Rorug07G0227000

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000210
Physical Location & Seq
Reverse (-)
20705226 .. 20711124
5899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0227000.1

Sequence Viewer

Length: 1683 bp
ATGAATGAAGACCAACGCTCACTCCTCCTCAGCTCCTCATCTCGCTTCCCACCTCCACAAGGAGTGAAGCTGTCATATGGAACGGCTGGGTTCAGAGCGGATGCCTCGATTCTTCAATCCACGGTTTACAGGGTGGGAATTTTAGCAGCTCTTAGAGCAGTCAAGACCCAATCAGTGATTGGGCTGATGATCACGGCCTCTCACAACAAAGTCTCTGATAATGGAATCAAAGTTGCTGACCCTAGTGGTGGAATGCTTTCTCAAGATTGGGAGCCCTTTGCGGATACACTTGCCAGTGCCCGTGATCCCCAACAACTTGTTCAGTTGATTACTGAATTTGTGGAAAATGAAAAAATCACACTTGATGGAGCTAAGTCGGTGGAGATATTACTGGCAAGAGATACAAGGCCCAGTGGTGAATCTCTGCTTGAAGCTGCTAAACAGGGAATCAGTTCCATTATTGGAGCAGTTGCCCTTGACATGGGAATTTTAACAACCCCGACACTCCATTGGATGGTTCGTGCTAGAAATAAGGGTGCCAAAGCATCGGAAATGGATTACTTTGAGCAGCTGTCCAGCTCATTCAGGTGCTTGGTTGATCTGATTCCTAGTGGATCTAACACCAGAAATGAGGCAGACAAGTTGGTTGTAGATGGGGCTAATGGTGTTGGCGGAGAAAAACTCGAAATCTTGAAGAAGATGTTGAGTGGTTTGGTTATTGATGTTCGGAACTCTGGAAAACAAGGAGGTGTACTCAATGAAGGAGTTGGTGCTGATTATGTGCAGAAAGAGAAGGTTGCTCCGTCTGGTTTTGGTTCACAAGATGTTGGGATAAGGTGTTGTAGCTTGGATGGTGATGCTGATCGACTTGTATATTTTATTGTGGCATCTACAAGTAGTAGTAAGATCGAACTTGTTGATGGCGACAAGATATTATCGTTGTTTGCTGTATTCATCAAGGAGCAATTAAGCATCTTGAATAAGAAAAGAGATGTTAATGTGAATGATGGTTATCAATGCTGTCTTGGTATTGTGCAAACGGCCTATGCAAATGGAGCATCCACAGATTATCTTAAACAGTTAGGCCTGGAAGTCATTTTCACTCCTACAGGTGTGAAGTACCTGCATGAGAAAGCAGCACAGTATGATATTGGAATATATTTTGAGGCAAATGGCCATGGCACCATCTTGTTCTCAGAACAATTCTTATGTTGGTTAGAGGCCAAGATTACTGAGTTTTCTGATGTAGCTAAAGGTTCGGAACCACATAAGGCAGCTATGAGACTCTTGGCGGTCACAAAATTGATTAACCAGGCTGTTGGAGATGCTTTGAGTGGGATGCTCTTGGTTGAGGCCATTTTACAACATATGGGATGGCCAATAAAGAAATGGAATGAGCTTTATCATGATCTACCAAGTAGGCAGCTTAAGGTCAAAGTTGTAGACAGAACTGCTGTTGTCACAGCAAATGCAGAAACTGTGGTTGCGAAGCCCCCTGGCATTCAAGAAGCTATTAACGCTGAAACTGCCAAGTACCCTAGAGGCCGGTGTTTTATACGACCATCGGGAACAGAAGATGTTATACGTGTATATGCAGAGGCATCCACAGAGAATGCAGCGGACAGCTTAGCCAGTTCTGTGGCAAAACTTGTAGACCAAAAACTTGGATCTGGCACCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

560

Amino Acids

60.3

Weight (kDa)

5.81

Isoelectric Point (pI)

30.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGM_PMM_I PF02878 55 - 89 7.6e-07 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AMG1_II PF21405 182 - 291 1.9e-07 Phosphoacetylglucosamine mutase AMG1, domain II
AMG1_III PF21404 307 - 459 8.9e-53 Phosphoacetylglucosamine mutase AMG1, domain III
