Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001135

Physical Location & Seq

Genomic Coordinates Forward (+)

47461833 .. 47472047

Gene Structure 10215 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG341000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGTGTTGTCCTTTGGCTCAGTTCCATTAAAAACGTATCTCCCTGATGGAGATATTGATTTGACAGTACTCTGTCATCGGAACCAGGAGGAAGACTTAGCTAGGGCTGTCTGCAGTCGCCTTCAAGGTGAACCAAAGGAACCTGGGTTTCTGGTTGAAGATGTTAGATACGTTTATGCAAAGGTGGACCAGGTCGTTGGAAGAGACCACCTTTTTAAAAAGAGTATTATCTTGATCAAAGCTTGGTGCTATTATGAGAGCCGAACTGTTGGTGCACCCCATGGCTTGATTTCAACATATGCCCTAGAAACACTGGTCTTGTATATCATCAATCTCTTTCATTCATCACTCCATGGACCTCTACAGGTTCTTCATATATTTTTGGAATACTATAGCAAATTTGATTGGACAAATTATTGCATCAGTATAAATGGTCCGGTTTCCTTATCATCCGTTCTTAAAATCAGAGAGACACCAGAAAATGAGGGGGATAATTTACTGTTCACCAAGGAATTTTTGAAGAAATGTAGAGTTGCATTTTCAGATGCAAGAAGAATCAGCGAAGCTAGACTGCAGGAATTCCCAATCAAGTGCTTCAACGTAGTGGATCCTCTAAAAGACAACAACAATCTAGGCCGTAGTGTTACTTCAGGAAACTTCGCTCGCATTAAATCTGCTTTTGCATTTGGAGAAAATGAGCTCCGGAGAATTCTAGCGGTACCGGGTGAAAGCATTGGCCAAAAACTTCAAAAAGATTTTTTTCCTGTCACTTTAAATAGGAATGGGAGGGGACAAAGACCAGATTTGCAAGCTCCTGTACCAGCATTTGGTAGTGGAAGATATGTACAATCTAACCTCACTGGGGACTTTGATTATTATTATGGAGGAATATTGTATGCGCAGTGGCTTCATGATGAAAGTTTACATCTTTCTTCACACCCAAGTCCGCCACCTTCTCAAGTCCAGAATAACACCACATGGAATGCCAGGACTTGGTCAGTGAATGTCTTTGATCCAATGTCAATGAATGCACATGCATTACCTTTCTATCATCACTGTGCTTCCCAACAGACTGCTCATATAAGGACATTGCCAGGAACTGGCATGTACATACCTGATCCGAGTCCTCATTACAGACAGATGTATTCAAGGGCGAGGGGAAGGAACGAGTCTAAAAATCGTCGGGTGATGATGAAACCACCCCAAAAGGTTAACCAGTCAGAAACAAGTACTGGTGTACATGTAAGCAGCATTGATCTTTCACTTGAGGAAGTTCCACATCTTCCAGGCATTCAACCGCCCCCACCTCCACAAGTCTCTCAATCTGGTAAGCCCTGGCCATCTCTTCAATCCCAGGTGCCCCCTCAGACCAATGAGGATCATAAGCTTGGGGTTTTGGGGCCTGGATCATTGCCTTTGGGAATGCATTCACTTGAAGCAAAGGCAGATTCTTGTAGTTCATATGCTAGCACCGAAGGTCCCTGTAATGGGAATGCCAAGTCAACAAGTACGTTCAAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTP_transf_2 PAP_assoc

Protein Analysis

507

Amino Acids

56.71

Weight (kDa)

8.44

Isoelectric Point (pI)

50.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAP-OAS1	PF26180	66 - 257	4.8e-84	PAP/OAS1 substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT2G40520 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320 AT3G56320
