Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003160.1

Orthogroup ID

OG0001135

Physical Location & Seq

Genomic Coordinates Forward (+)

139391 .. 143391

Gene Structure 4001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003160.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

atgacccaggtctgttcgccggagccgaaccgcgccgtgttgccggaatttcgttcctgcccgtcctcgccgccattgccggcgaccagtcccgatccgtcggcaattgggccggagtcttgggcccgagccgagcgggccacccgggatatactgtccaagattcagcccacggcggcgactcaccggagaaggaaggatatcattgtatatgtgcagagcctcatcacttgtaacgtgggctgtcaggtttttccttatgggtcagttccattaaagacatatcttcccgatggagatatagacttgacggttttcactggcagtgcgcaccttgaggatgtccttgtaactcatgttcatgctgttctgaagggggaagagaataatgaagctgctcagtatcaagtgaaggatgtccatcgcattgatgctgaggttaaacttgtaaaatgcattgttcaaaatatgattgtagatatatccttcaatcagttaggaggactttctacactacgctttcttgaacaggttgatcactatattggcaaagatcatattttcaaacgcagcattattctgataaaagcctggtgctactatgagagtcgtattcttggtgctcatcatggtttaatttcaacatatgctttggaaacattagtcctatatatattccatctttttcattcttctctagatggccctttaacggtcctctatagatttttggattacttcagcaaatttgattgggagaaatattgtgttagtttaaatggaccagtttgcaaatcctccctacctgatattgtggctgaagtaccagataatggaggggatgatgtactgctaagtgaagagtttattagaaactgtgtagacatgttctctgttccatcaaagggatgtgagacaaacttaagagtgttttccttgaagcatcttaatataatcgatccactaaaagagaacaacaaccttggccgtagtgtcaatagaggtagcttctatcgaatatgtagtgcttttaaatatggagctcgcaagctaggctggattctcttgttaccagcagagagaatatcagatgaacttaacaagtttttcgccaacactttggataggcatgaaagtaaatgccagactactgtgcaaaataatgccttgttggagcttggtgaagatttggacagtcattgtttgaacctgcaatatagtctgattggccagaggtgtgctacatcacctcctttattgcccagtcctcccttgtcacctcaaccatggaaagagaattcatgggatgctacctgcgaagccctacagtcccagcacaatattaattctcaaactaatgcaaatggtattccttggggaacacatgcgtatcacacaaatggtgccagttttttcattcctccattcagagaagagaagaacaaaccacgaggaacagggacgtacatccccaatgcgtcttttcagaattatcgtccctacaaggatagacacttgcctggaaggggaaggaaagaggcagctggaacttgtgctccatttcagagacacactttcaattatcctgtagcctctcaagagtcaatcgcacctggagaatgcaaccatgagctctcagaagctgagtacccaggtttaagtaatgcaaactctgcaacatcagattaccatcaacctcagctttcaatttgggagcctttccatgaaaatggtttctccaaatcccccgacaaacctgagtctagatcctcctcccctcaatcatgggaagaagtacccatgccacaactggacagtttacggttatcaggagtcgatgaagagaggattgacgagcaggcattccatctgaaggatgaagctgatttccccccgctcacccctcgactgcctttgaaggatggaatatgcattcaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_assoc

Protein Analysis

646

Amino Acids

72.57

Weight (kDa)

5.87

Isoelectric Point (pI)

