Rroxscaffold_1G00018380

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0001437
Physical Location & Seq
Reverse (-)
22589260 .. 22592820
3561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00018380.1

Sequence Viewer

Length: 1860 bp
ATGGCTAGTAGCTCCATAGTAGTCCTACTCTTCCCACTTTTAGCTCTAGCTCAATTATCTTCATTGGCAGCCGATAATTTTCTGAGCATAGATTGCGGGTCATCTGATTCCTACACCGACAAAAATTCGATCAACTGGGTTGGAGACGACGCCTTTGTTCAGAACGGCAAGTCTCAAGTGGTGCAGATCCCCAATGGAGTCTCTCAAGAAATGAGCACTTTGAGAGTGTTTACAACCAGGAAGAAAAACTGTTACTCCATTGATGCAGAAAAGGGAGCTCAGTTTCTTGTGCGTGGAAGTTTCTACTACGGAAACTATGACAAAAAATCAGCTCCTCCTTCCTTTGATGTTCTTTTGGATGGGAATTTTTTTGACAGAATTCAGACTACAGCTGAGGATGTTATTTATTTTGAAGCTATATATGTCGCAACAAGCGGCTCTATACAGCTATGTCTTGCTCAATCTAAGCCTAACCAGTTTCCATTTATATCCGCGATTGAGATCCGGGGCCTGGATCCAACAATGTACTCTCATTTTGAGTCGAACTATATGATGGTAAATACAAGGAGGGTTGCTTTTGGTGCAACTAAATCTATAAGGTATCCAGATGATGATTATGATCGTTATTGGGATCCATCAGGGGATGTCACCGGCATACTGAAGGTCACAAGTGATGCACCAGGAATTGATGGCATTGTGGAAGATCAGCCTCCAAAACTAGCTATGCAAACTGCAATAACTACCTCAAAAACATCACAACCATTGGGTATAATTGGCAATGGTCTTCCAAGTGCTGAAGTCCCCATTTACATCACCATGTTCTTCTCTGAAGTGAATCTACTTGATTCGTCGACTGATGTCAGATCCTTTCAGATTTTCATTGATGACAAGACTCCTTCAGATCCCATCATTCCCATCTATGGAGGTGTGACAGAAATGTACATCGCAAACAGGACCGGATCTTCGAAGACCTCAATTTCTCTGGTGGCCACCACTGATTCGACGCTGCCTCCTCTGATCAATGCCATGGAAGTTTACTATCTTCTAGGGCCACTAACAGAGGGAACAAATAGCAAAGATGTTGAAGGGTTGGCTGCATTGCAAGGAAAGTTCAGTATTCTACAGGAATGGACTGGAGACCCTTGCCTCCCATCTCCATATACATGGGACTGGGTCAATTGTACTACTGATGACACACCGCGAGTAACAGCACTGTATTTGAATGGCTATGGTCTAGCTGGGCAACTTCCAGACTTTAGTTCCATGGATGCTCTTGTCACAATAGACATGCACAACAACAGCCTGAGTGGAGCAATTCCTAGTTTTCTTGGCACCTTGCCCAATCTAAAAGAACTGAACTTAAGAGACAATAAACTGAGTGGACCAGTACCCTCCACAATATCAAAGAATACCAAGCTGAAGTTAGAGGATTCTGGCAATCCTAATCTATGTGCCTCTGGCGAGTCCTGTAAGACAATTGCTAGCAATGATAGCCCCTCTTCATCAGGCAGCAGTGGCACTAAGAAGAAAAGCAGCAAACTACCATTAATTCTTGGAATAGCAATTCCAGCTTTTGCGGCGTTCTGGGTTATTGTGGTAGTGTGTGTTTGTGTAGTAACTTCAAATAAGAGAAGAAAAGCAGCCGTCGGAGCAATCGGCACAGGACAAATTGGTGTGGCCAACATGCCTAATGGCGCTCAACAAGGGGTGCAAATGAACGGGCAAATGGCGGGTAAATTCGGAGAAGCTGTGATGAACCAGTACGAGGTCAACGTTGAGGAGCAGGCAACCCCAGACTATCAGCAACAAGTAACCCCAGAACATGTACAAGATCAAGACGATAGGCGATTGCATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like

