Rroxscaffold_1G00046930

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000210
Physical Location & Seq
Reverse (-)
66360539 .. 66369544
9006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00046930.1

Sequence Viewer

Length: 1467 bp
ATGAAGGTGAAATTGTCCCCACCGTGGATGTTGCGGACCCCACTTCTAGGCTTCTCTCCCAGCATTTTCGGAAGAGTCACCAGCTCCGTGCTTGGCCTTGCTTCATCAACCCCAACTCCTCAGCTTTTCGTGTCTCATGAGCGTCTTGTTCTTACCCCACTTCTCAAGGATAAAGCTGTTCAAATTGTGGAAGGTCCGTCGGAATGCCATTGGGATTCTTGGTGCATTGTCACCATGAAGAGGTTCCGGGACTTGTGTGGAGGACCCTTTGAAGGTTCTCGGGAGAATATTTTTGGGGACCAGGGACCAAATACTCAACAACGACAAGAAGTGTGTGATGGTGGACCGGAAGTTGAAGTTAGCATACGTTACTCTACGATCCGCTACGATTCGAATGCTAAGATACTTGAGGCCCGGGGATTTTTTGAGTACTGTTTCTTTGTATGGAAGGAGATTCTGGATTTGGGTTCAGCAAAGTCAAGGACCTGGTCAGCTCGGTCAACTCAAGTTCATAAATGGGGCATGTGTATGCACGACGAGGCCACTTCTTTCTCCAGATCGCTTGATTTGAGGATACCACCTAAGTTTTCCAAGAACCACATTCGACCATCACTTGGAAAATGTGGTCTTAGAGGCCCTAGTGGAAAATGCTGGAATGTGGAACTGGAAAGAACAGAGAATGGCTTGTTCTTCCACAATGATGGTTGGCAGACTTTTGTGAAGGATCACCTTCTACAAGTTGGGGACTTTTTGGTTTTCCGTTACGACGGTGAATCAAATTTTGAGGTTACATTATATGATAGAACTTGTTGTGAGAAAGATGTTGAAGTACCCAAGAGGAGAAGGAGCCGTCCTGCGGCGAATGAAAGAAACTCAGCTCAGGTTATTAACCTTGAAACCGAAAACTACAACAAAAAAACTGAAAAGAGAACCAGCATTGATGGCAGAAGAAATCGGTCTGAATCAAACATCAAATGGAATAATGGATCCATCTTGTTCAAATCGGAGAATTCATATTTGAAACTAACTTTGAAGAGAAAGGCTCAACAATATGCGGTGCGTATACCGCCCAAGTTTACCAAGAACCACATCCGACCATCACTTTGCAAATGTGTTCTTAGAGGCCCTAGTGGACAACGATGTGATGTGGAACTGGAAAGGAGAGAGAATGGCTTGTTCTTCCACAATCATGGTTGGCATCGCTTTGTGAAGGATCATCGTCTACAATTTGGGGACTTTCTGGTTTTCCATTATGATGGTGAATCGAAGTTTAAGGTTAAAATATATGATAGAACTTGTTGTGAGATAGATGTTGAAGTAGCCAAGAGGAGAAATGGCCTTCCTGCTGCTCCCTCGGCGAATGAAGGCTACCAATTAGCTTGGGTGAAAGATGAAATTGTTGACCTGAAAACCGAATACTACAACAGAGACGATACTGAAAATGCTGACAAGAGAAGGCGTAAGTAG

Protein Analysis

488

Amino Acids

56.56

Weight (kDa)

9.25

Isoelectric Point (pI)