44.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320
fragaria_vesca	FvH4_3g40330 FvH4_3g40330 FvH4_3g40330 FvH4_7g25750 FvH4_7g25750 FvH4_7g25750 FvH4_7g25750
malus_domestica	MD01G1165200.v1.1 MD03G1053200.v1.1 MD07G1232500.v1.1 MD11G1054900.v1.1
prunus_persica	Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.6G042500_v2.0.a1 Prupe.6G042500_v2.0.a1
pyrus_communis	pycom01g17910 pycom03g04230 pycom11g04480
rosa_chinensis	RchiOBHm_Chr1g0372011 RchiOBHm_Chr5g0072681
rosa_laevigata	RLG00000026928 RLG00000036325
rosa_multiflora	Rmu_sc0001755.1_g000036 Rmu_sc0003160.1_g000034
rosa_roxburghii	Rroxscaffold_1G00008460
rosa_rugosa	Rorug01G0367900 Rorug01G0368000 Rorug01G0368100 Rorug01G0368200 Rorug01G0368300 Rorug05G0419200 Rorug05G0419300
rosa_samantha	Rh1AG377600 Rh1BG341000 Rh1CG354200 Rh1DG372000 Rh5AG476200 Rh5BG496400 Rh5CG520200 Rh5DG508800
rosa_wichuraiana	Rw1G033220 Rw5G044220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	330
Acc36I	ACCTGC	2 cut(s)	1218, 1322
AccB1I	GGYRCC	1 cut(s)	1403
AccB7I	CCANNNNNTGG	1 cut(s)	833
AccBSI	CCGCTC	2 cut(s)	136, 1897
AccI	GTMKAC	1 cut(s)	882
AccII	CGCG	1 cut(s)	33
AciI	CCGC	5 cut(s)	31, 71, 136, 176, 1895
AclWI	GGATC	3 cut(s)	89, 953, 1761
AcoI	YGGCCR	2 cut(s)	985, 1228
AcsI	RAATTY	3 cut(s)	47, 746, 1297
AcuI	CTGAAG	4 cut(s)	392, 724, 840, 1892
AfaI	GTAC	5 cut(s)	825, 849, 1466, 1649, 1797
AfiI	CCNNNNNNNGG	5 cut(s)	712, 833, 905, 1526, 1873
AflII	CTTAAG	1 cut(s)	922
AflIII	ACRYGT	1 cut(s)	885
AjnI	CCWGG	5 cut(s)	6, 590, 1519, 1612, 1651
AloI	GAACNNNNNNTCC	2 cut(s)	1540, 1572
Alw21I	GWGCWC	4 cut(s)	625, 1045, 1558, 1635
Alw26I	GTCTC	2 cut(s)	908, 1561
AlwI	GGATC	3 cut(s)	89, 953, 1761
AlwNI	CAGNNNCTG	1 cut(s)	1643
Ama87I	CYCGRG	2 cut(s)	126, 144
AoxI	GGCC	6 cut(s)	110, 123, 138, 703, 985, 1228
ApaI	GGGCCC	1 cut(s)	127
ApeKI	GCWGC	3 cut(s)	395, 570, 1541
ApoI	RAATTY	3 cut(s)	47, 746, 1297
AseI	ATTAAT	1 cut(s)	1344
AspLEI	GCGC	2 cut(s)	35, 331
AspS9I	GGNCC	7 cut(s)	110, 123, 124, 138, 704, 715, 782
AsuC2I	CCSGG	2 cut(s)	145, 146