PGM_PMM_III PF02880 307 - 396 1e-06 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV PF00408 488 - 549 3.8e-12 Phosphoglucomutase/phosphomannomutase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000210)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66980
fragaria_vesca FvH4_2g27400 FvH4_2g27400 FvH4_2g27400 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_3g19710 FvH4_5g30470 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g23440 FvH4_7g23440 FvH4_7g23440
malus_domestica MD03G1230100.v1.1 MD03G1230200.v1.1 MD04G1034500.v1.1 MD04G1034600.v1.1 MD08G1039500.v1.1 MD11G1250800.v1.1 MD11G1251100.v1.1 MD11G1251200.v1.1
prunus_persica Prupe.1G388000_v2.0.a1 Prupe.1G388000_v2.0.a1 Prupe.1G388100_v2.0.a1 Prupe.4G178000_v2.0.a1 Prupe.4G178100_v2.0.a1 Prupe.4G178100_v2.0.a1 Prupe.4G178200_v2.0.a1 Prupe.4G178300_v2.0.a1 Prupe.4G178400_v2.0.a1 Prupe.4G178500_v2.0.a1 Prupe.4G206300_v2.0.a1 Prupe.4G206300_v2.0.a1 Prupe.4G206800_v2.0.a1 Prupe.4G206900_v2.0.a1 Prupe.4G207000_v2.0.a1 Prupe.7G064600_v2.0.a1 Prupe.7G064600_v2.0.a1
pyrus_communis pycom03g17770 pycom04g02860 pycom04g02870 pycom08g03160 pycom11g22190 pycom11g22200 pycom11g22210 pycom11g22220
rosa_chinensis RchiOBHm_Chr1g0318651 RchiOBHm_Chr1g0318881 RchiOBHm_Chr1g0319011 RchiOBHm_Chr1g0356381 RchiOBHm_Chr3g0482191 RchiOBHm_Chr5g0033031 RchiOBHm_Chr5g0033041 RchiOBHm_Chr6g0296251 RchiOBHm_Chr6g0299611 RchiOBHm_Chr7g0208501 RchiOBHm_Chr7g0224941
rosa_laevigata RLG00000001845 RLG00000011405 RLG00000011713 RLG00000023362 RLG00000030508 RLG00000030520 RLG00000033444
rosa_multiflora Rmu_sc0000307.1_g000013 Rmu_sc0000986.1_g000010 Rmu_sc0000986.1_g000011 Rmu_sc0002895.1_g000002 Rmu_sc0003503.1_g000005 Rmu_ssc0000357.1_g000023
rosa_roxburghii Rroxscaffold_1G00046900 Rroxscaffold_1G00046920 Rroxscaffold_1G00046930 Rroxscaffold_1G00046940 Rroxscaffold_1G00047010 Rroxscaffold_1G00047020 Rroxscaffold_1G00047030 Rroxscaffold_1G00059830 Rroxscaffold_3G00234250 Rroxscaffold_4G00299610 Rroxscaffold_4G00321350 Rroxscaffold_4G00328680 Rroxscaffold_4G00329000 Rroxscaffold_6G00399560 Rroxscaffold_6G00399970 Rroxscaffold_7G00168510 Rroxscaffold_7G00171700 Rroxscaffold_7G00178360
rosa_rugosa Rorug01G0022500 Rorug01G0022800 Rorug01G0026400 Rorug03G0195600 Rorug05G0135400 Rorug06G0260100 Rorug06G0260200.1 Rorug06G0291000 Rorug06G0291100 Rorug06G0291100 Rorug07G0227000