fragaria_vesca	FvH4_3g40330 FvH4_3g40330 FvH4_3g40330 FvH4_7g25750 FvH4_7g25750 FvH4_7g25750 FvH4_7g25750
malus_domestica	MD01G1165200.v1.1 MD03G1053200.v1.1 MD07G1232500.v1.1 MD11G1054900.v1.1
prunus_persica	Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.2G262700_v2.0.a1 Prupe.6G042500_v2.0.a1 Prupe.6G042500_v2.0.a1
pyrus_communis	pycom01g17910 pycom03g04230 pycom11g04480
rosa_chinensis	RchiOBHm_Chr1g0372011 RchiOBHm_Chr5g0072681
rosa_laevigata	RLG00000026928 RLG00000036325
rosa_multiflora	Rmu_sc0001755.1_g000036 Rmu_sc0003160.1_g000034
rosa_roxburghii	Rroxscaffold_1G00008460
rosa_rugosa	Rorug01G0367900 Rorug01G0368000 Rorug01G0368100 Rorug01G0368200 Rorug01G0368300 Rorug05G0419200 Rorug05G0419300
rosa_samantha	Rh1AG377600 Rh1BG341000 Rh1CG354200 Rh1DG372000 Rh5AG476200 Rh5BG496400 Rh5CG520200 Rh5DG508800
rosa_wichuraiana	Rw1G033220 Rw5G044220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	900
Acc65I	GGTACC	1 cut(s)	718
AccB1I	GGYRCC	2 cut(s)	718, 1357
AccB7I	CCANNNNNTGG	3 cut(s)	827, 993, 1100
AccIII	TCCGGA	1 cut(s)	702
AciI	CCGC	3 cut(s)	716, 947, 1298
AclWI	GGATC	6 cut(s)	602, 615, 1007, 1112, 1386, 1414
AcoI	YGGCCR	2 cut(s)	736, 1337
AcsI	RAATTY	4 cut(s)	398, 512, 578, 708
AcuI	CTGAAG	1 cut(s)	633
AfaI	GTAC	8 cut(s)	69, 720, 819, 846, 1109, 1231, 1239, 1510
AfiI	CCNNNNNNNGG	6 cut(s)	827, 862, 993, 1100, 1487, 1488
AflIII	ACRYGT	1 cut(s)	1240
AjnI	CCWGG	9 cut(s)	84, 142, 189, 986, 1093, 1285, 1334, 1353, 1402
AluBI	AGCT	6 cut(s)	101, 242, 566, 700, 812, 1387
AluI	AGCT	6 cut(s)	101, 242, 566, 700, 812, 1387
Alw21I	GWGCWC	2 cut(s)	277, 702
Alw26I	GTCTC	3 cut(s)	198, 464, 1321
Alw44I	GTGCAC	1 cut(s)	273
AlwI	GGATC	6 cut(s)	602, 615, 1007, 1112, 1386, 1414
AlwNI	CAGNNNCTG	1 cut(s)	1100
Aor13HI	TCCGGA	1 cut(s)	702
AoxI	GGCC	4 cut(s)	634, 736, 1337, 1400
ApaLI	GTGCAC	1 cut(s)	273
ApeKI	GCWGC	1 cut(s)	1248
ApoI	RAATTY	4 cut(s)	398, 512, 578, 708
Asp700I	GAANNNNTTC	1 cut(s)	1426
Asp718I	GGTACC	1 cut(s)	718
AspLEI	GCGC	1 cut(s)	901
AspS9I	GGNCC	5 cut(s)	187, 356, 434, 1400, 1478
AsuC2I	CCSGG	1 cut(s)	723
AsuHPI	GGTGA	4 cut(s)	140, 496, 737, 1198
AsuNHI	GCTAGC	1 cut(s)	1466
AvaII	GGWCC	4 cut(s)	187, 356, 434, 1478