AsuHPI	GGTGA	5 cut(s)	176, 1193, 1239, 1269, 1891
AvaI	CYCGRG	2 cut(s)	126, 144
AvaII	GGWCC	2 cut(s)	715, 782
BaeGI	GKGCMC	1 cut(s)	127
BaeI	ACNNNNGTAYC	2 cut(s)	1373, 1406
BalI	TGGCCA	1 cut(s)	1230
BanI	GGYRCC	1 cut(s)	1403
BanII	GRGCYC	3 cut(s)	127, 1045, 1635
BauI	CACGAG	1 cut(s)	1449
Bbv12I	GWGCWC	4 cut(s)	625, 1045, 1558, 1635
BbvCI	CCTCAGC	2 cut(s)	435, 1698
BbvI	GCAGC	3 cut(s)	382, 582, 1553
BccI	CCATC	8 cut(s)	287, 429, 687, 695, 907, 1698, 1875, 1916
BceAI	ACGGC	3 cut(s)	20, 189, 972
BciT130I	CCWGG	5 cut(s)	8, 592, 1521, 1614, 1653
BclI	TGATCA	1 cut(s)	535
BcnI	CCSGG	2 cut(s)	145, 146
BcoDI	GTCTC	2 cut(s)	908, 1561
BfaI	CTAG	3 cut(s)	698, 1052, 1764
BfmI	CTRYAG	3 cut(s)	721, 1325, 1587
BfrI	CTTAAG	1 cut(s)	922
BfuAI	ACCTGC	2 cut(s)	1218, 1322
BglI	GCCNNNNNGGC	1 cut(s)	137
BisI	GCNGC	5 cut(s)	71, 177, 396, 571, 1542
BlsI	GCNGC	5 cut(s)	72, 178, 397, 572, 1543
Bme1390I	CCNGG	7 cut(s)	8, 145, 146, 592, 1521, 1614, 1653
Bme18I	GGWCC	2 cut(s)	715, 782
BmeT110I	CYCGRG	2 cut(s)	126, 144
BmgT120I	GGNCC	7 cut(s)	110, 123, 124, 138, 704, 715, 782
BmiI	GGNNCC	4 cut(s)	24, 125, 1405, 1716
BmrFI	CCNGG	7 cut(s)	8, 145, 146, 592, 1521, 1614, 1653
BmrI	ACTGGG	1 cut(s)	1257
BmsI	GCATC	3 cut(s)	421, 952, 1297
BmuI	ACTGGG	1 cut(s)	1257
BoxI	GACNNNNGTC	1 cut(s)	8
BpmI	CTGGAG	1 cut(s)	1635
Bpu10I	CCTNAGC	2 cut(s)	435, 1698
BpuEI	CTTGAG	2 cut(s)	356, 1581
BpuMI	CCSGG	2 cut(s)	145, 146
Bsa29I	ATCGAT	1 cut(s)	957
BsaBI	GATNNNNATC	2 cut(s)	420, 1689
BsaJI	CCNNGG	7 cut(s)	6, 144, 171, 982, 1286, 1373, 1651
BsaWI	WCCGGW	1 cut(s)	186
BsaXI	ACNNNNNCTCC	4 cut(s)	1234, 1264, 1540, 1570
Bsc4I	CCNNNNNNNGG	5 cut(s)	712, 833, 905, 1526, 1873
Bse118I	RCCGGY	1 cut(s)	79
Bse1I	ACTGG	6 cut(s)	87, 325, 785, 1263, 1407, 1815
Bse3DI	GCAATG	1 cut(s)	74
Bse8I	GATNNNNATC	2 cut(s)	420, 1689
BseBI	CCWGG	5 cut(s)	8, 592, 1521, 1614, 1653
BseCI	ATCGAT	1 cut(s)	957
BseDI	CCNNGG	7 cut(s)	6, 144, 171, 982, 1286, 1373, 1651
BseGI	GGATG	8 cut(s)	346, 421, 847, 914, 1312, 1467, 1882, 1927
BseJI	GATNNNNATC	2 cut(s)	420, 1689
BseLI	CCNNNNNNNGG	5 cut(s)	712, 833, 905, 1526, 1873