rosa_samantha Rh1AG035600 Rh1AG038500 Rh1AG045500 Rh1BG031400 Rh1BG034700 Rh1CG034500 Rh1CG037200 Rh1CG048500 Rh1DG032800 Rh1DG035800 Rh1DG052700 Rh3AG247000 Rh3CG277700 Rh3DG274200 Rh5AG227900 Rh5AG228000 Rh5CG256800 Rh5CG256900 Rh5CG257100 Rh5DG234000 Rh5DG234200 Rh6AG401800 Rh6BG380000 Rh6BG410200 Rh6CG385400 Rh6CG415800 Rh6DG372600 Rh6DG403000 Rh7AG376300 Rh7BG362400 Rh7DG372500
rosa_wichuraiana Rw0G008540 Rw1G002780 Rw1G002970 Rw3G022090 Rw5G020870 Rw6G032430 Rw6G035160 Rw7G031430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1131
AccB1I GGYRCC 3 cut(s) 536, 1181, 1673
AccB7I CCANNNNNTGG 1 cut(s) 514
AccBSI CCGCTC 1 cut(s) 98
AccI GTMKAC 2 cut(s) 1443, 1653
AciI CCGC 5 cut(s) 98, 281, 672, 1292, 1619
AclWI GGATC 3 cut(s) 299, 622, 1675
AcoI YGGCCR 2 cut(s) 1174, 1376
AcsI RAATTY 3 cut(s) 138, 335, 486
AfaI GTAC 3 cut(s) 753, 1121, 1535
AfiI CCNNNNNNNGG 4 cut(s) 59, 248, 481, 514
AflII CTTAAG 1 cut(s) 1427
AflIII ACRYGT 1 cut(s) 1585
AgsI TTSAA 5 cut(s) 116, 431, 694, 979, 1505
AjnI CCWGG 3 cut(s) 1086, 1311, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 303, 335
Alw26I GTCTC 2 cut(s) 217, 1276
AlwI GGATC 3 cut(s) 299, 622, 1675
AlwNI CAGNNNCTG 1 cut(s) 1478
AoxI GGCC 9 cut(s) 195, 407, 1041, 1084, 1174, 1221, 1353, 1376, 1543
ApeKI GCWGC 7 cut(s) 146, 434, 568, 1136, 1274, 1423, 1616
ApoI RAATTY 3 cut(s) 138, 335, 486
Asp700I GAANNNNTTC 2 cut(s) 256, 451
AspS9I GGNCC 1 cut(s) 408
AsuHPI GGTGA 2 cut(s) 428, 866
BaeGI GKGCMC 1 cut(s) 301
BalI TGGCCA 2 cut(s) 1176, 1378
BanI GGYRCC 3 cut(s) 536, 1181, 1673
BanII GRGCYC 1 cut(s) 276
BarI GAAGNNNNNNTAC 2 cut(s) 1566, 1598
BbsI GAAGAC 1 cut(s) 15
BbvCI CCTCAGC 1 cut(s) 29
BbvI GCAGC 7 cut(s) 158, 421, 580, 1148, 1286, 1435, 1628
BccI CCATC 9 cut(s) 359, 508, 647, 845, 914, 1001, 1193, 1368, 1570
BceAI ACGGC 3 cut(s) 99, 210, 1056
BciT130I CCWGG 3 cut(s) 1088, 1313, 1497
BciVI GTATCC 1 cut(s) 277
BclI TGATCA 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 217, 1276
BfaI CTAG 4 cut(s) 243, 525, 609, 1539
BfmI CTRYAG 1 cut(s) 1107
BfrI CTTAAG 1 cut(s) 1427
BfuAI ACCTGC 1 cut(s) 1131
BfuI GTATCC 1 cut(s) 277
BisI GCNGC 7 cut(s) 147, 435, 569, 1137, 1275, 1424, 1617
BlpI GCTNAGC 1 cut(s) 1627
BlsI GCNGC 7 cut(s) 148, 436, 570, 1138, 1276, 1425, 1618
Bme1390I CCNGG 3 cut(s) 1088, 1313, 1497