56.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 185 - 267 1.9e-15 B3 DNA binding domain
B3 PF02362 352 - 431 2.1e-15 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000210)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66980
fragaria_vesca FvH4_2g27400 FvH4_2g27400 FvH4_2g27400 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_2g40960 FvH4_3g19710 FvH4_5g30470 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_6g23740 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g01780 FvH4_7g23440 FvH4_7g23440 FvH4_7g23440
malus_domestica MD03G1230100.v1.1 MD03G1230200.v1.1 MD04G1034500.v1.1 MD04G1034600.v1.1 MD08G1039500.v1.1 MD11G1250800.v1.1 MD11G1251100.v1.1 MD11G1251200.v1.1
prunus_persica Prupe.1G388000_v2.0.a1 Prupe.1G388000_v2.0.a1 Prupe.1G388100_v2.0.a1 Prupe.4G178000_v2.0.a1 Prupe.4G178100_v2.0.a1 Prupe.4G178100_v2.0.a1 Prupe.4G178200_v2.0.a1 Prupe.4G178300_v2.0.a1 Prupe.4G178400_v2.0.a1 Prupe.4G178500_v2.0.a1 Prupe.4G206300_v2.0.a1 Prupe.4G206300_v2.0.a1 Prupe.4G206800_v2.0.a1 Prupe.4G206900_v2.0.a1 Prupe.4G207000_v2.0.a1 Prupe.7G064600_v2.0.a1 Prupe.7G064600_v2.0.a1
pyrus_communis pycom03g17770 pycom04g02860 pycom04g02870 pycom08g03160 pycom11g22190 pycom11g22200 pycom11g22210 pycom11g22220
rosa_chinensis RchiOBHm_Chr1g0318651 RchiOBHm_Chr1g0318881 RchiOBHm_Chr1g0319011 RchiOBHm_Chr1g0356381 RchiOBHm_Chr3g0482191 RchiOBHm_Chr5g0033031 RchiOBHm_Chr5g0033041 RchiOBHm_Chr6g0296251 RchiOBHm_Chr6g0299611 RchiOBHm_Chr7g0208501 RchiOBHm_Chr7g0224941
rosa_laevigata RLG00000001845 RLG00000011405 RLG00000011713 RLG00000023362 RLG00000030508 RLG00000030520 RLG00000033444
rosa_multiflora Rmu_sc0000307.1_g000013 Rmu_sc0000986.1_g000010 Rmu_sc0000986.1_g000011 Rmu_sc0002895.1_g000002 Rmu_sc0003503.1_g000005 Rmu_ssc0000357.1_g000023
rosa_roxburghii Rroxscaffold_1G00046900 Rroxscaffold_1G00046920 Rroxscaffold_1G00046930 Rroxscaffold_1G00046940 Rroxscaffold_1G00047010 Rroxscaffold_1G00047020 Rroxscaffold_1G00047030 Rroxscaffold_1G00059830 Rroxscaffold_3G00234250 Rroxscaffold_4G00299610 Rroxscaffold_4G00321350 Rroxscaffold_4G00328680 Rroxscaffold_4G00329000 Rroxscaffold_6G00399560 Rroxscaffold_6G00399970 Rroxscaffold_7G00168510 Rroxscaffold_7G00171700 Rroxscaffold_7G00178360
rosa_rugosa Rorug01G0022500 Rorug01G0022800 Rorug01G0026400 Rorug03G0195600 Rorug05G0135400 Rorug06G0260100 Rorug06G0260200.1 Rorug06G0291000 Rorug06G0291100 Rorug06G0291100 Rorug07G0227000