BseMI	GCAATG	1 cut(s)	74
BseMII	CTCAG	6 cut(s)	413, 426, 1635, 1650, 1712, 1749
BseNI	ACTGG	6 cut(s)	87, 325, 785, 1263, 1407, 1815
BseRI	GAGGAG	1 cut(s)	1762
BseSI	GKGCMC	1 cut(s)	127
BseXI	GCAGC	3 cut(s)	382, 582, 1553
BseYI	CCCAGC	1 cut(s)	1332
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	1 cut(s)	33
BshFI	GGCC	6 cut(s)	112, 125, 140, 705, 987, 1230
BshNI	GGYRCC	1 cut(s)	1403
BshVI	ATCGAT	1 cut(s)	957
BsiHKAI	GWGCWC	4 cut(s)	625, 1045, 1558, 1635
BsiHKCI	CYCGRG	2 cut(s)	126, 144
BsiSI	CCGG	6 cut(s)	20, 44, 80, 113, 145, 187
BslFI	GGGAC	4 cut(s)	75, 1315, 1474, 1482
BslI	CCNNNNNNNGG	5 cut(s)	712, 833, 905, 1526, 1873
BsmAI	GTCTC	2 cut(s)	908, 1561
BsmFI	GGGAC	4 cut(s)	75, 1315, 1474, 1482
BsmI	GAATGC	3 cut(s)	1625, 1862, 1932
BsnI	GGCC	6 cut(s)	112, 125, 140, 705, 987, 1230
BsoBI	CYCGRG	2 cut(s)	126, 144
Bsp120I	GGGCCC	1 cut(s)	123
Bsp1286I	GDGCHC	5 cut(s)	127, 625, 1045, 1558, 1635
Bsp143I	GATC	5 cut(s)	94, 535, 553, 958, 1766
Bsp19I	CCATGG	1 cut(s)	1286
BspACI	CCGC	5 cut(s)	31, 71, 136, 176, 1895
BspANI	GGCC	6 cut(s)	112, 125, 140, 705, 987, 1230
BspCNI	CTCAG	6 cut(s)	412, 427, 1636, 1649, 1711, 1750
BspDI	ATCGAT	1 cut(s)	957
BspFNI	CGCG	1 cut(s)	33
BspLI	GGNNCC	4 cut(s)	24, 125, 1405, 1716
BspMI	ACCTGC	2 cut(s)	1218, 1322
BspPI	GGATC	3 cut(s)	89, 953, 1761
BspT107I	GGYRCC	1 cut(s)	1403
BspTI	CTTAAG	1 cut(s)	922
BsrBI	CCGCTC	2 cut(s)	136, 1897
BsrDI	GCAATG	1 cut(s)	74
BsrFI	RCCGGY	1 cut(s)	79
BsrI	ACTGG	6 cut(s)	87, 325, 785, 1263, 1407, 1815
BssAI	RCCGGY	1 cut(s)	79
BssECI	CCNNGG	7 cut(s)	6, 144, 171, 982, 1286, 1373, 1651
BssMI	GATC	5 cut(s)	94, 535, 553, 958, 1766
BssSI	CACGAG	1 cut(s)	1449
BssT1I	CCWWGG	3 cut(s)	982, 1286, 1373
Bst2BI	CACGAG	1 cut(s)	1449
Bst2UI	CCWGG	5 cut(s)	8, 592, 1521, 1614, 1653
Bst4CI	ACNGT	9 cut(s)	156, 313, 715, 878, 1153, 1196, 1329, 1817, 1824
Bst6I	CTCTTC	4 cut(s)	375, 855, 1428, 1836
BstAFI	CTTAAG	1 cut(s)	922
BstAPI	GCANNNNNTGC	1 cut(s)	1673
BstC8I	GCNNGC	5 cut(s)	81, 138, 1045, 1049, 1860
BstDEI	CTNAG	7 cut(s)	399, 435, 854, 1636, 1644, 1698, 1758