BmgT120I GGNCC 1 cut(s) 408
BmiI GGNNCC 5 cut(s) 273, 538, 1183, 1263, 1675
BmrFI CCNGG 3 cut(s) 1088, 1313, 1497
BmrI ACTGGG 1 cut(s) 405
BmsI GCATC 9 cut(s) 91, 554, 847, 896, 981, 1067, 1315, 1329, 1610
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 1 cut(s) 15
BplI GAGNNNNNCTC 4 cut(s) 666, 698, 738, 770
Bpu10I CCTNAGC 1 cut(s) 29
Bpu1102I GCTNAGC 1 cut(s) 1627
BpuEI CTTGAG 1 cut(s) 246
BsaAI YACGTR 1 cut(s) 1586
BsaBI GATNNNNATC 2 cut(s) 861, 1011
BsaJI CCNNGG 3 cut(s) 120, 1177, 1495
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 4 cut(s) 59, 248, 481, 514
Bse118I RCCGGY 1 cut(s) 1545
Bse1I ACTGG 4 cut(s) 294, 396, 411, 1632
Bse8I GATNNNNATC 2 cut(s) 861, 1011
BseBI CCWGG 3 cut(s) 1088, 1313, 1497
BseDI CCNNGG 3 cut(s) 120, 1177, 1495
BseGI GGATG 7 cut(s) 106, 519, 856, 1058, 1344, 1379, 1601
BseJI GATNNNNATC 2 cut(s) 861, 1011
BseLI CCNNNNNNNGG 4 cut(s) 59, 248, 481, 514
BseMII CTCAG 3 cut(s) 43, 1209, 1224
BseNI ACTGG 4 cut(s) 294, 396, 411, 1632
BseRI GAGGAG 3 cut(s) 14, 17, 25
BseSI GKGCMC 1 cut(s) 301
BseXI GCAGC 7 cut(s) 158, 421, 580, 1148, 1286, 1435, 1628
BseYI CCCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 803
BshFI GGCC 9 cut(s) 197, 409, 1043, 1086, 1176, 1223, 1355, 1378, 1545
BshNI GGYRCC 3 cut(s) 536, 1181, 1673
BsiSI CCGG 1 cut(s) 1546
BslI CCNNNNNNNGG 4 cut(s) 59, 248, 481, 514
BsmAI GTCTC 2 cut(s) 217, 1276
BsmI GAATGC 3 cut(s) 258, 1500, 1618
BsnI GGCC 9 cut(s) 197, 409, 1043, 1086, 1176, 1223, 1355, 1378, 1545
Bsp1286I GDGCHC 2 cut(s) 276, 301
Bsp143I GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
Bsp1720I GCTNAGC 1 cut(s) 1627
Bsp19I CCATGG 1 cut(s) 1177
BspACI CCGC 5 cut(s) 98, 281, 672, 1292, 1619
BspANI GGCC 9 cut(s) 197, 409, 1043, 1086, 1176, 1223, 1355, 1378, 1545
BspCNI CTCAG 3 cut(s) 42, 1208, 1225
BspHI TCATGA 2 cut(s) 1405, 1679
BspLI GGNNCC 5 cut(s) 273, 538, 1183, 1263, 1675
BspMI ACCTGC 1 cut(s) 1131
BspPI GGATC 3 cut(s) 299, 622, 1675
BspT107I GGYRCC 3 cut(s) 536, 1181, 1673
BspTI CTTAAG 1 cut(s) 1427
BsrBI CCGCTC 1 cut(s) 98
BsrFI RCCGGY 1 cut(s) 1545
BsrI ACTGG 4 cut(s) 294, 396, 411, 1632
BssAI RCCGGY 1 cut(s) 1545
BssECI CCNNGG 3 cut(s) 120, 1177, 1495
BssMI GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
BssT1I CCWWGG 1 cut(s) 1177
Bst2UI CCWGG 3 cut(s) 1088, 1313, 1497
Bst4CI ACNGT 4 cut(s) 124, 1080, 1143, 1480