BaeGI	GKGCMC	2 cut(s)	277, 1362
BalI	TGGCCA	2 cut(s)	738, 1339
BamHI	GGATCC	1 cut(s)	607
BanI	GGYRCC	2 cut(s)	718, 1357
BanII	GRGCYC	1 cut(s)	702
BarI	GAAGNNNNNNTAC	2 cut(s)	631, 663
BbsI	GAAGAC	1 cut(s)	99
Bbv12I	GWGCWC	2 cut(s)	277, 702
BbvI	GCAGC	1 cut(s)	1260
BccI	CCATC	2 cut(s)	41, 1348
BceAI	ACGGC	1 cut(s)	621
BciT130I	CCWGG	9 cut(s)	86, 144, 191, 988, 1095, 1287, 1336, 1355, 1404
BclI	TGATCA	1 cut(s)	234
BcnI	CCSGG	1 cut(s)	723
BcoDI	GTCTC	3 cut(s)	198, 464, 1321
BfaI	CTAG	6 cut(s)	102, 305, 567, 632, 713, 1467
BfmI	CTRYAG	4 cut(s)	112, 362, 391, 572
BisI	GCNGC	1 cut(s)	1249
BlsI	GCNGC	1 cut(s)	1250
BmcAI	AGTACT	2 cut(s)	69, 1231
Bme18I	GGWCC	4 cut(s)	187, 356, 434, 1478
BmgT120I	GGNCC	5 cut(s)	187, 356, 434, 1400, 1478
BmiI	GGNNCC	7 cut(s)	83, 141, 609, 720, 1359, 1401, 1480
BmrI	ACTGGG	1 cut(s)	870
BmsI	GCATC	2 cut(s)	429, 535
BmtI	GCTAGC	1 cut(s)	1470
BmuI	ACTGGG	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	99
BpuEI	CTTGAG	2 cut(s)	942, 1286
BpuMI	CCSGG	1 cut(s)	723
BsaI	GGTCTC	1 cut(s)	198
BsaJI	CCNNGG	6 cut(s)	143, 280, 352, 507, 1334, 1353
BsaWI	WCCGGW	2 cut(s)	436, 702
Bsc4I	CCNNNNNNNGG	6 cut(s)	827, 862, 993, 1100, 1487, 1488
Bse1I	ACTGG	5 cut(s)	318, 865, 1105, 1216, 1237
Bse3DI	GCAATG	2 cut(s)	1088, 1409
BseAI	TCCGGA	1 cut(s)	702
BseBI	CCWGG	9 cut(s)	86, 144, 191, 988, 1095, 1287, 1336, 1355, 1404
BseDI	CCNNGG	6 cut(s)	143, 280, 352, 507, 1334, 1353
BseGI	GGATG	1 cut(s)	449
BseLI	CCNNNNNNNGG	6 cut(s)	827, 862, 993, 1100, 1487, 1488
BseMI	GCAATG	2 cut(s)	1088, 1409
BseMII	CTCAG	2 cut(s)	33, 1379
BseNI	ACTGG	5 cut(s)	318, 865, 1105, 1216, 1237
BseSI	GKGCMC	2 cut(s)	277, 1362
BseXI	GCAGC	1 cut(s)	1260
BshFI	GGCC	4 cut(s)	636, 738, 1339, 1402
BshNI	GGYRCC	2 cut(s)	718, 1357
BsiHKAI	GWGCWC	2 cut(s)	277, 702
BsiSI	CCGG	3 cut(s)	437, 703, 722
BslFI	GGGAC	3 cut(s)	804, 878, 1464
BslI	CCNNNNNNNGG	6 cut(s)	827, 862, 993, 1100, 1487, 1488
BsmAI	GTCTC	3 cut(s)	198, 464, 1321
BsmFI	GGGAC	3 cut(s)	804, 878, 1464
BsmI	GAATGC	6 cut(s)	988, 1033, 1290, 1426, 1428, 1498
BsnI	GGCC	4 cut(s)	636, 738, 1339, 1402
Bso31I	GGTCTC	1 cut(s)	198
Bsp1286I	GDGCHC	3 cut(s)	277, 702, 1362
Bsp13I	TCCGGA	1 cut(s)	702
Bsp1407I	TGTACA	3 cut(s)	844, 1107, 1237
