Rorug01G0446900

Carbohydrate-binding protein of the ER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000165
Physical Location & Seq
Reverse (-)
54256708 .. 54258222
1515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0446900.1

Sequence Viewer

Length: 1101 bp
ATGACGCAAAAGCTTAGTGCACGCATTCGAAAATTTATTTCTTGTACTGCGTCATCAAGACCCATCGGCACACCAAATTCTTCAATGGGAGTGGATGTAACAGAAGAATACGCAAATGCCTTCCGCACCGAATCCTACCTCGACTTTTGGACACGTGTCGTCACGCTATCCAATGCTGATTCCACCGGCTCCAAGCTTATTCAAATGGAGTCGACAACTGCGGCTCGGCTCCCATCCTATCGGCTCTTCGTGGAGCATCTTTTGGATCCGGATCAAACCATGATTGCTCGGATCTTGGCACTGACCCGAAACCACCCAAAGAACCATGCACTTCTATCCGACTATTTTACCCAAACCGCAGATGCTTCCGCCCTGTGTGGTCTCCTACTAAAAGATATCGACCGTACACGTGTTAAATACCGTTCCATCAGAACTACACTTCAGTCTCTAAATAACTGTATAGCTCCTACGACACTAAACCAACTAACCAAATTCTCTATTGTTTTATCTCCCAAACGAATTCAAAGTATTCAAGTCAGATGCTCTGATTTGCTGAAACGGCTCGAGTTAACTCGCAATAAGACTCGAGCTAAGCTAAGGCTCACAAGCAAATTCCAAACCGGCTCGGCTATCATCTTGGTGGCAGTAACGACTACACTAAGTGTAATTGTTGTCACGCATGCACTTGCACTAGTTGTAGCTGCACCAACTCTTATAGCAACCTCACTCGACTTGGCTTCGTCAAGGAGACTAGCTAGGATGGCGGCTCAGCTCGATGCGGCTACCAAGGGAGCTTACATAGTAAACAGGGATTTGGAGACGGTGAGCCGGCTCGTTGCTCGGCTAAACGATGAGCTTGAGCACATGCGCGGAATGGTTCAGTTTTGGGTGGAGCGCGGCGAGGAGGACTGGCTCCAAGCCGGCGGCGAAGTGGCACGCCAGCTGAAGAAAAATGATTGTAGCTTTAGGCAGCAGCTAGATGAGCTGGAGGAGCATTTGTATCTGTGTTTCATGACTATAAACCGGGCTAGAAATCTTGTAGTGAAGGAGATTCTAGATCCTGGTCAGACCACCAATTCACATACCACATTAGCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Malectin_like

Protein Analysis

366

Amino Acids

41.03

Weight (kDa)

