Rh2BG386400

isoflavone

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
54789145 .. 54789707
563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG386400.1

Sequence Viewer

Length: 366 bp
ATGGAGAAGAAGAAGAGTAGAGTACTGATAATCAGAGCAACAGGAAATCTGGGTCACCATTTAGCCAATGCCAGCCTCCATTTCTCTCACCCCACTTTCGCTCTCGTCCGACCCGACACCTTCTCCGACCCCCACAAGTCCCAAAACCTTCGAGCCCTCTCCGATGCCGGCGTCACACTCCTCCAAGTCGGTTCGCTGGAAGACGAAGAAAACCTTGTTGGAGCAGTGAAGCAAGTTGATGTTGTGATTTTTGCTGTTCAGGTCAAACAGGTGCTCCATCAGAATCCAAGTTATCAAAAATGCTGGTTCCATCAAGATTTACAAACTCAGTTAAGGAGTGGTGACCAACAGAAGGCATCTTATTAA

Protein Analysis

121

Amino Acids

13.56

Weight (kDa)

8.82

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 4 - 91 5.8e-17 NmrA-like family
NAD_binding_10 PF13460 13 - 89 7.9e-06 NAD(P)H-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 1 cut(s) 24
AfiI CCNNNNNNNGG 1 cut(s) 352
AjuI GAANNNNNNNTTGG 2 cut(s) 201, 233
Alw21I GWGCWC 1 cut(s) 276
AsuHPI GGTGA 3 cut(s) 47, 80, 353
BanII GRGCYC 1 cut(s) 157
BbsI GAAGAC 1 cut(s) 207
Bbv12I GWGCWC 1 cut(s) 276
BccI CCATC 2 cut(s) 285, 318
BmcAI AGTACT 1 cut(s) 24
BmiI GGNNCC 1 cut(s) 308
BmsI GCATC 1 cut(s) 154
BpiI GAAGAC 1 cut(s) 207
BsaHI GRCGYC 1 cut(s) 171
BsaXI ACNNNNNCTCC 4 cut(s) 107, 137, 258, 288
Bsc4I CCNNNNNNNGG 1 cut(s) 352
Bse118I RCCGGY 1 cut(s) 167
BseLI CCNNNNNNNGG 1 cut(s) 352
BseMII CTCAG 1 cut(s) 341
BseRI GAGGAG 1 cut(s) 170
BsiHKAI GWGCWC 1 cut(s) 276
BsiSI CCGG 1 cut(s) 168
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 1 cut(s) 352
BsmFI GGGAC 1 cut(s) 124
Bsp1286I GDGCHC 2 cut(s) 157, 276
BspCNI CTCAG 1 cut(s) 340
BspLI GGNNCC 1 cut(s) 308
BsrFI RCCGGY 1 cut(s) 167
BssAI RCCGGY 1 cut(s) 167
BssNI GRCGYC 1 cut(s) 171
Bst6I CTCTTC 1 cut(s) 8
BstACI GRCGYC 1 cut(s) 171
BstC8I GCNNGC 2 cut(s) 73, 169
BstDEI CTNAG 1 cut(s) 327
BstEII GGTNACC 2 cut(s) 53, 341
BstPI GGTNACC 2 cut(s) 53, 341
BstV2I GAAGAC 1 cut(s) 207
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 1 cut(s) 231
Cac8I GCNNGC 2 cut(s) 73, 169
Cfr10I RCCGGY 1 cut(s) 167
CseI GACGC 1 cut(s) 160
Csp6I GTAC 1 cut(s) 23
CviJI RGCY 3 cut(s) 65, 75, 155
CviKI_1 RGCY 3 cut(s) 65, 75, 155
CviQI GTAC 1 cut(s) 23
DdeI CTNAG 1 cut(s) 327
Eam1104I CTCTTC 1 cut(s) 8
EarI CTCTTC 1 cut(s) 8
Eco24I GRGCYC 1 cut(s) 157
Eco91I GGTNACC 2 cut(s) 53, 341
EcoO65I GGTNACC 2 cut(s) 53, 341
EcoT38I GRGCYC 1 cut(s) 157
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FaqI GGGAC 1 cut(s) 124
FriOI GRGCYC 1 cut(s) 157
HapII CCGG 1 cut(s) 168
HgaI GACGC 1 cut(s) 160
Hin1I GRCGYC 1 cut(s) 171
HinfI GANTC 1 cut(s) 283
HpaII CCGG 1 cut(s) 168
HphI GGTGA 3 cut(s) 47, 80, 353
Hpy188I TCNGA 5 cut(s) 35, 110, 127, 163, 282
Hpy188III TCNNGA 1 cut(s) 314
HpyAV CCTTC 3 cut(s) 130, 158, 346
HpyF3I CTNAG 1 cut(s) 327
Hsp92I GRCGYC 1 cut(s) 171
KroI GCCGGC 1 cut(s) 167
KroNI GCCGGC 1 cut(s) 169
LmnI GCTCC 2 cut(s) 221, 279
LpnPI CCDG 8 cut(s) 27, 35, 85, 181, 182, 245, 254, 289
LweI GCATC 1 cut(s) 154
MaeIII GTNAC 3 cut(s) 53, 172, 341
MboII GAAGA 5 cut(s) 19, 22, 25, 212, 218
MhlI GDGCHC 2 cut(s) 157, 276
MmeI TCCRAC 3 cut(s) 133, 150, 199
MnlI CCTC 3 cut(s) 86, 167, 191
MroNI GCCGGC 1 cut(s) 167
MseI TTAA 2 cut(s) 332, 364
MspI CCGG 1 cut(s) 168
NaeI GCCGGC 1 cut(s) 169
NgoMIV GCCGGC 1 cut(s) 167
NlaIV GGNNCC 1 cut(s) 308
NmuCI GTSAC 3 cut(s) 53, 172, 341
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PdiI GCCGGC 1 cut(s) 169
PfeI GAWTC 1 cut(s) 283
PspEI GGTNACC 2 cut(s) 53, 341
PspN4I GGNNCC 1 cut(s) 308
RsaI GTAC 1 cut(s) 24
RsaNI GTAC 1 cut(s) 23
SaqAI TTAA 2 cut(s) 332, 364
ScaI AGTACT 1 cut(s) 24
SduI GDGCHC 2 cut(s) 157, 276
SetI ASST 5 cut(s) 122, 150, 216, 264, 273
SfaNI GCATC 1 cut(s) 154
TaqI TCGA 1 cut(s) 151
TatI WGTACW 1 cut(s) 22
TfiI GAWTC 1 cut(s) 283
Tru1I TTAA 2 cut(s) 332, 364
Tru9I TTAA 2 cut(s) 332, 364
TscAI CASTG 1 cut(s) 231
TseFI GTSAC 3 cut(s) 53, 172, 341
Tsp45I GTSAC 3 cut(s) 53, 172, 341
TspRI CASTG 1 cut(s) 231
ZrmI AGTACT 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.