BstDSI	CCRYGG	2 cut(s)	171, 1286
BstF5I	GGATG	8 cut(s)	346, 421, 847, 914, 1312, 1467, 1882, 1927
BstFNI	CGCG	1 cut(s)	33
BstHHI	GCGC	2 cut(s)	35, 331
BstKTI	GATC	5 cut(s)	97, 538, 556, 961, 1769
BstMAI	GTCTC	2 cut(s)	908, 1561
BstMBI	GATC	5 cut(s)	94, 535, 553, 958, 1766
BstMWI	GCNNNNNNNGC	4 cut(s)	76, 137, 1053, 1673
BstNI	CCWGG	5 cut(s)	8, 592, 1521, 1614, 1653
BstNSI	RCATGY	2 cut(s)	889, 1388
BstPAI	GACNNNNGTC	1 cut(s)	8
BstSCI	CCNGG	7 cut(s)	6, 143, 144, 590, 1519, 1612, 1651
BstSFI	CTRYAG	3 cut(s)	721, 1325, 1587
BstSLI	GKGCMC	1 cut(s)	127
BstUI	CGCG	1 cut(s)	33
BstV1I	GCAGC	3 cut(s)	382, 582, 1553
BstX2I	RGATCY	1 cut(s)	1766
BstXI	CCANNNNNNTGG	2 cut(s)	1120, 1730
BstYI	RGATCY	1 cut(s)	1766
Bsu15I	ATCGAT	1 cut(s)	957
BsuRI	GGCC	6 cut(s)	112, 125, 140, 705, 987, 1230
BsuTUI	ATCGAT	1 cut(s)	957
BtgI	CCRYGG	2 cut(s)	171, 1286
BtgZI	GCGATG	1 cut(s)	407
BtsCI	GGATG	8 cut(s)	346, 421, 847, 914, 1312, 1467, 1882, 1927
BtsI	GCAGTG	1 cut(s)	331
BtsIMutI	CAGTG	2 cut(s)	318, 331
BveI	ACCTGC	2 cut(s)	1218, 1322
Cac8I	GCNNGC	5 cut(s)	81, 138, 1045, 1049, 1860
CaiI	CAGNNNCTG	1 cut(s)	1643
CfoI	GCGC	2 cut(s)	35, 331
Cfr10I	RCCGGY	1 cut(s)	79
Cfr13I	GGNCC	7 cut(s)	110, 123, 124, 138, 704, 715, 782
Cfr9I	CCCGGG	1 cut(s)	144
ClaI	ATCGAT	1 cut(s)	957
CseI	GACGC	1 cut(s)	1467
Csp6I	GTAC	5 cut(s)	824, 848, 1465, 1648, 1796
CviQI	GTAC	5 cut(s)	824, 848, 1465, 1648, 1796
DdeI	CTNAG	7 cut(s)	399, 435, 854, 1636, 1644, 1698, 1758
DpnI	GATC	5 cut(s)	96, 537, 555, 960, 1768
DpnII	GATC	5 cut(s)	94, 535, 553, 958, 1766
DraI	TTTAAA	2 cut(s)	777, 1033
EaeI	YGGCCR	2 cut(s)	985, 1228
Eam1104I	CTCTTC	4 cut(s)	375, 855, 1428, 1836
EarI	CTCTTC	4 cut(s)	375, 855, 1428, 1836
Ecl136II	GAGCTC	2 cut(s)	1043, 1633
Eco130I	CCWWGG	3 cut(s)	982, 1286, 1373
Eco24I	GRGCYC	3 cut(s)	127, 1045, 1635
Eco32I	GATATC	1 cut(s)	202
Eco47I	GGWCC	2 cut(s)	715, 782
Eco53kI	GAGCTC	2 cut(s)	1043, 1633
Eco57I	CTGAAG	4 cut(s)	392, 724, 840, 1892
Eco88I	CYCGRG	2 cut(s)	126, 144
EcoICRI	GAGCTC	2 cut(s)	1043, 1633
EcoRI	GAATTC	1 cut(s)	1297