Protein Analysis

619

Amino Acids

67.06

Weight (kDa)

4.72

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 30 - 347 5.8e-80 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1331
AccI GTMKAC 1 cut(s) 851
AccII CGCG 2 cut(s) 494, 1201
AciI CCGC 6 cut(s) 96, 435, 492, 1199, 1577, 1730
AclI AACGTT 1 cut(s) 1773
AclWI GGATC 9 cut(s) 181, 496, 509, 522, 626, 639, 858, 896, 967
AcoI YGGCCR 2 cut(s) 987, 1677
AcsI RAATTY 4 cut(s) 124, 364, 378, 1736
AcuI CTGAAG 5 cut(s) 680, 816, 849, 882, 1439
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 6 cut(s) 527, 941, 1183, 1389, 1763, 1827
AfiI CCNNNNNNNGG 3 cut(s) 511, 920, 1765
AflII CTTAAG 1 cut(s) 1360
AflIII ACRYGT 1 cut(s) 1822
AgsI TTSAA 4 cut(s) 413, 1085, 1222, 1623
AjnI CCWGG 3 cut(s) 236, 510, 679
Alw21I GWGCWC 2 cut(s) 218, 280
Alw26I GTCTC 5 cut(s) 138, 177, 205, 1131, 1359
AlwI GGATC 9 cut(s) 181, 496, 509, 522, 626, 639, 858, 896, 967
AoxI GGCC 4 cut(s) 508, 987, 1049, 1677
ApeKI GCWGC 6 cut(s) 68, 1006, 1094, 1509, 1533, 1640
ApoI RAATTY 4 cut(s) 124, 364, 378, 1736
ArsI GACNNNNNNTTYG 4 cut(s) 137, 169, 946, 978
AseI ATTAAT 1 cut(s) 1547
AspLEI GCGC 1 cut(s) 1697
AspS9I GGNCC 4 cut(s) 508, 954, 1049, 1382
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 2 cut(s) 640, 805
AsuII TTCGAA 1 cut(s) 965
AsuNHI GCTAGC 1 cut(s) 1481
AvaII GGWCC 2 cut(s) 954, 1382
BalI TGGCCA 2 cut(s) 989, 1679
BamHI GGATCC 2 cut(s) 514, 631
BanI GGYRCC 1 cut(s) 1331
BanII GRGCYC 1 cut(s) 280
BarI GAAGNNNNNNTAC 2 cut(s) 822, 854
BbsI GAAGAC 2 cut(s) 776, 974
Bbv12I GWGCWC 2 cut(s) 218, 280
BbvCI CCTCAGC 1 cut(s) 393
BbvI GCAGC 6 cut(s) 80, 993, 1081, 1521, 1545, 1652
BccI CCATC 7 cut(s) 353, 547, 643, 683, 914, 923, 1159
BceAI ACGGC 2 cut(s) 181, 1628
BciT130I CCWGG 3 cut(s) 238, 512, 681
BciVI GTATCC 1 cut(s) 612
BclI TGATCA 1 cut(s) 1017
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 5 cut(s) 138, 177, 205, 1131, 1359
BfaI CTAG 7 cut(s) 6, 47, 719, 1046, 1235, 1320, 1482
BfmI CTRYAG 2 cut(s) 387, 1121
BfoI RGCGCY 1 cut(s) 1698
BfrI CTTAAG 1 cut(s) 1360
BfuI GTATCC 1 cut(s) 612
