B3 domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 41 - 127 | 4.1e-10 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 45, 58 |
| AcsI | RAATTY | 2 cut(s) | 73, 180 |
| AcuI | CTGAAG | 1 cut(s) | 171 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 11 |
| AflIII | ACRYGT | 1 cut(s) | 270 |
| AgsI | TTSAA | 4 cut(s) | 64, 85, 97, 185 |
| AjnI | CCWGG | 2 cut(s) | 4, 384 |
| AluBI | AGCT | 1 cut(s) | 302 |
| AluI | AGCT | 1 cut(s) | 302 |
| AlwI | GGATC | 2 cut(s) | 45, 58 |
| AoxI | GGCC | 2 cut(s) | 206, 382 |
| ApoI | RAATTY | 2 cut(s) | 73, 180 |
| BamHI | GGATCC | 1 cut(s) | 50 |
| BbsI | GAAGAC | 1 cut(s) | 176 |
| BccI | CCATC | 1 cut(s) | 62 |
| BciT130I | CCWGG | 2 cut(s) | 6, 386 |
| BfmI | CTRYAG | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 2 cut(s) | 6, 386 |
| BmiI | GGNNCC | 1 cut(s) | 52 |
| BmrFI | CCNGG | 2 cut(s) | 6, 386 |
| BmsI | GCATC | 1 cut(s) | 348 |
| BpiI | GAAGAC | 1 cut(s) | 176 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 91, 123 |
| BsaJI | CCNNGG | 2 cut(s) | 5, 385 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 11 |
| Bse1I | ACTGG | 2 cut(s) | 199, 283 |
| BseBI | CCWGG | 2 cut(s) | 6, 386 |
| BseDI | CCNNGG | 2 cut(s) | 5, 385 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 11 |
| BseNI | ACTGG | 2 cut(s) | 199, 283 |
| BshFI | GGCC | 2 cut(s) | 208, 384 |
| BslFI | GGGAC | 1 cut(s) | 335 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 11 |
| BsmFI | GGGAC | 1 cut(s) | 335 |
| BsnI | GGCC | 2 cut(s) | 208, 384 |
| Bsp143I | GATC | 3 cut(s) | 50, 200, 259 |
| BspANI | GGCC | 2 cut(s) | 208, 384 |
| BspLI | GGNNCC | 1 cut(s) | 52 |
| BspPI | GGATC | 2 cut(s) | 45, 58 |
| BsrI | ACTGG | 2 cut(s) | 199, 283 |
| BssECI | CCNNGG | 2 cut(s) | 5, 385 |
| BssMI | GATC | 3 cut(s) | 50, 200, 259 |
| Bst2UI | CCWGG | 2 cut(s) | 6, 386 |
| Bst4CI | ACNGT | 3 cut(s) | 175, 226, 328 |
| Bst6I | CTCTTC | 1 cut(s) | 92 |
| BstKTI | GATC | 3 cut(s) | 53, 203, 262 |
| BstMBI | GATC | 3 cut(s) | 50, 200, 259 |
| BstNI | CCWGG | 2 cut(s) | 6, 386 |
| BstNSI | RCATGY | 1 cut(s) | 274 |
| BstSCI | CCNGG | 2 cut(s) | 4, 384 |
| BstSFI | CTRYAG | 1 cut(s) | 174 |
| BstV2I | GAAGAC | 1 cut(s) | 176 |
| BstX2I | RGATCY | 1 cut(s) | 50 |
| BstYI | RGATCY | 1 cut(s) | 50 |
| BsuRI | GGCC | 2 cut(s) | 208, 384 |
| BtsIMutI | CAGTG | 1 cut(s) | 324 |
| CviAII | CATG | 2 cut(s) | 204, 271 |
| CviJI | RGCY | 5 cut(s) | 107, 143, 208, 302, 384 |
| CviKI_1 | RGCY | 5 cut(s) | 107, 143, 208, 302, 384 |
| DpnI | GATC | 3 cut(s) | 52, 202, 261 |
| DpnII | GATC | 3 cut(s) | 50, 200, 259 |
| Eam1104I | CTCTTC | 1 cut(s) | 92 |
| EarI | CTCTTC | 1 cut(s) | 92 |
| Eco147I | AGGCCT | 1 cut(s) | 384 |
| Eco57I | CTGAAG | 1 cut(s) | 171 |
| EcoRI | GAATTC | 1 cut(s) | 73 |