rosa_samantha Rh1AG035600 Rh1AG038500 Rh1AG045500 Rh1BG031400 Rh1BG034700 Rh1CG034500 Rh1CG037200 Rh1CG048500 Rh1DG032800 Rh1DG035800 Rh1DG052700 Rh3AG247000 Rh3CG277700 Rh3DG274200 Rh5AG227900 Rh5AG228000 Rh5CG256800 Rh5CG256900 Rh5CG257100 Rh5DG234000 Rh5DG234200 Rh6AG401800 Rh6BG380000 Rh6BG410200 Rh6CG385400 Rh6CG415800 Rh6DG372600 Rh6DG403000 Rh7AG376300 Rh7BG362400 Rh7DG372500
rosa_wichuraiana Rw0G008540 Rw1G002780 Rw1G002970 Rw3G022090 Rw5G020870 Rw6G032430 Rw6G035160 Rw7G031430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 614
AccI GTMKAC 2 cut(s) 1063, 1222
AciI CCGC 5 cut(s) 34, 382, 857, 1055, 1067
AclWI GGATC 5 cut(s) 373, 732, 981, 994, 1221
AcsI RAATTY 2 cut(s) 778, 1009
AfaI GTAC 2 cut(s) 431, 831
AfiI CCNNNNNNNGG 6 cut(s) 24, 47, 240, 272, 614, 856
AgsI TTSAA 9 cut(s) 182, 272, 356, 827, 896, 1000, 1021, 1033, 1316
AjnI CCWGG 2 cut(s) 300, 485
AluBI AGCT 6 cut(s) 84, 124, 176, 494, 878, 1379
AluI AGCT 6 cut(s) 84, 124, 176, 494, 878, 1379
Alw26I GTCTC 2 cut(s) 138, 1422
AlwI GGATC 5 cut(s) 373, 732, 981, 994, 1221
Ama87I CYCGRG 2 cut(s) 279, 414
AoxI GGCC 6 cut(s) 94, 411, 540, 634, 1123, 1336
ApeKI GCWGC 1 cut(s) 1346
ApoI RAATTY 2 cut(s) 778, 1009
ArsI GACNNNNNNTTYG 2 cut(s) 1086, 1118
Asp700I GAANNNNTTC 1 cut(s) 242
AsuC2I CCSGG 3 cut(s) 248, 415, 416
AsuHPI GGTGA 7 cut(s) 19, 70, 223, 719, 782, 1271, 1396
AsuII TTCGAA 1 cut(s) 392
AvaI CYCGRG 2 cut(s) 279, 414
AvaII GGWCC 7 cut(s) 36, 194, 263, 298, 305, 344, 483
BamHI GGATCC 1 cut(s) 986
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BbvCI CCTCAGC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 1333
BccI CCATC 7 cut(s) 332, 616, 695, 935, 998, 1105, 1250
BceAI ACGGC 1 cut(s) 834
BcgI CGANNNNNNTGC 2 cut(s) 377, 411
BciT130I CCWGG 2 cut(s) 302, 487
BciVI GTATCC 1 cut(s) 567
BcnI CCSGG 3 cut(s) 248, 415, 416
BcoDI GTCTC 2 cut(s) 138, 1422
BfaI CTAG 3 cut(s) 47, 639, 1128
BfuI GTATCC 1 cut(s) 567
BisI GCNGC 2 cut(s) 858, 1347
BlsI GCNGC 2 cut(s) 859, 1348
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 5 cut(s) 248, 302, 415, 416, 487
Bme18I GGWCC 7 cut(s) 36, 194, 263, 298, 305, 344, 483
BmeT110I CYCGRG 2 cut(s) 279, 414
BmiI GGNNCC 7 cut(s) 38, 245, 265, 299, 306, 848, 988
BmrFI CCNGG 5 cut(s) 248, 302, 415, 416, 487
BmsI GCATC 1 cut(s) 1207
BplI GAGNNNNNCTC 2 cut(s) 1027, 1059
BpmI CTGGAG 1 cut(s) 538
Bpu10I CCTNAGC 2 cut(s) 120, 879
Bpu14I TTCGAA 1 cut(s) 392
BpuEI CTTGAG 3 cut(s) 149, 428, 489
BpuMI CCSGG 3 cut(s) 248, 415, 416
BsaJI CCNNGG 5 cut(s) 23, 301, 414, 415, 1353
BsaWI WCCGGW 1 cut(s) 346
BsaXI ACNNNNNCTCC 2 cut(s) 100, 130