EcoRII	CCWGG	5 cut(s)	6, 590, 1519, 1612, 1651
EcoRV	GATATC	1 cut(s)	202
EcoT14I	CCWWGG	3 cut(s)	982, 1286, 1373
EcoT22I	ATGCAT	2 cut(s)	458, 1934
EcoT38I	GRGCYC	3 cut(s)	127, 1045, 1635
ErhI	CCWWGG	3 cut(s)	982, 1286, 1373
FaqI	GGGAC	4 cut(s)	75, 1315, 1474, 1482
FauI	CCCGC	2 cut(s)	129, 1902
FauNDI	CATATG	1 cut(s)	646
FbaI	TGATCA	1 cut(s)	535
FblI	GTMKAC	1 cut(s)	882
Fnu4HI	GCNGC	5 cut(s)	71, 177, 396, 571, 1542
FokI	GGATG	8 cut(s)	353, 428, 854, 921, 1319, 1454, 1889, 1934
FriOI	GRGCYC	3 cut(s)	127, 1045, 1635
Fsp4HI	GCNGC	5 cut(s)	71, 177, 396, 571, 1542
FspAI	RTGCGCAY	1 cut(s)	330
FspBI	CTAG	3 cut(s)	698, 1052, 1764
FspI	TGCGCA	1 cut(s)	330
GlaI	GCGC	2 cut(s)	34, 330
GluI	GCNGC	5 cut(s)	71, 177, 396, 571, 1542
GsaI	CCCAGC	1 cut(s)	1336
GsuI	CTGGAG	1 cut(s)	1635
HaeIII	GGCC	6 cut(s)	112, 125, 140, 705, 987, 1230
HapII	CCGG	6 cut(s)	20, 44, 80, 113, 145, 187
HgaI	GACGC	1 cut(s)	1467
HhaI	GCGC	2 cut(s)	35, 331
Hin6I	GCGC	2 cut(s)	33, 329
HinP1I	GCGC	2 cut(s)	33, 329
HinfI	GANTC	8 cut(s)	116, 163, 181, 607, 1060, 1601, 1760, 1833
HpaII	CCGG	6 cut(s)	20, 44, 80, 113, 145, 187
HphI	GGTGA	5 cut(s)	176, 1193, 1239, 1269, 1891
Hpy166II	GTNNAC	2 cut(s)	883, 1820
Hpy188III	TCNNGA	7 cut(s)	92, 290, 524, 698, 1598, 1764, 1830
Hpy8I	GTNNAC	2 cut(s)	883, 1820
Hpy99I	CGWCG	1 cut(s)	103
HpyAV	CCTTC	9 cut(s)	186, 190, 367, 406, 496, 1518, 1524, 1867, 1912
HpyCH4III	ACNGT	9 cut(s)	156, 313, 715, 878, 1153, 1196, 1329, 1817, 1824
HpyCH4IV	ACGT	2 cut(s)	237, 1463
HpyF10VI	GCNNNNNNNGC	4 cut(s)	76, 137, 1053, 1673
HpyF3I	CTNAG	7 cut(s)	399, 435, 854, 1636, 1644, 1698, 1758
HpySE526I	ACGT	2 cut(s)	237, 1463
HspAI	GCGC	2 cut(s)	33, 329
KroI	GCCGGC	1 cut(s)	79
KroNI	GCCGGC	1 cut(s)	81
Ksp22I	TGATCA	1 cut(s)	535
Kzo9I	GATC	5 cut(s)	94, 535, 553, 958, 1766
LmnI	GCTCC	5 cut(s)	22, 1040, 1174, 1561, 1714
Lsp1109I	GCAGC	3 cut(s)	382, 582, 1553
LweI	GCATC	3 cut(s)	421, 952, 1297
MaeI	CTAG	3 cut(s)	698, 1052, 1764
MaeII	ACGT	2 cut(s)	237, 1463
MaeIII	GTNAC	4 cut(s)	233, 349, 1068, 1275
MalI	GATC	5 cut(s)	96, 537, 555, 960, 1768