Bsp143I	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
Bsp19I	CCATGG	2 cut(s)	280, 352
BspACI	CCGC	3 cut(s)	716, 947, 1298
BspANI	GGCC	4 cut(s)	636, 738, 1339, 1402
BspCNI	CTCAG	2 cut(s)	32, 1378
BspEI	TCCGGA	1 cut(s)	702
BspHI	TCATGA	1 cut(s)	910
BspLI	GGNNCC	7 cut(s)	83, 141, 609, 720, 1359, 1401, 1480
BspMAI	CTGCAG	2 cut(s)	116, 576
BspOI	GCTAGC	1 cut(s)	1470
BspPI	GGATC	6 cut(s)	602, 615, 1007, 1112, 1386, 1414
BspT107I	GGYRCC	2 cut(s)	718, 1357
BspTNI	GGTCTC	1 cut(s)	198
BsrDI	GCAATG	2 cut(s)	1088, 1409
BsrGI	TGTACA	3 cut(s)	844, 1107, 1237
BsrI	ACTGG	5 cut(s)	318, 865, 1105, 1216, 1237
BssECI	CCNNGG	6 cut(s)	143, 280, 352, 507, 1334, 1353
BssMI	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
BssT1I	CCWWGG	3 cut(s)	280, 352, 507
Bst2UI	CCWGG	9 cut(s)	86, 144, 191, 988, 1095, 1287, 1336, 1355, 1404
Bst4CI	ACNGT	4 cut(s)	67, 268, 501, 1058
Bst6I	CTCTTC	2 cut(s)	196, 1350
BstAUI	TGTACA	3 cut(s)	844, 1107, 1237
BstC8I	GCNNGC	3 cut(s)	664, 810, 1468
BstDEI	CTNAG	3 cut(s)	19, 97, 1365
BstDSI	CCRYGG	2 cut(s)	280, 352
BstF5I	GGATG	1 cut(s)	449
BstHHI	GCGC	1 cut(s)	901
BstKTI	GATC	7 cut(s)	237, 610, 1015, 1120, 1258, 1381, 1409
BstMAI	GTCTC	3 cut(s)	198, 464, 1321
BstMBI	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
BstNI	CCWGG	9 cut(s)	86, 144, 191, 988, 1095, 1287, 1336, 1355, 1404
BstNSI	RCATGY	3 cut(s)	1037, 1108, 1244
BstSFI	CTRYAG	4 cut(s)	112, 362, 391, 572
BstSLI	GKGCMC	2 cut(s)	277, 1362
BstV1I	GCAGC	1 cut(s)	1260
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	1 cut(s)	607
BstXI	CCANNNNNNTGG	1 cut(s)	197
BstYI	RGATCY	1 cut(s)	607
BsuRI	GGCC	4 cut(s)	636, 738, 1339, 1402
BtgI	CCRYGG	2 cut(s)	280, 352
BtsCI	GGATG	1 cut(s)	449
BtsI	GCAGTG	1 cut(s)	908
BtsIMutI	CAGTG	5 cut(s)	311, 858, 908, 1005, 1054
Cac8I	GCNNGC	3 cut(s)	664, 810, 1468
CaiI	CAGNNNCTG	1 cut(s)	1100
CciI	TCATGA	1 cut(s)	910
CfoI	GCGC	1 cut(s)	901
Cfr13I	GGNCC	5 cut(s)	187, 356, 434, 1400, 1478
CsiI	ACCWGGT	1 cut(s)	189
Csp6I	GTAC	8 cut(s)	68, 719, 818, 845, 1108, 1230, 1238, 1509
CviAII	CATG	7 cut(s)	281, 353, 911, 978, 1034, 1105, 1241
CviQI	GTAC	8 cut(s)	68, 719, 818, 845, 1108, 1230, 1238, 1509
DdeI	CTNAG	3 cut(s)	19, 97, 1365