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 47, 240, 272, 614, 856
Bse1I ACTGG 2 cut(s) 669, 1158
BseBI CCWGG 2 cut(s) 302, 487
BseDI CCNNGG 5 cut(s) 23, 301, 414, 415, 1353
BseGI GGATG 2 cut(s) 33, 1089
BseLI CCNNNNNNNGG 6 cut(s) 24, 47, 240, 272, 614, 856
BseMII CTCAG 3 cut(s) 134, 888, 893
BseNI ACTGG 2 cut(s) 669, 1158
BseRI GAGGAG 3 cut(s) 108, 853, 1342
BseXI GCAGC 1 cut(s) 1333
BseYI CCCAGC 1 cut(s) 59
BshFI GGCC 6 cut(s) 96, 413, 542, 636, 1125, 1338
BsiHKCI CYCGRG 2 cut(s) 279, 414
BsiSI CCGG 3 cut(s) 247, 347, 415
BslFI GGGAC 5 cut(s) 263, 311, 318, 758, 1247
BslI CCNNNNNNNGG 6 cut(s) 24, 47, 240, 272, 614, 856
BsmAI GTCTC 2 cut(s) 138, 1422
BsmBI CGTCTC 1 cut(s) 1422
BsmFI GGGAC 5 cut(s) 263, 311, 318, 758, 1247
BsmI GAATGC 2 cut(s) 209, 400
BsnI GGCC 6 cut(s) 96, 413, 542, 636, 1125, 1338
BsoBI CYCGRG 2 cut(s) 279, 414
Bsp119I TTCGAA 1 cut(s) 392
Bsp143I GATC 5 cut(s) 378, 557, 724, 986, 1213
BspACI CCGC 5 cut(s) 34, 382, 857, 1055, 1067
BspANI GGCC 6 cut(s) 96, 413, 542, 636, 1125, 1338
BspCNI CTCAG 3 cut(s) 133, 887, 892
BspHI TCATGA 1 cut(s) 136
BspLI GGNNCC 7 cut(s) 38, 245, 265, 299, 306, 848, 988
BspPI GGATC 5 cut(s) 373, 732, 981, 994, 1221
BspT104I TTCGAA 1 cut(s) 392
BsrI ACTGG 2 cut(s) 669, 1158
BssECI CCNNGG 5 cut(s) 23, 301, 414, 415, 1353
BssMI GATC 5 cut(s) 378, 557, 724, 986, 1213
BssNAI GTATAC 1 cut(s) 1064
Bst1107I GTATAC 1 cut(s) 1064
Bst2UI CCWGG 2 cut(s) 302, 487
Bst4CI ACNGT 3 cut(s) 24, 434, 770
Bst6I CTCTTC 3 cut(s) 67, 233, 1028
BstBI TTCGAA 1 cut(s) 392
BstDEI CTNAG 7 cut(s) 120, 399, 582, 629, 874, 879, 1118
BstDSI CCRYGG 1 cut(s) 23
BstF5I GGATG 2 cut(s) 33, 1089
BstKTI GATC 5 cut(s) 381, 560, 727, 989, 1216
BstMAI GTCTC 2 cut(s) 138, 1422
BstMBI GATC 5 cut(s) 378, 557, 724, 986, 1213
BstMWI GCNNNNNNNGC 3 cut(s) 942, 1066, 1355
BstNI CCWGG 2 cut(s) 302, 487
BstNSI RCATGY 1 cut(s) 526
BstSCI CCNGG 5 cut(s) 246, 300, 413, 414, 485
BstV1I GCAGC 1 cut(s) 1333
BstX2I RGATCY 1 cut(s) 986
BstXI CCANNNNNNTGG 3 cut(s) 701, 1190, 1256
BstYI RGATCY 1 cut(s) 986
BstZ17I GTATAC 1 cut(s) 1064
BsuI GTATCC 1 cut(s) 567
BsuRI GGCC 6 cut(s) 96, 413, 542, 636, 1125, 1338
BtgI CCRYGG 1 cut(s) 23
BtgZI GCGATG 1 cut(s) 1184
BtsCI GGATG 2 cut(s) 33, 1089
CciI TCATGA 1 cut(s) 136
Cfr9I CCCGGG 1 cut(s) 414
CseI GACGC 1 cut(s) 131
CsiI ACCWGGT 1 cut(s) 485
Csp6I GTAC 2 cut(s) 430, 830
CviAII CATG 4 cut(s) 137, 235, 523, 1190
CviQI GTAC 2 cut(s) 430, 830
DdeI CTNAG 7 cut(s) 120, 399, 582, 629, 874, 879, 1118
DpnI GATC 5 cut(s) 380, 559, 726, 988, 1215