MbiI	CCGCTC	2 cut(s)	136, 1897
MboI	GATC	5 cut(s)	94, 535, 553, 958, 1766
MboII	GAAGA	9 cut(s)	278, 392, 684, 872, 1196, 1445, 1450, 1802, 1853
MfeI	CAATTG	1 cut(s)	105
MflI	RGATCY	1 cut(s)	1766
MhlI	GDGCHC	5 cut(s)	127, 625, 1045, 1558, 1635
MlsI	TGGCCA	1 cut(s)	1230
MluCI	AATT	9 cut(s)	47, 105, 636, 746, 1297, 1345, 1489, 1579, 1707
MluNI	TGGCCA	1 cut(s)	1230
MlyI	GAGTC	6 cut(s)	125, 175, 616, 1610, 1769, 1842
MmeI	TCCRAC	1 cut(s)	1152
Mox20I	TGGCCA	1 cut(s)	1230
Mph1103I	ATGCAT	2 cut(s)	458, 1934
MroNI	GCCGGC	1 cut(s)	79
MscI	TGGCCA	1 cut(s)	1230
MslI	CAYNNNNRTG	3 cut(s)	360, 1398, 1728
Msp20I	TGGCCA	1 cut(s)	1230
MspA1I	CMGCKG	1 cut(s)	1544
MspCI	CTTAAG	1 cut(s)	922
MspI	CCGG	6 cut(s)	20, 44, 80, 113, 145, 187
MspR9I	CCNGG	7 cut(s)	8, 145, 146, 592, 1521, 1614, 1653
MunI	CAATTG	1 cut(s)	105
Mva1269I	GAATGC	3 cut(s)	1625, 1862, 1932
MvaI	CCWGG	5 cut(s)	8, 592, 1521, 1614, 1653
MvnI	CGCG	1 cut(s)	33
MwoI	GCNNNNNNNGC	4 cut(s)	76, 137, 1053, 1673
NaeI	GCCGGC	1 cut(s)	81
NciI	CCSGG	2 cut(s)	145, 146
NcoI	CCATGG	1 cut(s)	1286
NdeI	CATATG	1 cut(s)	646
NdeII	GATC	5 cut(s)	94, 535, 553, 958, 1766
NgoMIV	GCCGGC	1 cut(s)	79
NlaIV	GGNNCC	4 cut(s)	24, 125, 1405, 1716
NmeAIII	GCCGAG	1 cut(s)	157
NmuCI	GTSAC	1 cut(s)	1275
NsbI	TGCGCA	1 cut(s)	330
NsiI	ATGCAT	2 cut(s)	458, 1934
NspI	RCATGY	2 cut(s)	889, 1388
PciI	ACATGT	1 cut(s)	885
PcsI	WCGNNNNNNNCGW	1 cut(s)	23
PctI	GAATGC	3 cut(s)	1625, 1862, 1932
PdiI	GCCGGC	1 cut(s)	81
PfeI	GAWTC	2 cut(s)	163, 1060
PflMI	CCANNNNNTGG	1 cut(s)	833
PkrI	GCNGC	5 cut(s)	72, 178, 397, 572, 1543
PleI	GAGTC	6 cut(s)	124, 175, 615, 1609, 1768, 1841
PpsI	GAGTC	6 cut(s)	124, 175, 615, 1609, 1768, 1841
PscI	ACATGT	1 cut(s)	885
PshAI	GACNNNNGTC	1 cut(s)	8
PshBI	ATTAAT	1 cut(s)	1344
Psp124BI	GAGCTC	2 cut(s)	1045, 1635
Psp6I	CCWGG	5 cut(s)	6, 590, 1519, 1612, 1651
PspFI	CCCAGC	1 cut(s)	1332
PspGI	CCWGG	5 cut(s)	6, 590, 1519, 1612, 1651
PspN4I	GGNNCC	4 cut(s)	24, 125, 1405, 1716
PspOMI	GGGCCC	1 cut(s)	123
PspPI	GGNCC	7 cut(s)	110, 123, 124, 138, 704, 715, 782
PsrI	GAACNNNNNNTAC	2 cut(s)	342, 374