9.56

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF677 PF05055 70 - 351 2e-13 Protein of unknown function (DUF677)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 212
AccII CGCG 2 cut(s) 870, 897
AccIII TCCGGA 1 cut(s) 268
AciI CCGC 9 cut(s) 124, 221, 357, 369, 764, 779, 870, 897, 924
AclWI GGATC 5 cut(s) 260, 273, 279, 299, 1052
AcsI RAATTY 5 cut(s) 32, 76, 491, 519, 611
AcuI CTGAAG 2 cut(s) 425, 965
AcvI CACGTG 2 cut(s) 155, 410
AdeI CACNNNGTG 1 cut(s) 662
AfaI GTAC 2 cut(s) 46, 406
AflIII ACRYGT 4 cut(s) 152, 154, 407, 409
AgsI TTSAA 4 cut(s) 84, 203, 524, 533
AhlI ACTAGT 1 cut(s) 691
AjnI CCWGG 1 cut(s) 1060
Alw21I GWGCWC 2 cut(s) 22, 864
Alw26I GTCTC 4 cut(s) 386, 450, 742, 812
Alw44I GTGCAC 1 cut(s) 18
AlwI GGATC 5 cut(s) 260, 273, 279, 299, 1052
Ama87I CYCGRG 2 cut(s) 563, 585
Aor13HI TCCGGA 1 cut(s) 268
ApaLI GTGCAC 1 cut(s) 18
ApeKI GCWGC 3 cut(s) 701, 970, 973
ApoI RAATTY 5 cut(s) 32, 76, 491, 519, 611
AspLEI GCGC 2 cut(s) 870, 897
AsuC2I CCSGG 1 cut(s) 1025
AsuHPI GGTGA 1 cut(s) 835
AsuII TTCGAA 1 cut(s) 28
AvaI CYCGRG 2 cut(s) 563, 585
BaeGI GKGCMC 1 cut(s) 22
BamHI GGATCC 1 cut(s) 265
BbrPI CACGTG 2 cut(s) 155, 410
Bbv12I GWGCWC 2 cut(s) 22, 864
BbvI GCAGC 3 cut(s) 688, 982, 985
BccI CCATC 4 cut(s) 71, 241, 434, 754
BceAI ACGGC 1 cut(s) 575
BciT130I CCWGG 1 cut(s) 1062
BcnI CCSGG 1 cut(s) 1025
BcoDI GTCTC 4 cut(s) 386, 450, 742, 812
BcuI ACTAGT 1 cut(s) 691
BfaI CTAG 6 cut(s) 692, 752, 756, 977, 1029, 1055
BisI GCNGC 8 cut(s) 222, 702, 765, 780, 898, 925, 971, 974
BlpI GCTNAGC 2 cut(s) 591, 768
BlsI GCNGC 8 cut(s) 223, 703, 766, 781, 899, 926, 972, 975
Bme1390I CCNGG 2 cut(s) 1025, 1062
BmeT110I CYCGRG 2 cut(s) 563, 585
BmiI GGNNCC 4 cut(s) 190, 230, 267, 914
BmrFI CCNGG 2 cut(s) 1025, 1062
BmsI GCATC 4 cut(s) 265, 352, 530, 766
BoxI GACNNNNGTC 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 1007
Bpu10I CCTNAGC 1 cut(s) 596
Bpu1102I GCTNAGC 2 cut(s) 591, 768
Bpu14I TTCGAA 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 878
BpuMI CCSGG 1 cut(s) 1025
BsaAI YACGTR 2 cut(s) 155, 410
BsaBI GATNNNNATC 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 386
BsaJI CCNNGG 1 cut(s) 786
BsaWI WCCGGW 1 cut(s) 268
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 983, 1013
Bse118I RCCGGY 4 cut(s) 185, 620, 828, 920
Bse1I ACTGG 1 cut(s) 914
Bse3DI GCAATG 1 cut(s) 1101
Bse8I GATNNNNATC 1 cut(s) 270
BseAI TCCGGA 1 cut(s) 268
BseBI CCWGG 1 cut(s) 1062
BseDI CCNNGG 1 cut(s) 786
BseGI GGATG 3 cut(s) 100, 233, 765
BseJI GATNNNNATC 1 cut(s) 270
BseMI GCAATG 1 cut(s) 1101
BseMII CTCAG 1 cut(s) 782
BseNI ACTGG 1 cut(s) 914
BseRI GAGGAG 2 cut(s) 917, 1004
BseSI GKGCMC 1 cut(s) 22
BseXI GCAGC 3 cut(s) 688, 982, 985
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 2 cut(s) 870, 897
Bsh1285I CGRYCG 1 cut(s) 403
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 2 cut(s) 22, 864
BsiHKCI CYCGRG 2 cut(s) 563, 585