BstAFI CTTAAG 1 cut(s) 1427
BstBAI YACGTR 1 cut(s) 1586
BstDEI CTNAG 6 cut(s) 29, 152, 372, 1195, 1233, 1627
BstDSI CCRYGG 2 cut(s) 120, 1177
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 7 cut(s) 106, 519, 856, 1058, 1344, 1379, 1601
BstKTI GATC 8 cut(s) 192, 307, 601, 617, 865, 909, 1411, 1670
BstMAI GTCTC 2 cut(s) 217, 1276
BstMBI GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
BstMWI GCNNNNNNNGC 4 cut(s) 155, 1055, 1517, 1526
BstNI CCWGG 3 cut(s) 1088, 1313, 1497
BstSCI CCNGG 3 cut(s) 1086, 1311, 1495
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 1 cut(s) 301
BstV1I GCAGC 7 cut(s) 158, 421, 580, 1148, 1286, 1435, 1628
BstV2I GAAGAC 1 cut(s) 15
BstX2I RGATCY 2 cut(s) 614, 1667
BstXI CCANNNNNNTGG 3 cut(s) 1319, 1639, 1664
BstYI RGATCY 2 cut(s) 614, 1667
BsuI GTATCC 1 cut(s) 277
BsuRI GGCC 9 cut(s) 197, 409, 1043, 1086, 1176, 1223, 1355, 1378, 1545
BtgI CCRYGG 2 cut(s) 120, 1177
BtsCI GGATG 7 cut(s) 106, 519, 856, 1058, 1344, 1379, 1601
BtsIMutI CAGTG 3 cut(s) 180, 301, 418
BveI ACCTGC 1 cut(s) 1131
CaiI CAGNNNCTG 1 cut(s) 1478
CciI TCATGA 2 cut(s) 1405, 1679
Cfr10I RCCGGY 1 cut(s) 1545
Cfr13I GGNCC 1 cut(s) 408
Csp6I GTAC 3 cut(s) 752, 1120, 1534
CviAII CATG 5 cut(s) 481, 1127, 1178, 1406, 1680
CviQI GTAC 3 cut(s) 752, 1120, 1534
DdeI CTNAG 6 cut(s) 29, 152, 372, 1195, 1233, 1627
DpnI GATC 8 cut(s) 191, 306, 600, 616, 864, 908, 1410, 1669
DpnII GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
EaeI YGGCCR 2 cut(s) 1174, 1376
EciI GGCGGA 1 cut(s) 687
Eco130I CCWWGG 1 cut(s) 1177
Eco147I AGGCCT 1 cut(s) 1086
Eco24I GRGCYC 1 cut(s) 276
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoRII CCWGG 3 cut(s) 1086, 1311, 1495
EcoT14I CCWWGG 1 cut(s) 1177
EcoT38I GRGCYC 1 cut(s) 276
ErhI CCWWGG 1 cut(s) 1177
FaeI CATG 5 cut(s) 484, 1130, 1181, 1409, 1683
FatI CATG 5 cut(s) 480, 1126, 1177, 1405, 1679
FauNDI CATATG 2 cut(s) 76, 1368
FbaI TGATCA 1 cut(s) 189
FblI GTMKAC 2 cut(s) 1443, 1653
Fnu4HI GCNGC 7 cut(s) 147, 435, 569, 1137, 1275, 1424, 1617
FokI GGATG 7 cut(s) 113, 526, 863, 1045, 1351, 1386, 1588
FriOI GRGCYC 1 cut(s) 276
Fsp4HI GCNGC 7 cut(s) 147, 435, 569, 1137, 1275, 1424, 1617
FspBI CTAG 4 cut(s) 243, 525, 609, 1539
GluI GCNGC 7 cut(s) 147, 435, 569, 1137, 1275, 1424, 1617
GsaI CCCAGC 1 cut(s) 90
HaeIII GGCC 9 cut(s) 197, 409, 1043, 1086, 1176, 1223, 1355, 1378, 1545
