Rmu_sc0013926.1_g000001

isoflavone

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013926.1
Physical Location & Seq
Reverse (-)
34 .. 607
574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013926.1_g000001.1.cds

Sequence Viewer

Length: 342 bp
atgggcgagcagcttttgaacggtgataaggctctctgtgttggtgaaggatcagcctcggtcgtgatggcgttgcaagatttggggtttcccaatgctcgtgaaatggagaagaagaagagtagagtactgataatcagagcaacaggaaatctgggtcaccatttagccaatgccagcctccatttctctcaccccactttcgctctcgtccgacccgacaccttctccgacccccacaagtcccaaaaccttcgagccctctccgatgtcggcgtcacactcctccaagttgtacccttgtttccatttgtggctcttaaccatgttcgaatagtttaa

Protein Analysis

113

Amino Acids

12.28

Weight (kDa)

9.03

Isoelectric Point (pI)

25.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 58
AcyI GRCGYC 1 cut(s) 276
AfaI GTAC 2 cut(s) 129, 297
AgsI TTSAA 1 cut(s) 19
AluBI AGCT 1 cut(s) 13
AluI AGCT 1 cut(s) 13
AlwI GGATC 1 cut(s) 58
ApeKI GCWGC 1 cut(s) 10
AsuHPI GGTGA 4 cut(s) 35, 56, 152, 185
AsuII TTCGAA 1 cut(s) 331
BanII GRGCYC 1 cut(s) 262
BauI CACGAG 1 cut(s) 99
BbvI GCAGC 1 cut(s) 22
BccI CCATC 1 cut(s) 61
BisI GCNGC 1 cut(s) 11
BlsI GCNGC 1 cut(s) 12
BmcAI AGTACT 1 cut(s) 129
Bpu14I TTCGAA 1 cut(s) 331
BsaHI GRCGYC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 57
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
BseDI CCNNGG 1 cut(s) 57
BseRI GAGGAG 1 cut(s) 275
BseXI GCAGC 1 cut(s) 22
Bsh1285I CGRYCG 1 cut(s) 63
BsiEI CGRYCG 1 cut(s) 63
BslFI GGGAC 1 cut(s) 229
BsmFI GGGAC 1 cut(s) 229
Bsp119I TTCGAA 1 cut(s) 331
Bsp1286I GDGCHC 1 cut(s) 262
Bsp143I GATC 1 cut(s) 50
BspPI GGATC 1 cut(s) 58
BspT104I TTCGAA 1 cut(s) 331
BssECI CCNNGG 1 cut(s) 57
BssMI GATC 1 cut(s) 50
BssNI GRCGYC 1 cut(s) 276
BssSI CACGAG 1 cut(s) 99
Bst2BI CACGAG 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 23
Bst6I CTCTTC 1 cut(s) 113
BstACI GRCGYC 1 cut(s) 276
BstBI TTCGAA 1 cut(s) 331
BstC8I GCNNGC 2 cut(s) 8, 178
BstEII GGTNACC 1 cut(s) 158
BstKTI GATC 1 cut(s) 53
BstMBI GATC 1 cut(s) 50
BstMCI CGRYCG 1 cut(s) 63
BstPI GGTNACC 1 cut(s) 158
BstV1I GCAGC 1 cut(s) 22
Cac8I GCNNGC 2 cut(s) 8, 178
CseI GACGC 1 cut(s) 265
Csp6I GTAC 2 cut(s) 128, 296
CviAII CATG 1 cut(s) 326
CviJI RGCY 7 cut(s) 13, 32, 56, 170, 180, 260, 317
CviKI_1 RGCY 7 cut(s) 13, 32, 56, 170, 180, 260, 317
CviQI GTAC 2 cut(s) 128, 296
DpnI GATC 1 cut(s) 52
DpnII GATC 1 cut(s) 50
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Eco24I GRGCYC 1 cut(s) 262
Eco91I GGTNACC 1 cut(s) 158
EcoO65I GGTNACC 1 cut(s) 158
EcoT38I GRGCYC 1 cut(s) 262
FaeI CATG 1 cut(s) 329
FaiI YATR 1 cut(s) 327
FaqI GGGAC 1 cut(s) 229
FatI CATG 1 cut(s) 325
Fnu4HI GCNGC 1 cut(s) 11
FriOI GRGCYC 1 cut(s) 262
Fsp4HI GCNGC 1 cut(s) 11
GluI GCNGC 1 cut(s) 11
HgaI GACGC 1 cut(s) 265
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 1 cut(s) 329
HphI GGTGA 4 cut(s) 35, 56, 152, 185
Hpy188I TCNGA 4 cut(s) 140, 215, 232, 268
Hpy188III TCNNGA 2 cut(s) 64, 101
HpyAV CCTTC 3 cut(s) 41, 235, 263
HpyCH4III ACNGT 1 cut(s) 23
HpyCH4V TGCA 1 cut(s) 76
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 1 cut(s) 329
Kzo9I GATC 1 cut(s) 50
LpnPI CCDG 3 cut(s) 132, 140, 190
Lsp1109I GCAGC 1 cut(s) 22
MaeIII GTNAC 2 cut(s) 158, 277
MalI GATC 1 cut(s) 52
MboI GATC 1 cut(s) 50
MboII GAAGA 3 cut(s) 124, 127, 130
MhlI GDGCHC 1 cut(s) 262
MmeI TCCRAC 2 cut(s) 238, 255
MnlI CCTC 4 cut(s) 67, 191, 272, 296
MseI TTAA 2 cut(s) 321, 340
NdeII GATC 1 cut(s) 50
NlaIII CATG 1 cut(s) 329
NmuCI GTSAC 2 cut(s) 158, 277
NspV TTCGAA 1 cut(s) 331
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PkrI GCNGC 1 cut(s) 12
PspEI GGTNACC 1 cut(s) 158
RsaI GTAC 2 cut(s) 129, 297
RsaNI GTAC 2 cut(s) 128, 296
SaqAI TTAA 2 cut(s) 321, 340
SatI GCNGC 1 cut(s) 11
Sau3AI GATC 1 cut(s) 50
ScaI AGTACT 1 cut(s) 129
SduI GDGCHC 1 cut(s) 262
SetI ASST 3 cut(s) 15, 227, 255
SfuI TTCGAA 1 cut(s) 331
TaaI ACNGT 1 cut(s) 23
TaqI TCGA 2 cut(s) 256, 331
TaqII GACCGA 1 cut(s) 49
TatI WGTACW 1 cut(s) 127
Tru1I TTAA 2 cut(s) 321, 340
Tru9I TTAA 2 cut(s) 321, 340
TseFI GTSAC 2 cut(s) 158, 277
TseI GCWGC 1 cut(s) 10
Tsp45I GTSAC 2 cut(s) 158, 277
ZrmI AGTACT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.