DpnII GATC 5 cut(s) 378, 557, 724, 986, 1213
Eam1104I CTCTTC 3 cut(s) 67, 233, 1028
EarI CTCTTC 3 cut(s) 67, 233, 1028
Eco47I GGWCC 7 cut(s) 36, 194, 263, 298, 305, 344, 483
Eco88I CYCGRG 2 cut(s) 279, 414
EcoO109I RGGNCCY 4 cut(s) 263, 483, 635, 1124
EcoRI GAATTC 1 cut(s) 1009
EcoRII CCWGG 2 cut(s) 300, 485
Esp3I CGTCTC 1 cut(s) 1422
FaeI CATG 4 cut(s) 140, 238, 526, 1193
FaqI GGGAC 5 cut(s) 263, 311, 318, 758, 1247
FatI CATG 4 cut(s) 136, 234, 522, 1189
FblI GTMKAC 2 cut(s) 1063, 1222
Fnu4HI GCNGC 2 cut(s) 858, 1347
FokI GGATG 2 cut(s) 40, 1076
Fsp4HI GCNGC 2 cut(s) 858, 1347
FspBI CTAG 3 cut(s) 47, 639, 1128
GluI GCNGC 2 cut(s) 858, 1347
GsaI CCCAGC 1 cut(s) 63
GsuI CTGGAG 1 cut(s) 538
HaeIII GGCC 6 cut(s) 96, 413, 542, 636, 1125, 1338
HapII CCGG 3 cut(s) 247, 347, 415
HgaI GACGC 1 cut(s) 131
Hin1II CATG 4 cut(s) 140, 238, 526, 1193
HincII GTYRAC 2 cut(s) 501, 1402
HindII GTYRAC 2 cut(s) 501, 1402
HinfI GANTC 7 cut(s) 75, 215, 389, 454, 773, 962, 1262
HpaII CCGG 3 cut(s) 247, 347, 415
HphI GGTGA 7 cut(s) 19, 70, 223, 719, 782, 1271, 1396
Hpy166II GTNNAC 7 cut(s) 344, 501, 1064, 1077, 1133, 1223, 1402
Hpy188I TCNGA 5 cut(s) 71, 202, 961, 1006, 1094
Hpy188III TCNNGA 4 cut(s) 137, 281, 458, 555
Hpy8I GTNNAC 7 cut(s) 344, 501, 1064, 1077, 1133, 1223, 1402
Hpy99I CGWCG 3 cut(s) 202, 539, 770
HpyCH4III ACNGT 3 cut(s) 24, 434, 770
HpyCH4IV ACGT 1 cut(s) 367
HpyCH4V TGCA 3 cut(s) 225, 532, 1107
HpyF10VI GCNNNNNNNGC 3 cut(s) 942, 1066, 1355
HpyF3I CTNAG 7 cut(s) 120, 399, 582, 629, 874, 879, 1118
HpySE526I ACGT 1 cut(s) 367
Hsp92II CATG 4 cut(s) 140, 238, 526, 1193
Kzo9I GATC 5 cut(s) 378, 557, 724, 986, 1213
LmnI GCTCC 3 cut(s) 89, 846, 1354
Lsp1109I GCAGC 1 cut(s) 1333
LweI GCATC 1 cut(s) 1207
MabI ACCWGGT 1 cut(s) 485
MaeI CTAG 3 cut(s) 47, 639, 1128
MaeII ACGT 1 cut(s) 367
MaeIII GTNAC 5 cut(s) 76, 229, 368, 761, 787
MalI GATC 5 cut(s) 380, 559, 726, 988, 1215
MboI GATC 5 cut(s) 378, 557, 724, 986, 1213
MboII GAAGA 6 cut(s) 84, 250, 682, 960, 1045, 1171
MflI RGATCY 1 cut(s) 986
MluCI AATT 7 cut(s) 11, 183, 778, 1009, 1226, 1373, 1395
MlyI GAGTC 1 cut(s) 84
MmeI TCCRAC 2 cut(s) 180, 1117
MroXI GAANNNNTTC 1 cut(s) 242
MseI TTAA 3 cut(s) 888, 1272, 1278
MslI CAYNNNNRTG 4 cut(s) 527, 699, 1188, 1254
MspI CCGG 3 cut(s) 247, 347, 415
MspR9I CCNGG 5 cut(s) 248, 302, 415, 416, 487
Mva1269I GAATGC 2 cut(s) 209, 400
MvaI CCWGG 2 cut(s) 302, 487
MwoI GCNNNNNNNGC 3 cut(s) 942, 1066, 1355
NciI CCSGG 3 cut(s) 248, 415, 416
NdeII GATC 5 cut(s) 378, 557, 724, 986, 1213