| EcoRII | CCWGG | 2 cut(s) | 4, 384 |
| EcoT22I | ATGCAT | 1 cut(s) | 165 |
| FaeI | CATG | 2 cut(s) | 207, 274 |
| FaiI | YATR | 8 cut(s) | 79, 117, 146, 161, 165, 205, 272, 369 |
| FaqI | GGGAC | 1 cut(s) | 335 |
| FatI | CATG | 2 cut(s) | 203, 270 |
| HaeIII | GGCC | 2 cut(s) | 208, 384 |
| Hin1II | CATG | 2 cut(s) | 207, 274 |
| HincII | GTYRAC | 1 cut(s) | 276 |
| HindII | GTYRAC | 1 cut(s) | 276 |
| HinfI | GANTC | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 2 cut(s) | 236, 276 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 377 |
| Hpy188III | TCNNGA | 1 cut(s) | 185 |
| Hpy8I | GTNNAC | 2 cut(s) | 236, 276 |
| HpyAV | CCTTC | 3 cut(s) | 4, 146, 387 |
| HpyCH4III | ACNGT | 3 cut(s) | 175, 226, 328 |
| HpyCH4V | TGCA | 1 cut(s) | 163 |
| Hsp92II | CATG | 2 cut(s) | 207, 274 |
| Kzo9I | GATC | 3 cut(s) | 50, 200, 259 |
| LpnPI | CCDG | 4 cut(s) | 18, 180, 264, 371 |
| LweI | GCATC | 1 cut(s) | 348 |
| MaeIII | GTNAC | 2 cut(s) | 220, 226 |
| MalI | GATC | 3 cut(s) | 52, 202, 261 |
| MboI | GATC | 3 cut(s) | 50, 200, 259 |
| MboII | GAAGA | 2 cut(s) | 109, 181 |
| MflI | RGATCY | 1 cut(s) | 50 |
| MluCI | AATT | 3 cut(s) | 73, 126, 180 |
| MnlI | CCTC | 1 cut(s) | 19 |
| Mph1103I | ATGCAT | 1 cut(s) | 165 |
| MspR9I | CCNGG | 2 cut(s) | 6, 386 |
| MvaI | CCWGG | 2 cut(s) | 6, 386 |
| NdeII | GATC | 3 cut(s) | 50, 200, 259 |
| NlaIII | CATG | 2 cut(s) | 207, 274 |
| NlaIV | GGNNCC | 1 cut(s) | 52 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| NsiI | ATGCAT | 1 cut(s) | 165 |
| NspI | RCATGY | 1 cut(s) | 274 |
| PceI | AGGCCT | 1 cut(s) | 384 |
| PciI | ACATGT | 1 cut(s) | 270 |
| PfeI | GAWTC | 1 cut(s) | 34 |
| PflFI | GACNNNGTC | 1 cut(s) | 326 |
| PscI | ACATGT | 1 cut(s) | 270 |
| Psp6I | CCWGG | 2 cut(s) | 4, 384 |
| PspGI | CCWGG | 2 cut(s) | 4, 384 |
| PspN4I | GGNNCC | 1 cut(s) | 52 |
| PsuI | RGATCY | 1 cut(s) | 50 |
| PsyI | GACNNNGTC | 1 cut(s) | 326 |
| Sau3AI | GATC | 3 cut(s) | 50, 200, 259 |
| ScrFI | CCNGG | 2 cut(s) | 6, 386 |
| SetI | ASST | 5 cut(s) | 157, 249, 304, 355, 398 |
| SfaNI | GCATC | 1 cut(s) | 348 |
| SfcI | CTRYAG | 1 cut(s) | 174 |
| Sse9I | AATT | 3 cut(s) | 73, 126, 180 |
| SseBI | AGGCCT | 1 cut(s) | 384 |
| StuI | AGGCCT | 1 cut(s) | 384 |
| StyD4I | CCNGG | 2 cut(s) | 4, 384 |
| TaaI | ACNGT | 3 cut(s) | 175, 226, 328 |
| TaqI | TCGA | 1 cut(s) | 284 |
| TasI | AATT | 3 cut(s) | 73, 126, 180 |
| TfiI | GAWTC | 1 cut(s) | 34 |
| TscAI | CASTG | 1 cut(s) | 331 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspDTI | ATGAA | 2 cut(s) | 66, 356 |
| TspRI | CASTG | 1 cut(s) | 331 |
| Tth111I | GACNNNGTC | 1 cut(s) | 326 |
| XapI | RAATTY | 2 cut(s) | 73, 180 |
| XceI | RCATGY | 1 cut(s) | 274 |
| Zsp2I | ATGCAT | 1 cut(s) | 165 |