BisI GCNGC 8 cut(s) 69, 436, 1007, 1095, 1510, 1534, 1578, 1641
BlsI GCNGC 8 cut(s) 70, 437, 1008, 1096, 1511, 1535, 1579, 1642
Bme1390I CCNGG 4 cut(s) 238, 506, 512, 681
Bme18I GGWCC 2 cut(s) 954, 1382
BmgT120I GGNCC 4 cut(s) 508, 954, 1049, 1382
BmiI GGNNCC 4 cut(s) 509, 516, 633, 1333
BmrFI CCNGG 4 cut(s) 238, 506, 512, 681
BmrI ACTGGG 2 cut(s) 145, 1180
BmsI GCATC 3 cut(s) 253, 664, 1258
BmtI GCTAGC 1 cut(s) 1485
BmuI ACTGGG 2 cut(s) 145, 1180
BoxI GACNNNNGTC 1 cut(s) 857
BpiI GAAGAC 2 cut(s) 776, 974
BpmI CTGGAG 1 cut(s) 1155
Bpu10I CCTNAGC 1 cut(s) 393
Bpu14I TTCGAA 1 cut(s) 965
BpuEI CTTGAG 2 cut(s) 159, 189
BpuMI CCSGG 1 cut(s) 506
BsaBI GATNNNNATC 2 cut(s) 500, 618
BsaHI GRCGYC 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 1131
BsaJI CCNNGG 3 cut(s) 505, 1026, 1263
BsaWI WCCGGW 1 cut(s) 956
BsaXI ACNNNNNCTCC 6 cut(s) 239, 269, 994, 1024, 1734, 1764
Bsc4I CCNNNNNNNGG 3 cut(s) 511, 920, 1765
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 6 cut(s) 140, 475, 1138, 1175, 1385, 1759
Bse3DI GCAATG 3 cut(s) 784, 1097, 1492
Bse8I GATNNNNATC 2 cut(s) 500, 618
BseBI CCWGG 3 cut(s) 238, 512, 681
BseDI CCNNGG 3 cut(s) 505, 1026, 1263
BseGI GGATG 4 cut(s) 364, 403, 649, 1273
BseJI GATNNNNATC 2 cut(s) 500, 618
BseLI CCNNNNNNNGG 3 cut(s) 511, 920, 1765
BseMI GCAATG 3 cut(s) 784, 1097, 1492
BseMII CTCAG 5 cut(s) 74, 293, 384, 1295, 1367
BseNI ACTGG 6 cut(s) 140, 475, 1138, 1175, 1385, 1759
BseRI GAGGAG 3 cut(s) 324, 1002, 1793
BseXI GCAGC 6 cut(s) 80, 993, 1081, 1521, 1545, 1652
BseYI CCCAGC 1 cut(s) 1238
BsgI GTGCAG 1 cut(s) 203
Bsh1236I CGCG 2 cut(s) 494, 1201
BshFI GGCC 4 cut(s) 510, 989, 1051, 1679
BshNI GGYRCC 1 cut(s) 1331
BsiHKAI GWGCWC 2 cut(s) 218, 280
BsiSI CCGG 3 cut(s) 505, 651, 957
BslFI GGGAC 2 cut(s) 785, 1181
BslI CCNNNNNNNGG 3 cut(s) 511, 920, 1765
BsmAI GTCTC 5 cut(s) 138, 177, 205, 1131, 1359
BsmBI CGTCTC 1 cut(s) 138
BsmFI GGGAC 2 cut(s) 785, 1181
BsnI GGCC 4 cut(s) 510, 989, 1051, 1679
Bso31I GGTCTC 1 cut(s) 1131
Bsp119I TTCGAA 1 cut(s) 965
Bsp1286I GDGCHC 2 cut(s) 218, 280
Bsp1407I TGTACA 2 cut(s) 939, 1825
Bsp19I CCATGG 2 cut(s) 1026, 1263
