lsp1109I GCAGC 9 cut(s) 260, 1315, 1368, 1455, 1979, 2083, 2368, 2596, 3077
MabI ACCWGGT 1 cut(s) 1663
MaeI CTAG 3 cut(s) 701, 941, 3378
MaeII ACGT 3 cut(s) 713, 1641, 2761
MaeIII GTNAC 9 cut(s) 199, 317, 1414, 1693, 2395, 2412, 2784, 2839, 3047
MalI GATC 9 cut(s) 939, 993, 1265, 1738, 2058, 2202, 2796, 3003, 3074
MboI GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
MfeI CAATTG 1 cut(s) 2204
MflI RGATCY 2 cut(s) 2056, 2794
MhlI GDGCHC 5 cut(s) 538, 1177, 1429, 2769, 2911
MlyI GAGTC 9 cut(s) 214, 647, 1398, 1814, 2312, 2356, 2420, 2792, 3104
MmeI TCCRAC 5 cut(s) 562, 696, 1430, 1882, 2283
Mph1103I ATGCAT 1 cut(s) 3358
MspA1I CMGCKG 4 cut(s) 608, 1468, 2609, 2933
MspI CCGG 2 cut(s) 741, 3187
MspR9I CCNGG 4 cut(s) 978, 1665, 2177, 3188
MunI CAATTG 1 cut(s) 2204
Mva1269I GAATGC 2 cut(s) 250, 667
MvaI CCWGG 3 cut(s) 978, 1665, 2177
MwoI GCNNNNNNNGC 5 cut(s) 248, 1370, 1973, 2083, 3227
NciI CCSGG 1 cut(s) 3188
NcoI CCATGG 1 cut(s) 968
NdeII GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
NlaIV GGNNCC 9 cut(s) 363, 392, 676, 840, 910, 962, 1427, 2058, 2181
NmuCI GTSAC 5 cut(s) 199, 317, 2412, 2784, 3047
NsiI ATGCAT 1 cut(s) 3358
NspI RCATGY 3 cut(s) 1296, 2128, 2403
PaeR7I CTCGAG 1 cut(s) 2657
PagI TCATGA 1 cut(s) 3004
PaqCI CACCTGC 1 cut(s) 1981
PciI ACATGT 1 cut(s) 2399
PctI GAATGC 2 cut(s) 250, 667
PinAI ACCGGT 1 cut(s) 740
PleI GAGTC 9 cut(s) 214, 646, 1398, 1814, 2312, 2355, 2419, 2791, 3103
PpsI GAGTC 9 cut(s) 214, 646, 1398, 1814, 2312, 2355, 2419, 2791, 3103
Ppu21I YACGTR 2 cut(s) 1642, 2762
PpuMI RGGWCCY 1 cut(s) 158
PscI ACATGT 1 cut(s) 2399
PshBI ATTAAT 1 cut(s) 1269
Psp124BI GAGCTC 1 cut(s) 2911
Psp5II RGGWCCY 1 cut(s) 158
Psp6I CCWGG 3 cut(s) 976, 1663, 2175
PspFI CCCAGC 4 cut(s) 604, 775, 2728, 3242
PspGI CCWGG 3 cut(s) 976, 1663, 2175
PspN4I GGNNCC 9 cut(s) 363, 392, 676, 840, 910, 962, 1427, 2058, 2181
PspOMI GGGCCC 1 cut(s) 1425
PspPI GGNCC 7 cut(s) 158, 908, 1425, 1426, 3143, 3189, 3263
PspPPI RGGWCCY 1 cut(s) 158
PstI CTGCAG 2 cut(s) 1978, 3364
PstNI CAGNNNCTG 4 cut(s) 578, 1973, 1982, 2849
PsuI RGATCY 2 cut(s) 2056, 2794
PvuII CAGCTG 3 cut(s) 608, 1468, 2609
RsaI GTAC 6 cut(s) 235, 379, 1069, 2120, 2760, 3256
RsaNI GTAC 6 cut(s) 234, 378, 1068, 2119, 2759, 3255
SacI GAGCTC 1 cut(s) 2911
Sau3AI GATC 9 cut(s) 937, 991, 1263, 1736, 2056, 2200, 2794, 3001, 3072
Sau96I GGNCC 7 cut(s) 158, 908, 1425, 1426, 3143, 3189, 3263
SchI GAGTC 9 cut(s) 214, 647, 1398, 1814, 2312, 2356, 2420, 2792, 3104
ScrFI CCNGG 4 cut(s) 978, 1665, 2177, 3188
SduI GDGCHC 5 cut(s) 538, 1177, 1429, 2769, 2911
SexAI ACCWGGT 1 cut(s) 1663
SfcI CTRYAG 6 cut(s) 162, 366, 570, 1915, 1974, 3360
Sfr274I CTCGAG 1 cut(s) 2657
SinI GGWCC 3 cut(s) 158, 908, 3263
SlaI CTCGAG 1 cut(s) 2657
SmlI CTYRAG 6 cut(s) 1189, 1777, 2534, 2657, 2954, 3287
SmoI CTYRAG 6 cut(s) 1189, 1777, 2534, 2657, 2954, 3287
SsiI CCGC 9 cut(s) 593, 1374, 1633, 1826, 2855, 2931, 3063, 3208, 3296
SspI AATATT 3 cut(s) 1953, 2223, 3127
SspMI CTAG 3 cut(s) 701, 941, 3378
SstI GAGCTC 1 cut(s) 2911
StyD4I CCNGG 4 cut(s) 976, 1663, 2175, 3186
StyI CCWWGG 1 cut(s) 968
TaiI ACGT 3 cut(s) 716, 1644, 2764
TaqI TCGA 5 cut(s) 278, 398, 519, 1407, 2658
TatI WGTACW 1 cut(s) 1067
TauI GCSGC 2 cut(s) 1376, 3211
TseFI GTSAC 5 cut(s) 199, 317, 2412, 2784, 3047
TseI GCWGC 9 cut(s) 248, 1328, 1381, 1468, 1967, 2096, 2381, 2609, 3065
Tsp45I GTSAC 5 cut(s) 199, 317, 2412, 2784, 3047
VpaK11BI GGWCC 3 cut(s) 158, 908, 3263
VspI ATTAAT 1 cut(s) 1269
XapI RAATTY 4 cut(s) 923, 1151, 2156, 2987
XceI RCATGY 3 cut(s) 1296, 2128, 2403
XhoI CTCGAG 1 cut(s) 2657
XmiI GTMKAC 1 cut(s) 1715
XspI CTAG 3 cut(s) 701, 941, 3378
Zsp2I ATGCAT 1 cut(s) 3358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.