DpnI	GATC	7 cut(s)	236, 609, 1014, 1119, 1257, 1380, 1408
DpnII	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
DraI	TTTAAA	2 cut(s)	217, 774
EaeI	YGGCCR	2 cut(s)	736, 1337
Eam1104I	CTCTTC	2 cut(s)	196, 1350
EarI	CTCTTC	2 cut(s)	196, 1350
EciI	GGCGGA	1 cut(s)	936
Ecl136II	GAGCTC	1 cut(s)	700
Eco130I	CCWWGG	3 cut(s)	280, 352, 507
Eco24I	GRGCYC	1 cut(s)	702
Eco31I	GGTCTC	1 cut(s)	198
Eco47I	GGWCC	4 cut(s)	187, 356, 434, 1478
Eco53kI	GAGCTC	1 cut(s)	700
Eco57I	CTGAAG	1 cut(s)	633
EcoICRI	GAGCTC	1 cut(s)	700
EcoO109I	RGGNCCY	2 cut(s)	1400, 1478
EcoRI	GAATTC	2 cut(s)	578, 708
EcoRII	CCWGG	9 cut(s)	84, 142, 189, 986, 1093, 1285, 1334, 1353, 1402
EcoT14I	CCWWGG	3 cut(s)	280, 352, 507
EcoT22I	ATGCAT	2 cut(s)	1039, 1428
EcoT38I	GRGCYC	1 cut(s)	702
ErhI	CCWWGG	3 cut(s)	280, 352, 507
FaeI	CATG	7 cut(s)	284, 356, 914, 981, 1037, 1108, 1244
FaqI	GGGAC	3 cut(s)	804, 878, 1464
FatI	CATG	7 cut(s)	280, 352, 910, 977, 1033, 1104, 1240
FauNDI	CATATG	2 cut(s)	298, 1462
FbaI	TGATCA	1 cut(s)	234
Fnu4HI	GCNGC	1 cut(s)	1249
FokI	GGATG	1 cut(s)	436
FriOI	GRGCYC	1 cut(s)	702
Fsp4HI	GCNGC	1 cut(s)	1249
FspBI	CTAG	6 cut(s)	102, 305, 567, 632, 713, 1467
FspI	TGCGCA	1 cut(s)	900
GlaI	GCGC	1 cut(s)	900
GluI	GCNGC	1 cut(s)	1249
HaeIII	GGCC	4 cut(s)	636, 738, 1339, 1402
HapII	CCGG	3 cut(s)	437, 703, 722
HhaI	GCGC	1 cut(s)	901
Hin1II	CATG	7 cut(s)	284, 356, 914, 981, 1037, 1108, 1244
Hin6I	GCGC	1 cut(s)	899
HinP1I	GCGC	1 cut(s)	899
HincII	GTYRAC	2 cut(s)	1213, 1503
HindII	GTYRAC	2 cut(s)	1213, 1503
HindIII	AAGCTT	2 cut(s)	240, 1385
HinfI	GANTC	4 cut(s)	555, 1123, 1169, 1448
HpaI	GTTAAC	1 cut(s)	1213
HpaII	CCGG	3 cut(s)	437, 703, 722
HphI	GGTGA	4 cut(s)	140, 496, 737, 1198
Hpy166II	GTNNAC	8 cut(s)	131, 187, 275, 504, 923, 1213, 1238, 1503
Hpy188I	TCNGA	6 cut(s)	81, 467, 544, 1122, 1222, 1368
Hpy188III	TCNNGA	5 cut(s)	232, 651, 703, 911, 964
Hpy8I	GTNNAC	8 cut(s)	131, 187, 275, 504, 923, 1213, 1238, 1503
Hpy99I	CGWCG	1 cut(s)	1185
HpyAV	CCTTC	4 cut(s)	131, 963, 1155, 1469
HpyCH4III	ACNGT	4 cut(s)	67, 268, 501, 1058
HpyCH4IV	ACGT	4 cut(s)	35, 171, 600, 1511
HpyF3I	CTNAG	3 cut(s)	19, 97, 1365
HpySE526I	ACGT	4 cut(s)	35, 171, 600, 1511
Hsp92II	CATG	7 cut(s)	284, 356, 914, 981, 1037, 1108, 1244