BspACI CCGC 6 cut(s) 96, 435, 492, 1199, 1577, 1730
BspANI GGCC 4 cut(s) 510, 989, 1051, 1679
BspCNI CTCAG 5 cut(s) 75, 292, 385, 1296, 1368
BspFNI CGCG 2 cut(s) 494, 1201
BspLI GGNNCC 4 cut(s) 509, 516, 633, 1333
BspOI GCTAGC 1 cut(s) 1485
BspPI GGATC 9 cut(s) 181, 496, 509, 522, 626, 639, 858, 896, 967
BspT104I TTCGAA 1 cut(s) 965
BspT107I GGYRCC 1 cut(s) 1331
BspTI CTTAAG 1 cut(s) 1360
BspTNI GGTCTC 1 cut(s) 1131
BsrDI GCAATG 3 cut(s) 784, 1097, 1492
BsrFI RCCGGY 1 cut(s) 650
BsrGI TGTACA 2 cut(s) 939, 1825
BsrI ACTGG 6 cut(s) 140, 475, 1138, 1175, 1385, 1759
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 3 cut(s) 505, 1026, 1263
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 2 cut(s) 1026, 1263
Bst2UI CCWGG 3 cut(s) 238, 512, 681
Bst4CI ACNGT 2 cut(s) 251, 1215
Bst6I CTCTTC 2 cut(s) 35, 1504
BstACI GRCGYC 1 cut(s) 150
BstAFI CTTAAG 1 cut(s) 1360
BstAPI GCANNNNNTGC 1 cut(s) 93
BstAUI TGTACA 2 cut(s) 939, 1825
BstBI TTCGAA 1 cut(s) 965
BstC8I GCNNGC 2 cut(s) 1483, 1785
BstDEI CTNAG 7 cut(s) 83, 279, 393, 465, 1304, 1376, 1521
BstDSI CCRYGG 2 cut(s) 1026, 1263
BstF5I GGATG 4 cut(s) 364, 403, 649, 1273
BstFNI CGCG 2 cut(s) 494, 1201
BstH2I RGCGCY 1 cut(s) 1698
BstHHI GCGC 1 cut(s) 1697
BstMAI GTCTC 5 cut(s) 138, 177, 205, 1131, 1359
BstMWI GCNNNNNNNGC 7 cut(s) 93, 581, 1491, 1515, 1568, 1577, 1649
BstNI CCWGG 3 cut(s) 238, 512, 681
BstNSI RCATGY 3 cut(s) 1291, 1687, 1826
BstPAI GACNNNNGTC 1 cut(s) 857
BstSCI CCNGG 4 cut(s) 236, 504, 510, 679
BstSFI CTRYAG 2 cut(s) 387, 1121
BstUI CGCG 2 cut(s) 494, 1201
BstV1I GCAGC 6 cut(s) 80, 993, 1081, 1521, 1545, 1652
BstV2I GAAGAC 2 cut(s) 776, 974
BstX2I RGATCY 7 cut(s) 186, 501, 514, 631, 863, 901, 959
BstXI CCANNNNNNTGG 1 cut(s) 1164
BstYI RGATCY 7 cut(s) 186, 501, 514, 631, 863, 901, 959
BsuI GTATCC 1 cut(s) 612
BsuRI GGCC 4 cut(s) 510, 989, 1051, 1679
BtgI CCRYGG 2 cut(s) 1026, 1263
BtgZI GCGATG 1 cut(s) 928
BtsCI GGATG 4 cut(s) 364, 403, 649, 1273
BtsI GCAGTG 1 cut(s) 1519
BtsIMutI CAGTG 3 cut(s) 993, 1211, 1519
Cac8I GCNNGC 2 cut(s) 1483, 1785
CfoI GCGC 1 cut(s) 1697
Cfr10I RCCGGY 1 cut(s) 650
Cfr13I GGNCC 4 cut(s) 508, 954, 1049, 1382
