Rmu_sc0027028.1_g000001

Elongation factor 1 gamma, conserved domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0027028.1
Physical Location & Seq
Forward (+)
1 .. 386
386 bp
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UTR
Exon/CDS
Intron
Rmu_sc0027028.1_g000001.1.cds

Sequence Viewer

Length: 264 bp
cgtatggatttggctcgtagatatgcgtttgggaagatgttggtgattggatctgatcctcctttcaaggggaagggcttgtggctgttccgtgggcaagaggttccccagttcataattgatgaatgttatgatatggaactgtatgattggcataaggttgatatcactgatgaggatcaaaaggagcacgtgaaccagatgattgaagttcaggagccttttgagggggaggccttgttggatgccaaatgcttcaaatga

Protein Analysis

87

Amino Acids

10.3

Weight (kDa)

4.68

Isoelectric Point (pI)

52.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 50, 58, 186
AcvI CACGTG 1 cut(s) 193
AfiI CCNNNNNNNGG 2 cut(s) 68, 227
AgsI TTSAA 3 cut(s) 67, 209, 259
Alw21I GWGCWC 1 cut(s) 192
AlwI GGATC 3 cut(s) 50, 58, 186
AoxI GGCC 1 cut(s) 234
AsuHPI GGTGA 1 cut(s) 55
BbrPI CACGTG 1 cut(s) 193
Bbv12I GWGCWC 1 cut(s) 192
BmiI GGNNCC 2 cut(s) 105, 219
BmrI ACTGGG 1 cut(s) 103
BmsI GCATC 1 cut(s) 235
BmuI ACTGGG 1 cut(s) 103
BsaAI YACGTR 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 177
BsaJI CCNNGG 1 cut(s) 91
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 2 cut(s) 68, 227
Bse1I ACTGG 1 cut(s) 109
Bse8I GATNNNNATC 1 cut(s) 177
BseDI CCNNGG 1 cut(s) 91
BseGI GGATG 1 cut(s) 250
BseJI GATNNNNATC 1 cut(s) 177
BseLI CCNNNNNNNGG 2 cut(s) 68, 227
BseNI ACTGG 1 cut(s) 109
BshFI GGCC 1 cut(s) 236
BsiHKAI GWGCWC 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 68, 227
BsnI GGCC 1 cut(s) 236
Bsp1286I GDGCHC 1 cut(s) 192
Bsp143I GATC 3 cut(s) 50, 55, 178
BspANI GGCC 1 cut(s) 236
BspLI GGNNCC 2 cut(s) 105, 219
BspPI GGATC 3 cut(s) 50, 58, 186
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 1 cut(s) 91
BssMI GATC 3 cut(s) 50, 55, 178
Bst4CI ACNGT 1 cut(s) 144
BstBAI YACGTR 1 cut(s) 193
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 1 cut(s) 250
BstKTI GATC 3 cut(s) 53, 58, 181
BstMBI GATC 3 cut(s) 50, 55, 178
BstX2I RGATCY 1 cut(s) 50
BstYI RGATCY 1 cut(s) 50
BsuRI GGCC 1 cut(s) 236
BtgI CCRYGG 1 cut(s) 91
BtsCI GGATG 1 cut(s) 250
BtsIMutI CAGTG 1 cut(s) 168
CviJI RGCY 5 cut(s) 14, 78, 85, 220, 236
CviKI_1 RGCY 5 cut(s) 14, 78, 85, 220, 236
DpnI GATC 3 cut(s) 52, 57, 180
DpnII GATC 3 cut(s) 50, 55, 178
Eco147I AGGCCT 1 cut(s) 236
Eco32I GATATC 1 cut(s) 166
Eco72I CACGTG 1 cut(s) 193
EcoRV GATATC 1 cut(s) 166
FaiI YATR 7 cut(s) 5, 24, 116, 132, 137, 147, 156
FokI GGATG 1 cut(s) 257
HaeIII GGCC 1 cut(s) 236
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 1 cut(s) 196
Hpy188I TCNGA 1 cut(s) 55
Hpy188III TCNNGA 1 cut(s) 215
Hpy8I GTNNAC 1 cut(s) 196
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 1 cut(s) 144
HpyCH4IV ACGT 1 cut(s) 192
HpySE526I ACGT 1 cut(s) 192
Kzo9I GATC 3 cut(s) 50, 55, 178
LmnI GCTCC 2 cut(s) 187, 217
LpnPI CCDG 3 cut(s) 122, 200, 212
LweI GCATC 1 cut(s) 235
MaeII ACGT 1 cut(s) 192
MalI GATC 3 cut(s) 52, 57, 180
MboI GATC 3 cut(s) 50, 55, 178
MboII GAAGA 1 cut(s) 46
MflI RGATCY 1 cut(s) 50
MhlI GDGCHC 1 cut(s) 192
MluCI AATT 1 cut(s) 117
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 5 cut(s) 69, 94, 169, 220, 226
NdeII GATC 3 cut(s) 50, 55, 178
NlaIV GGNNCC 2 cut(s) 105, 219
PceI AGGCCT 1 cut(s) 236
PmaCI CACGTG 1 cut(s) 193
PmlI CACGTG 1 cut(s) 193
Ppu21I YACGTR 1 cut(s) 193
PspCI CACGTG 1 cut(s) 193
PspN4I GGNNCC 2 cut(s) 105, 219
PsuI RGATCY 1 cut(s) 50
Sau3AI GATC 3 cut(s) 50, 55, 178
SduI GDGCHC 1 cut(s) 192
SetI ASST 3 cut(s) 105, 162, 195
SfaNI GCATC 1 cut(s) 235
Sse9I AATT 1 cut(s) 117
SseBI AGGCCT 1 cut(s) 236
StuI AGGCCT 1 cut(s) 236
TaaI ACNGT 1 cut(s) 144
TaiI ACGT 1 cut(s) 195
TasI AATT 1 cut(s) 117
TscAI CASTG 1 cut(s) 175
TspDTI ATGAA 2 cut(s) 103, 138
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.