HapII CCGG 1 cut(s) 1546
Hin1II CATG 5 cut(s) 484, 1130, 1181, 1409, 1683
HinfI GANTC 6 cut(s) 109, 225, 419, 447, 604, 1284
HpaII CCGG 1 cut(s) 1546
HphI GGTGA 2 cut(s) 428, 866
Hpy166II GTNNAC 5 cut(s) 127, 752, 818, 1444, 1654
Hpy188I TCNGA 8 cut(s) 95, 217, 550, 603, 729, 1198, 1243, 1261
Hpy188III TCNNGA 9 cut(s) 163, 263, 691, 735, 976, 1406, 1505, 1566, 1680
Hpy8I GTNNAC 5 cut(s) 127, 752, 818, 1444, 1654
HpyAV CCTTC 2 cut(s) 755, 787
HpyCH4III ACNGT 4 cut(s) 124, 1080, 1143, 1480
HpyCH4IV ACGT 1 cut(s) 1585
HpyCH4V TGCA 7 cut(s) 784, 1036, 1049, 1126, 1472, 1595, 1616
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 1055, 1517, 1526
HpyF3I CTNAG 6 cut(s) 29, 152, 372, 1195, 1233, 1627
HpySE526I ACGT 1 cut(s) 1585
Hsp92II CATG 5 cut(s) 484, 1130, 1181, 1409, 1683
Ksp22I TGATCA 1 cut(s) 189
Kzo9I GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
LmnI GCTCC 7 cut(s) 38, 271, 368, 464, 805, 961, 1055
Lsp1109I GCAGC 7 cut(s) 158, 421, 580, 1148, 1286, 1435, 1628
LweI GCATC 9 cut(s) 91, 554, 847, 896, 981, 1067, 1315, 1329, 1610
MaeI CTAG 4 cut(s) 243, 525, 609, 1539
MaeII ACGT 1 cut(s) 1585
MaeIII GTNAC 2 cut(s) 1294, 1459
MalI GATC 8 cut(s) 191, 306, 600, 616, 864, 908, 1410, 1669
MbiI CCGCTC 1 cut(s) 98
MboI GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
MboII GAAGA 5 cut(s) 20, 104, 706, 709, 1586
MflI RGATCY 2 cut(s) 614, 1667
MhlI GDGCHC 2 cut(s) 276, 301
MlsI TGGCCA 2 cut(s) 1176, 1378
MluCI AATT 6 cut(s) 138, 335, 486, 965, 1202, 1301
MluNI TGGCCA 2 cut(s) 1176, 1378
MlyI GAGTC 1 cut(s) 1278
MmeI TCCRAC 1 cut(s) 1300
Mox20I TGGCCA 2 cut(s) 1176, 1378
MroXI GAANNNNTTC 2 cut(s) 256, 451
MscI TGGCCA 2 cut(s) 1176, 1378
MseI TTAA 7 cut(s) 491, 968, 996, 1074, 1308, 1428, 1515
MslI CAYNNNNRTG 1 cut(s) 586
Msp20I TGGCCA 2 cut(s) 1176, 1378
MspA1I CMGCKG 2 cut(s) 571, 1619
MspCI CTTAAG 1 cut(s) 1427
MspI CCGG 1 cut(s) 1546
MspR9I CCNGG 3 cut(s) 1088, 1313, 1497
Mva1269I GAATGC 3 cut(s) 258, 1500, 1618
MvaI CCWGG 3 cut(s) 1088, 1313, 1497
MwoI GCNNNNNNNGC 4 cut(s) 155, 1055, 1517, 1526
NcoI CCATGG 1 cut(s) 1177
NdeI CATATG 2 cut(s) 76, 1368
NdeII GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
NlaIII CATG 5 cut(s) 484, 1130, 1181, 1409, 1683
NlaIV GGNNCC 5 cut(s) 273, 538, 1183, 1263, 1675
NmuCI GTSAC 2 cut(s) 1294, 1459
PagI TCATGA 2 cut(s) 1405, 1679