HspAI	GCGC	1 cut(s)	899
Kpn2I	TCCGGA	1 cut(s)	702
KpnI	GGTACC	1 cut(s)	722
Ksp22I	TGATCA	1 cut(s)	234
KspAI	GTTAAC	1 cut(s)	1213
Kzo9I	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
LmnI	GCTCC	2 cut(s)	705, 817
Lsp1109I	GCAGC	1 cut(s)	1260
LweI	GCATC	2 cut(s)	429, 535
MabI	ACCWGGT	1 cut(s)	189
MaeI	CTAG	6 cut(s)	102, 305, 567, 632, 713, 1467
MaeII	ACGT	4 cut(s)	35, 171, 600, 1511
MaeIII	GTNAC	2 cut(s)	643, 766
MalI	GATC	7 cut(s)	236, 609, 1014, 1119, 1257, 1380, 1408
MboI	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
MflI	RGATCY	1 cut(s)	607
MhlI	GDGCHC	3 cut(s)	277, 702, 1362
MlsI	TGGCCA	2 cut(s)	738, 1339
MluCI	AATT	6 cut(s)	398, 412, 493, 512, 578, 708
MluNI	TGGCCA	2 cut(s)	738, 1339
MlyI	GAGTC	2 cut(s)	1132, 1178
MmeI	TCCRAC	1 cut(s)	178
Mox20I	TGGCCA	2 cut(s)	738, 1339
Mph1103I	ATGCAT	2 cut(s)	1039, 1428
MroI	TCCGGA	1 cut(s)	702
MroXI	GAANNNNTTC	1 cut(s)	1426
MscI	TGGCCA	2 cut(s)	738, 1339
MseI	TTAA	6 cut(s)	29, 216, 459, 669, 773, 1212
MslI	CAYNNNNRTG	1 cut(s)	1056
Msp20I	TGGCCA	2 cut(s)	738, 1339
MspI	CCGG	3 cut(s)	437, 703, 722
Mva1269I	GAATGC	6 cut(s)	988, 1033, 1290, 1426, 1428, 1498
MvaI	CCWGG	9 cut(s)	86, 144, 191, 988, 1095, 1287, 1336, 1355, 1404
NciI	CCSGG	1 cut(s)	723
NcoI	CCATGG	2 cut(s)	280, 352
NdeI	CATATG	2 cut(s)	298, 1462
NdeII	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
NheI	GCTAGC	1 cut(s)	1466
NlaIII	CATG	7 cut(s)	284, 356, 914, 981, 1037, 1108, 1244
NlaIV	GGNNCC	7 cut(s)	83, 141, 609, 720, 1359, 1401, 1480
NmuCI	GTSAC	1 cut(s)	766
NsbI	TGCGCA	1 cut(s)	900
NsiI	ATGCAT	2 cut(s)	1039, 1428
NspI	RCATGY	3 cut(s)	1037, 1108, 1244
PagI	TCATGA	1 cut(s)	910
PciI	ACATGT	1 cut(s)	1240
PctI	GAATGC	6 cut(s)	988, 1033, 1290, 1426, 1428, 1498
PdmI	GAANNNNTTC	1 cut(s)	1426
PfeI	GAWTC	2 cut(s)	555, 1448
PflFI	GACNNNGTC	2 cut(s)	191, 994
PflMI	CCANNNNNTGG	3 cut(s)	827, 993, 1100
PkrI	GCNGC	1 cut(s)	1250
PleI	GAGTC	2 cut(s)	1131, 1177
PpsI	GAGTC	2 cut(s)	1131, 1177
PpuMI	RGGWCCY	1 cut(s)	1478
PscI	ACATGT	1 cut(s)	1240
Psp124BI	GAGCTC	1 cut(s)	702
Psp5II	RGGWCCY	1 cut(s)	1478
Psp6I	CCWGG	9 cut(s)	84, 142, 189, 986, 1093, 1285, 1334, 1353, 1402
PspGI	CCWGG	9 cut(s)	84, 142, 189, 986, 1093, 1285, 1334, 1353, 1402