BsiSI CCGG 6 cut(s) 186, 269, 621, 829, 921, 1024
BsmAI GTCTC 4 cut(s) 386, 450, 742, 812
BsmBI CGTCTC 1 cut(s) 812
BsmI GAATGC 1 cut(s) 24
Bso31I GGTCTC 1 cut(s) 386
BsoBI CYCGRG 2 cut(s) 563, 585
Bsp119I TTCGAA 1 cut(s) 28
Bsp1286I GDGCHC 2 cut(s) 22, 864
Bsp13I TCCGGA 1 cut(s) 268
Bsp143I GATC 4 cut(s) 265, 271, 291, 1057
Bsp1720I GCTNAGC 2 cut(s) 591, 768
BspACI CCGC 9 cut(s) 124, 221, 357, 369, 764, 779, 870, 897, 924
BspCNI CTCAG 1 cut(s) 781
BspEI TCCGGA 1 cut(s) 268
BspFNI CGCG 2 cut(s) 870, 897
BspHI TCATGA 1 cut(s) 1011
BspLI GGNNCC 4 cut(s) 190, 230, 267, 914
BspPI GGATC 5 cut(s) 260, 273, 279, 299, 1052
BspQI GCTCTTC 1 cut(s) 251
BspT104I TTCGAA 1 cut(s) 28
BspTNI GGTCTC 1 cut(s) 386
BsrDI GCAATG 1 cut(s) 1101
BsrFI RCCGGY 4 cut(s) 185, 620, 828, 920
BsrI ACTGG 1 cut(s) 914
BssAI RCCGGY 4 cut(s) 185, 620, 828, 920
BssECI CCNNGG 1 cut(s) 786
BssMI GATC 4 cut(s) 265, 271, 291, 1057
BssT1I CCWWGG 1 cut(s) 786
Bst2UI CCWGG 1 cut(s) 1062
Bst4CI ACNGT 4 cut(s) 404, 422, 458, 823
Bst6I CTCTTC 1 cut(s) 251
BstBAI YACGTR 2 cut(s) 155, 410
BstBI TTCGAA 1 cut(s) 28
BstC8I GCNNGC 6 cut(s) 22, 681, 830, 922, 937, 941
BstDEI CTNAG 5 cut(s) 14, 591, 596, 659, 768
BstF5I GGATG 3 cut(s) 100, 233, 765
BstFNI CGCG 2 cut(s) 870, 897
BstHHI GCGC 2 cut(s) 870, 897
BstKTI GATC 4 cut(s) 268, 274, 294, 1060
BstMAI GTCTC 4 cut(s) 386, 450, 742, 812
BstMBI GATC 4 cut(s) 265, 271, 291, 1057
BstMCI CGRYCG 1 cut(s) 403
BstMWI GCNNNNNNNGC 4 cut(s) 559, 761, 982, 991
BstNI CCWGG 1 cut(s) 1062
BstNSI RCATGY 2 cut(s) 683, 868
BstPAI GACNNNNGTC 1 cut(s) 155
BstSCI CCNGG 2 cut(s) 1023, 1060
BstSLI GKGCMC 1 cut(s) 22
BstUI CGCG 2 cut(s) 870, 897
BstV1I GCAGC 3 cut(s) 688, 982, 985
BstX2I RGATCY 3 cut(s) 265, 291, 1057
BstYI RGATCY 3 cut(s) 265, 291, 1057
BtsCI GGATG 3 cut(s) 100, 233, 765
BtsIMutI CAGTG 1 cut(s) 299
Cac8I GCNNGC 6 cut(s) 22, 681, 830, 922, 937, 941
CciI TCATGA 1 cut(s) 1011
CfoI GCGC 2 cut(s) 870, 897
Cfr10I RCCGGY 4 cut(s) 185, 620, 828, 920
CseI GACGC 2 cut(s) 13, 39
Csp6I GTAC 2 cut(s) 45, 405
CspCI CAANNNNNGTGG 2 cut(s) 72, 107
CviAII CATG 5 cut(s) 280, 326, 680, 865, 1012
CviQI GTAC 2 cut(s) 45, 405
DdeI CTNAG 5 cut(s) 14, 591, 596, 659, 768
DpnI GATC 4 cut(s) 267, 273, 293, 1059
DpnII GATC 4 cut(s) 265, 271, 291, 1057
DraIII CACNNNGTG 1 cut(s) 662
Eam1104I CTCTTC 1 cut(s) 251
EarI CTCTTC 1 cut(s) 251
EciI GGCGGA 1 cut(s) 358
Eco130I CCWWGG 1 cut(s) 786
Eco31I GGTCTC 1 cut(s) 386
Eco32I GATATC 1 cut(s) 397
Eco57I CTGAAG 2 cut(s) 425, 965
Eco72I CACGTG 2 cut(s) 155, 410
Eco88I CYCGRG 2 cut(s) 563, 585
EcoRI GAATTC 1 cut(s) 519
EcoRII CCWGG 1 cut(s) 1060
EcoRV GATATC 1 cut(s) 397
EcoT14I CCWWGG 1 cut(s) 786
ErhI CCWWGG 1 cut(s) 786
Esp3I CGTCTC 1 cut(s) 812
FaeI CATG 5 cut(s) 283, 329, 683, 868, 1015
FatI CATG 5 cut(s) 279, 325, 679, 864, 1011
FblI GTMKAC 1 cut(s) 212
Fnu4HI GCNGC 8 cut(s) 222, 702, 765, 780, 898, 925, 971, 974
FokI GGATG 3 cut(s) 107, 220, 772