CseI GACGC 2 cut(s) 158, 1012
Csp6I GTAC 6 cut(s) 526, 940, 1182, 1388, 1762, 1826
CviAII CATG 7 cut(s) 817, 1027, 1164, 1264, 1288, 1684, 1823
CviQI GTAC 6 cut(s) 526, 940, 1182, 1388, 1762, 1826
DdeI CTNAG 7 cut(s) 83, 279, 393, 465, 1304, 1376, 1521
EaeI YGGCCR 2 cut(s) 987, 1677
Eam1104I CTCTTC 2 cut(s) 35, 1504
EarI CTCTTC 2 cut(s) 35, 1504
Ecl136II GAGCTC 1 cut(s) 278
Eco130I CCWWGG 2 cut(s) 1026, 1263
Eco24I GRGCYC 1 cut(s) 280
Eco31I GGTCTC 1 cut(s) 1131
Eco47I GGWCC 2 cut(s) 954, 1382
Eco53kI GAGCTC 1 cut(s) 278
Eco57I CTGAAG 5 cut(s) 680, 816, 849, 882, 1439
EcoICRI GAGCTC 1 cut(s) 278
EcoO109I RGGNCCY 1 cut(s) 508
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 3 cut(s) 236, 510, 679
EcoT14I CCWWGG 2 cut(s) 1026, 1263
EcoT38I GRGCYC 1 cut(s) 280
ErhI CCWWGG 2 cut(s) 1026, 1263
Esp3I CGTCTC 1 cut(s) 138
FaeI CATG 7 cut(s) 820, 1030, 1167, 1267, 1291, 1687, 1826
FaqI GGGAC 2 cut(s) 785, 1181
FatI CATG 7 cut(s) 816, 1026, 1163, 1263, 1287, 1683, 1822
FauI CCCGC 2 cut(s) 89, 1723
FbaI TGATCA 1 cut(s) 1017
FblI GTMKAC 1 cut(s) 851
Fnu4HI GCNGC 8 cut(s) 69, 436, 1007, 1095, 1510, 1534, 1578, 1641
FokI GGATG 4 cut(s) 371, 410, 656, 1280
FriOI GRGCYC 1 cut(s) 280
Fsp4HI GCNGC 8 cut(s) 69, 436, 1007, 1095, 1510, 1534, 1578, 1641
FspBI CTAG 7 cut(s) 6, 47, 719, 1046, 1235, 1320, 1482
GlaI GCGC 1 cut(s) 1696
GluI GCNGC 8 cut(s) 69, 436, 1007, 1095, 1510, 1534, 1578, 1641
GsaI CCCAGC 1 cut(s) 1242
GsuI CTGGAG 1 cut(s) 1155
HaeII RGCGCY 1 cut(s) 1698
HaeIII GGCC 4 cut(s) 510, 989, 1051, 1679
HapII CCGG 3 cut(s) 505, 651, 957
HgaI GACGC 2 cut(s) 158, 1012
HhaI GCGC 1 cut(s) 1697
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 7 cut(s) 820, 1030, 1167, 1267, 1291, 1687, 1826
Hin6I GCGC 1 cut(s) 1695
HinP1I GCGC 1 cut(s) 1695
HincII GTYRAC 2 cut(s) 852, 1771
HindII GTYRAC 2 cut(s) 852, 1771
HinfI GANTC 9 cut(s) 107, 198, 539, 835, 845, 892, 998, 1430, 1463
HpaII CCGG 3 cut(s) 505, 651, 957
HphI GGTGA 2 cut(s) 640, 805
Hpy166II GTNNAC 5 cut(s) 231, 852, 1036, 1382, 1771
Hpy188III TCNNGA 4 cut(s) 206, 605, 1250, 1835
Hpy8I GTNNAC 5 cut(s) 231, 852, 1036, 1382, 1771