NlaIII CATG 4 cut(s) 140, 238, 526, 1193
NlaIV GGNNCC 7 cut(s) 38, 245, 265, 299, 306, 848, 988
NmeAIII GCCGAG 1 cut(s) 1334
NmuCI GTSAC 2 cut(s) 76, 229
NspI RCATGY 1 cut(s) 526
NspV TTCGAA 1 cut(s) 392
PagI TCATGA 1 cut(s) 136
PctI GAATGC 2 cut(s) 209, 400
PdmI GAANNNNTTC 1 cut(s) 242
PfeI GAWTC 6 cut(s) 215, 389, 454, 773, 962, 1262
PflFI GACNNNGTC 1 cut(s) 487
PflMI CCANNNNNTGG 1 cut(s) 614
PfoI TCCNGGA 1 cut(s) 246
PkrI GCNGC 2 cut(s) 859, 1348
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
PpuMI RGGWCCY 2 cut(s) 263, 483
Psp5II RGGWCCY 2 cut(s) 263, 483
Psp6I CCWGG 2 cut(s) 300, 485
PspFI CCCAGC 1 cut(s) 59
PspGI CCWGG 2 cut(s) 300, 485
PspN4I GGNNCC 7 cut(s) 38, 245, 265, 299, 306, 848, 988
PspPPI RGGWCCY 2 cut(s) 263, 483
PsuI RGATCY 1 cut(s) 986
PsyI GACNNNGTC 1 cut(s) 487
RsaI GTAC 2 cut(s) 431, 831
RsaNI GTAC 2 cut(s) 430, 830
RseI CAYNNNNRTG 4 cut(s) 527, 699, 1188, 1254
SaqAI TTAA 3 cut(s) 888, 1272, 1278
SatI GCNGC 2 cut(s) 858, 1347
Sau3AI GATC 5 cut(s) 378, 557, 724, 986, 1213
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 1 cut(s) 84
ScrFI CCNGG 5 cut(s) 248, 302, 415, 416, 487
SexAI ACCWGGT 1 cut(s) 485
SfaNI GCATC 1 cut(s) 1207
SfuI TTCGAA 1 cut(s) 392
SinI GGWCC 7 cut(s) 36, 194, 263, 298, 305, 344, 483
SmaI CCCGGG 1 cut(s) 416
SmiMI CAYNNNNRTG 4 cut(s) 527, 699, 1188, 1254
SmlI CTYRAG 3 cut(s) 164, 407, 504
SmoI CTYRAG 3 cut(s) 164, 407, 504
Sse9I AATT 7 cut(s) 11, 183, 778, 1009, 1226, 1373, 1395
SsiI CCGC 5 cut(s) 34, 382, 857, 1055, 1067
SspI AATATT 1 cut(s) 289
SspMI CTAG 3 cut(s) 47, 639, 1128
StyD4I CCNGG 5 cut(s) 246, 300, 413, 414, 485
TaaI ACNGT 3 cut(s) 24, 434, 770
TaiI ACGT 1 cut(s) 370
TaqI TCGA 3 cut(s) 392, 604, 1265
TaqII GACCGA 2 cut(s) 486, 945
TasI AATT 7 cut(s) 11, 183, 778, 1009, 1226, 1373, 1395
TatI WGTACW 1 cut(s) 429
TauI GCSGC 1 cut(s) 860
TfiI GAWTC 6 cut(s) 215, 389, 454, 773, 962, 1262
Tru1I TTAA 3 cut(s) 888, 1272, 1278
Tru9I TTAA 3 cut(s) 888, 1272, 1278
TseFI GTSAC 2 cut(s) 76, 229
TseI GCWGC 1 cut(s) 1346
Tsp45I GTSAC 2 cut(s) 76, 229
TspDTI ATGAA 8 cut(s) 17, 93, 251, 500, 879, 1002, 1377, 1407
TspGWI ACGGA 3 cut(s) 76, 186, 749
TspMI CCCGGG 1 cut(s) 414
Tth111I GACNNNGTC 1 cut(s) 487
Van91I CCANNNNNTGG 1 cut(s) 614
VpaK11BI GGWCC 7 cut(s) 36, 194, 263, 298, 305, 344, 483
XapI RAATTY 2 cut(s) 778, 1009
XceI RCATGY 1 cut(s) 526
XmaI CCCGGG 1 cut(s) 414
XmiI GTMKAC 2 cut(s) 1063, 1222
XmnI GAANNNNTTC 1 cut(s) 242
XspI CTAG 3 cut(s) 47, 639, 1128
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.