PspN4I	GGNNCC	7 cut(s)	83, 141, 609, 720, 1359, 1401, 1480
PspPI	GGNCC	5 cut(s)	187, 356, 434, 1400, 1478
PspPPI	RGGWCCY	1 cut(s)	1478
PstI	CTGCAG	2 cut(s)	116, 576
PstNI	CAGNNNCTG	1 cut(s)	1100
PsuI	RGATCY	1 cut(s)	607
PsyI	GACNNNGTC	2 cut(s)	191, 994
RsaI	GTAC	8 cut(s)	69, 720, 819, 846, 1109, 1231, 1239, 1510
RsaNI	GTAC	8 cut(s)	68, 719, 818, 845, 1108, 1230, 1238, 1509
RseI	CAYNNNNRTG	1 cut(s)	1056
SacI	GAGCTC	1 cut(s)	702
SaqAI	TTAA	6 cut(s)	29, 216, 459, 669, 773, 1212
SatI	GCNGC	1 cut(s)	1249
Sau3AI	GATC	7 cut(s)	234, 607, 1012, 1117, 1255, 1378, 1406
Sau96I	GGNCC	5 cut(s)	187, 356, 434, 1400, 1478
ScaI	AGTACT	2 cut(s)	69, 1231
SchI	GAGTC	2 cut(s)	1132, 1178
SduI	GDGCHC	3 cut(s)	277, 702, 1362
SexAI	ACCWGGT	1 cut(s)	189
SfaNI	GCATC	2 cut(s)	429, 535
SfcI	CTRYAG	4 cut(s)	112, 362, 391, 572
SinI	GGWCC	4 cut(s)	187, 356, 434, 1478
SmiMI	CAYNNNNRTG	1 cut(s)	1056
SmlI	CTYRAG	2 cut(s)	957, 1265
SmoI	CTYRAG	2 cut(s)	957, 1265
Sse9I	AATT	6 cut(s)	398, 412, 493, 512, 578, 708
SsiI	CCGC	3 cut(s)	716, 947, 1298
SspI	AATATT	1 cut(s)	891
SspMI	CTAG	6 cut(s)	102, 305, 567, 632, 713, 1467
SstI	GAGCTC	1 cut(s)	702
StyI	CCWWGG	3 cut(s)	280, 352, 507
TaaI	ACNGT	4 cut(s)	67, 268, 501, 1058
TaiI	ACGT	4 cut(s)	38, 174, 603, 1514
TasI	AATT	6 cut(s)	398, 412, 493, 512, 578, 708
TatI	WGTACW	5 cut(s)	67, 844, 1107, 1229, 1237
TfiI	GAWTC	2 cut(s)	555, 1448
Tru1I	TTAA	6 cut(s)	29, 216, 459, 669, 773, 1212
Tru9I	TTAA	6 cut(s)	29, 216, 459, 669, 773, 1212
TscAI	CASTG	5 cut(s)	318, 865, 908, 1005, 1061
TseFI	GTSAC	1 cut(s)	766
TseI	GCWGC	1 cut(s)	1248
Tsp45I	GTSAC	1 cut(s)	766
TspDTI	ATGAA	8 cut(s)	329, 333, 362, 899, 930, 1040, 1208, 1449
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	5 cut(s)	318, 865, 908, 1005, 1061
Tth111I	GACNNNGTC	2 cut(s)	191, 994
Van91I	CCANNNNNTGG	3 cut(s)	827, 993, 1100
VneI	GTGCAC	1 cut(s)	273
VpaK11BI	GGWCC	4 cut(s)	187, 356, 434, 1478
XapI	RAATTY	4 cut(s)	398, 512, 578, 708
XceI	RCATGY	3 cut(s)	1037, 1108, 1244
XmnI	GAANNNNTTC	1 cut(s)	1426
XspI	CTAG	6 cut(s)	102, 305, 567, 632, 713, 1467
ZrmI	AGTACT	2 cut(s)	69, 1231
Zsp2I	ATGCAT	2 cut(s)	1039, 1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.