Hpy99I CGWCG 4 cut(s) 152, 853, 1006, 1649
HpyAV CCTTC 4 cut(s) 348, 655, 906, 1079
HpyCH4III ACNGT 2 cut(s) 251, 1215
HpyCH4IV ACGT 1 cut(s) 1773
HpyF10VI GCNNNNNNNGC 7 cut(s) 93, 581, 1491, 1515, 1568, 1577, 1649
HpyF3I CTNAG 7 cut(s) 83, 279, 393, 465, 1304, 1376, 1521
HpySE526I ACGT 1 cut(s) 1773
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 7 cut(s) 820, 1030, 1167, 1267, 1291, 1687, 1826
HspAI GCGC 1 cut(s) 1695
Ksp22I TGATCA 1 cut(s) 1017
LmnI GCTCC 6 cut(s) 17, 275, 337, 1310, 1649, 1780
Lsp1109I GCAGC 6 cut(s) 80, 993, 1081, 1521, 1545, 1652
LweI GCATC 3 cut(s) 253, 664, 1258
MaeI CTAG 7 cut(s) 6, 47, 719, 1046, 1235, 1320, 1482
MaeII ACGT 1 cut(s) 1773
MaeIII GTNAC 8 cut(s) 251, 646, 664, 928, 1204, 1276, 1615, 1810
MfeI CAATTG 2 cut(s) 1177, 1476
MflI RGATCY 7 cut(s) 186, 501, 514, 631, 863, 901, 959
MhlI GDGCHC 2 cut(s) 218, 280
MlsI TGGCCA 2 cut(s) 989, 1679
MluNI TGGCCA 2 cut(s) 989, 1679
MlyI GAGTC 4 cut(s) 207, 548, 886, 1472
MmeI TCCRAC 3 cut(s) 121, 542, 1627
Mox20I TGGCCA 2 cut(s) 989, 1679
MscI TGGCCA 2 cut(s) 989, 1679
MseI TTAA 2 cut(s) 1361, 1547
MslI CAYNNNNRTG 2 cut(s) 815, 1162
Msp20I TGGCCA 2 cut(s) 989, 1679
MspA1I CMGCKG 1 cut(s) 392
MspCI CTTAAG 1 cut(s) 1360
MspI CCGG 3 cut(s) 505, 651, 957
MspR9I CCNGG 4 cut(s) 238, 506, 512, 681
MunI CAATTG 2 cut(s) 1177, 1476
MvaI CCWGG 3 cut(s) 238, 512, 681
MvnI CGCG 2 cut(s) 494, 1201
MwoI GCNNNNNNNGC 7 cut(s) 93, 581, 1491, 1515, 1568, 1577, 1649
NciI CCSGG 1 cut(s) 506
NcoI CCATGG 2 cut(s) 1026, 1263
NheI GCTAGC 1 cut(s) 1481
NlaIII CATG 7 cut(s) 820, 1030, 1167, 1267, 1291, 1687, 1826
NlaIV GGNNCC 4 cut(s) 509, 516, 633, 1333
NmuCI GTSAC 4 cut(s) 646, 664, 928, 1276
NspI RCATGY 3 cut(s) 1291, 1687, 1826
NspV TTCGAA 1 cut(s) 965
PciI ACATGT 1 cut(s) 1822
PcsI WCGNNNNNNNCGW 1 cut(s) 1770
PfeI GAWTC 5 cut(s) 107, 835, 845, 998, 1430
PflFI GACNNNGTC 1 cut(s) 1172
PkrI GCNGC 8 cut(s) 70, 437, 1008, 1096, 1511, 1535, 1579, 1642
PleI GAGTC 4 cut(s) 206, 547, 886, 1471
PpsI GAGTC 4 cut(s) 206, 547, 886, 1471
PscI ACATGT 1 cut(s) 1822
PshAI GACNNNNGTC 1 cut(s) 857
PshBI ATTAAT 1 cut(s) 1547
Psp124BI GAGCTC 1 cut(s) 280