PceI AGGCCT 1 cut(s) 1086
PctI GAATGC 3 cut(s) 258, 1500, 1618
PdmI GAANNNNTTC 2 cut(s) 256, 451
PfeI GAWTC 5 cut(s) 109, 225, 419, 447, 604
PflMI CCANNNNNTGG 1 cut(s) 514
PkrI GCNGC 7 cut(s) 148, 436, 570, 1138, 1276, 1425, 1618
PleI GAGTC 1 cut(s) 1278
PpsI GAGTC 1 cut(s) 1278
Ppu21I YACGTR 1 cut(s) 1586
Psp6I CCWGG 3 cut(s) 1086, 1311, 1495
PspFI CCCAGC 1 cut(s) 86
PspGI CCWGG 3 cut(s) 1086, 1311, 1495
PspN4I GGNNCC 5 cut(s) 273, 538, 1183, 1263, 1675
PspPI GGNCC 1 cut(s) 408
PstNI CAGNNNCTG 1 cut(s) 1478
PsuI RGATCY 2 cut(s) 614, 1667
PvuII CAGCTG 1 cut(s) 571
RsaI GTAC 3 cut(s) 753, 1121, 1535
RsaNI GTAC 3 cut(s) 752, 1120, 1534
RseI CAYNNNNRTG 1 cut(s) 586
SaqAI TTAA 7 cut(s) 491, 968, 996, 1074, 1308, 1428, 1515
SatI GCNGC 7 cut(s) 147, 435, 569, 1137, 1275, 1424, 1617
Sau3AI GATC 8 cut(s) 189, 304, 598, 614, 862, 906, 1408, 1667
Sau96I GGNCC 1 cut(s) 408
SchI GAGTC 1 cut(s) 1278
ScrFI CCNGG 3 cut(s) 1088, 1313, 1497
SduI GDGCHC 2 cut(s) 276, 301
SfaNI GCATC 9 cut(s) 91, 554, 847, 896, 981, 1067, 1315, 1329, 1610
SfcI CTRYAG 1 cut(s) 1107
SmiMI CAYNNNNRTG 1 cut(s) 586
SmlI CTYRAG 2 cut(s) 261, 1427
SmoI CTYRAG 2 cut(s) 261, 1427
Sse9I AATT 6 cut(s) 138, 335, 486, 965, 1202, 1301
SseBI AGGCCT 1 cut(s) 1086
SsiI CCGC 5 cut(s) 98, 281, 672, 1292, 1619
SspMI CTAG 4 cut(s) 243, 525, 609, 1539
StuI AGGCCT 1 cut(s) 1086
StyD4I CCNGG 3 cut(s) 1086, 1311, 1495
StyI CCWWGG 1 cut(s) 1177
TaaI ACNGT 4 cut(s) 124, 1080, 1143, 1480
TaiI ACGT 1 cut(s) 1588
TaqI TCGA 4 cut(s) 107, 684, 865, 909
TasI AATT 6 cut(s) 138, 335, 486, 965, 1202, 1301
TatI WGTACW 1 cut(s) 751
TfiI GAWTC 5 cut(s) 109, 225, 419, 447, 604
Tru1I TTAA 7 cut(s) 491, 968, 996, 1074, 1308, 1428, 1515
Tru9I TTAA 7 cut(s) 491, 968, 996, 1074, 1308, 1428, 1515
TscAI CASTG 3 cut(s) 180, 301, 418
TseFI GTSAC 2 cut(s) 1294, 1459
TseI GCWGC 7 cut(s) 146, 434, 568, 1136, 1274, 1423, 1616
Tsp45I GTSAC 2 cut(s) 1294, 1459
TspDTI ATGAA 5 cut(s) 17, 21, 363, 774, 943
TspGWI ACGGA 1 cut(s) 792
TspRI CASTG 3 cut(s) 180, 301, 418
Van91I CCANNNNNTGG 1 cut(s) 514
Vha464I CTTAAG 1 cut(s) 1427
XagI CCTNNNNNAGG 1 cut(s) 57
XapI RAATTY 3 cut(s) 138, 335, 486
XcmI CCANNNNNNNNNTGG 2 cut(s) 176, 1386
XmiI GTMKAC 2 cut(s) 1443, 1653
XmnI GAANNNNTTC 2 cut(s) 256, 451
XspI CTAG 4 cut(s) 243, 525, 609, 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.