PstNI	CAGNNNCTG	1 cut(s)	1643
PsuI	RGATCY	1 cut(s)	1766
PvuII	CAGCTG	1 cut(s)	1544
RsaI	GTAC	5 cut(s)	825, 849, 1466, 1649, 1797
RsaNI	GTAC	5 cut(s)	824, 848, 1465, 1648, 1796
RseI	CAYNNNNRTG	3 cut(s)	360, 1398, 1728
SacI	GAGCTC	2 cut(s)	1045, 1635
SatI	GCNGC	5 cut(s)	71, 177, 396, 571, 1542
Sau3AI	GATC	5 cut(s)	94, 535, 553, 958, 1766
Sau96I	GGNCC	7 cut(s)	110, 123, 124, 138, 704, 715, 782
SchI	GAGTC	6 cut(s)	125, 175, 616, 1610, 1769, 1842
ScrFI	CCNGG	7 cut(s)	8, 145, 146, 592, 1521, 1614, 1653
SduI	GDGCHC	5 cut(s)	127, 625, 1045, 1558, 1635
SfaNI	GCATC	3 cut(s)	421, 952, 1297
SfcI	CTRYAG	3 cut(s)	721, 1325, 1587
SinI	GGWCC	2 cut(s)	715, 782
SmaI	CCCGGG	1 cut(s)	146
SmiMI	CAYNNNNRTG	3 cut(s)	360, 1398, 1728
SmlI	CTYRAG	3 cut(s)	335, 922, 1596
SmoI	CTYRAG	3 cut(s)	335, 922, 1596
Sse9I	AATT	9 cut(s)	47, 105, 636, 746, 1297, 1345, 1489, 1579, 1707
SsiI	CCGC	5 cut(s)	31, 71, 136, 176, 1895
SspI	AATATT	2 cut(s)	764, 1342
SspMI	CTAG	3 cut(s)	698, 1052, 1764
SstI	GAGCTC	2 cut(s)	1045, 1635
StyD4I	CCNGG	7 cut(s)	6, 143, 144, 590, 1519, 1612, 1651
StyI	CCWWGG	3 cut(s)	982, 1286, 1373
TaaI	ACNGT	9 cut(s)	156, 313, 715, 878, 1153, 1196, 1329, 1817, 1824
TaiI	ACGT	2 cut(s)	240, 1466
TaqI	TCGA	4 cut(s)	957, 1015, 1836, 1906
TasI	AATT	9 cut(s)	47, 105, 636, 746, 1297, 1345, 1489, 1579, 1707
TatI	WGTACW	1 cut(s)	847
TauI	GCSGC	2 cut(s)	73, 179
TfiI	GAWTC	2 cut(s)	163, 1060
TscAI	CASTG	2 cut(s)	325, 331
TseFI	GTSAC	1 cut(s)	1275
TseI	GCWGC	3 cut(s)	395, 570, 1541
Tsp45I	GTSAC	1 cut(s)	1275
TspGWI	ACGGA	1 cut(s)	87
TspMI	CCCGGG	1 cut(s)	144
TspRI	CASTG	2 cut(s)	325, 331
Van91I	CCANNNNNTGG	1 cut(s)	833
Vha464I	CTTAAG	1 cut(s)	922
VpaK11BI	GGWCC	2 cut(s)	715, 782
VspI	ATTAAT	1 cut(s)	1344
XapI	RAATTY	3 cut(s)	47, 746, 1297
XbaI	TCTAGA	2 cut(s)	697, 1763
XceI	RCATGY	2 cut(s)	889, 1388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1807
XmaI	CCCGGG	1 cut(s)	144
XmiI	GTMKAC	1 cut(s)	882
XspI	CTAG	3 cut(s)	698, 1052, 1764
Zsp2I	ATGCAT	2 cut(s)	458, 1934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.