Psp1406I AACGTT 1 cut(s) 1773
Psp6I CCWGG 3 cut(s) 236, 510, 679
PspFI CCCAGC 1 cut(s) 1238
PspGI CCWGG 3 cut(s) 236, 510, 679
PspN4I GGNNCC 4 cut(s) 509, 516, 633, 1333
PspPI GGNCC 4 cut(s) 508, 954, 1049, 1382
PsuI RGATCY 7 cut(s) 186, 501, 514, 631, 863, 901, 959
PsyI GACNNNGTC 1 cut(s) 1172
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 6 cut(s) 527, 941, 1183, 1389, 1763, 1827
RsaNI GTAC 6 cut(s) 526, 940, 1182, 1388, 1762, 1826
RseI CAYNNNNRTG 2 cut(s) 815, 1162
SacI GAGCTC 1 cut(s) 280
SalI GTCGAC 1 cut(s) 850
SaqAI TTAA 2 cut(s) 1361, 1547
SatI GCNGC 8 cut(s) 69, 436, 1007, 1095, 1510, 1534, 1578, 1641
Sau96I GGNCC 4 cut(s) 508, 954, 1049, 1382
SchI GAGTC 4 cut(s) 207, 548, 886, 1472
ScrFI CCNGG 4 cut(s) 238, 506, 512, 681
SduI GDGCHC 2 cut(s) 218, 280
SfaNI GCATC 3 cut(s) 253, 664, 1258
SfcI CTRYAG 2 cut(s) 387, 1121
SfuI TTCGAA 1 cut(s) 965
SinI GGWCC 2 cut(s) 954, 1382
SmiMI CAYNNNNRTG 2 cut(s) 815, 1162
SmlI CTYRAG 3 cut(s) 174, 204, 1360
SmoI CTYRAG 3 cut(s) 174, 204, 1360
SsiI CCGC 6 cut(s) 96, 435, 492, 1199, 1577, 1730
SspMI CTAG 7 cut(s) 6, 47, 719, 1046, 1235, 1320, 1482
SstI GAGCTC 1 cut(s) 280
StyD4I CCNGG 4 cut(s) 236, 504, 510, 679
StyI CCWWGG 2 cut(s) 1026, 1263
TaaI ACNGT 2 cut(s) 251, 1215
TaiI ACGT 1 cut(s) 1776
TaqI TCGA 5 cut(s) 128, 542, 851, 965, 1001
TatI WGTACW 4 cut(s) 525, 939, 1181, 1825
TauI GCSGC 2 cut(s) 438, 1580
TfiI GAWTC 5 cut(s) 107, 835, 845, 998, 1430
Tru1I TTAA 2 cut(s) 1361, 1547
Tru9I TTAA 2 cut(s) 1361, 1547
TscAI CASTG 3 cut(s) 1000, 1218, 1519
TseFI GTSAC 4 cut(s) 646, 664, 928, 1276
TseI GCWGC 6 cut(s) 68, 1006, 1094, 1509, 1533, 1640
Tsp45I GTSAC 4 cut(s) 646, 664, 928, 1276
TspDTI ATGAA 5 cut(s) 51, 868, 1491, 1730, 1769
TspGWI ACGGA 1 cut(s) 324
TspRI CASTG 3 cut(s) 1000, 1218, 1519
Tth111I GACNNNGTC 1 cut(s) 1172
Vha464I CTTAAG 1 cut(s) 1360
VpaK11BI GGWCC 2 cut(s) 954, 1382
VspI ATTAAT 1 cut(s) 1547
XapI RAATTY 4 cut(s) 124, 364, 378, 1736
XceI RCATGY 3 cut(s) 1291, 1687, 1826
XmiI GTMKAC 1 cut(s) 851
XspI CTAG 7 cut(s) 6, 47, 719, 1046, 1235, 1320, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.