Fsp4HI GCNGC 8 cut(s) 222, 702, 765, 780, 898, 925, 971, 974
FspBI CTAG 6 cut(s) 692, 752, 756, 977, 1029, 1055
GlaI GCGC 2 cut(s) 869, 896
GluI GCNGC 8 cut(s) 222, 702, 765, 780, 898, 925, 971, 974
GsuI CTGGAG 1 cut(s) 1007
HapII CCGG 6 cut(s) 186, 269, 621, 829, 921, 1024
HgaI GACGC 2 cut(s) 13, 39
HhaI GCGC 2 cut(s) 870, 897
Hin1II CATG 5 cut(s) 283, 329, 683, 868, 1015
Hin6I GCGC 2 cut(s) 868, 895
HinP1I GCGC 2 cut(s) 868, 895
HincII GTYRAC 2 cut(s) 213, 570
HindII GTYRAC 2 cut(s) 213, 570
HindIII AAGCTT 2 cut(s) 11, 194
HinfI GANTC 5 cut(s) 131, 179, 209, 583, 1051
HpaI GTTAAC 1 cut(s) 570
HpaII CCGG 6 cut(s) 186, 269, 621, 829, 921, 1024
HphI GGTGA 1 cut(s) 835
Hpy166II GTNNAC 5 cut(s) 20, 213, 407, 570, 805
Hpy188I TCNGA 6 cut(s) 291, 340, 431, 539, 547, 1068
Hpy188III TCNNGA 4 cut(s) 57, 269, 1012, 1055
Hpy8I GTNNAC 5 cut(s) 20, 213, 407, 570, 805
HpyAV CCTTC 2 cut(s) 130, 1039
HpyCH4III ACNGT 4 cut(s) 404, 422, 458, 823
HpyCH4IV ACGT 2 cut(s) 154, 409
HpyCH4V TGCA 5 cut(s) 20, 329, 683, 689, 704
HpyF10VI GCNNNNNNNGC 4 cut(s) 559, 761, 982, 991
HpyF3I CTNAG 5 cut(s) 14, 591, 596, 659, 768
HpySE526I ACGT 2 cut(s) 154, 409
Hsp92II CATG 5 cut(s) 283, 329, 683, 868, 1015
HspAI GCGC 2 cut(s) 868, 895
Kpn2I TCCGGA 1 cut(s) 268
KroI GCCGGC 2 cut(s) 828, 920
KroNI GCCGGC 2 cut(s) 830, 922
KspAI GTTAAC 1 cut(s) 570
Kzo9I GATC 4 cut(s) 265, 271, 291, 1057
LguI GCTCTTC 1 cut(s) 251
LmnI GCTCC 8 cut(s) 194, 234, 253, 469, 791, 892, 918, 991
Lsp1109I GCAGC 3 cut(s) 688, 982, 985
LweI GCATC 4 cut(s) 265, 352, 530, 766
MaeI CTAG 6 cut(s) 692, 752, 756, 977, 1029, 1055
MaeII ACGT 2 cut(s) 154, 409
MaeIII GTNAC 4 cut(s) 97, 160, 646, 673
MalI GATC 4 cut(s) 267, 273, 293, 1059
MboI GATC 4 cut(s) 265, 271, 291, 1057
MboII GAAGA 4 cut(s) 72, 116, 238, 958
MflI RGATCY 3 cut(s) 265, 291, 1057
MhlI GDGCHC 2 cut(s) 22, 864
MluCI AATT 7 cut(s) 32, 76, 491, 519, 611, 666, 1075
MlyI GAGTC 2 cut(s) 218, 577
MmeI TCCRAC 1 cut(s) 363
MnlI CCTC 5 cut(s) 149, 733, 895, 898, 982
MroI TCCGGA 1 cut(s) 268
MroNI GCCGGC 2 cut(s) 828, 920
MseI TTAA 2 cut(s) 414, 569
MslI CAYNNNNRTG 1 cut(s) 638
MspA1I CMGCKG 1 cut(s) 943
MspI CCGG 6 cut(s) 186, 269, 621, 829, 921, 1024
MspR9I CCNGG 2 cut(s) 1025, 1062
Mva1269I GAATGC 1 cut(s) 24
MvaI CCWGG 1 cut(s) 1062
MvnI CGCG 2 cut(s) 870, 897
MwoI GCNNNNNNNGC 4 cut(s) 559, 761, 982, 991
NaeI GCCGGC 2 cut(s) 830, 922
NciI CCSGG 1 cut(s) 1025
NdeII GATC 4 cut(s) 265, 271, 291, 1057
NgoMIV GCCGGC 2 cut(s) 828, 920
NlaIII CATG 5 cut(s) 283, 329, 683, 868, 1015
NlaIV GGNNCC 4 cut(s) 190, 230, 267, 914
NmeAIII GCCGAG 3 cut(s) 205, 605, 820
NmuCI GTSAC 2 cut(s) 160, 673
NspI RCATGY 2 cut(s) 683, 868
NspV TTCGAA 1 cut(s) 28
PaeI GCATGC 1 cut(s) 683
PaeR7I CTCGAG 2 cut(s) 563, 585
PagI TCATGA 1 cut(s) 1011
PciSI GCTCTTC 1 cut(s) 251
PctI GAATGC 1 cut(s) 24
PdiI GCCGGC 2 cut(s) 830, 922
PfeI GAWTC 3 cut(s) 131, 179, 1051
PkrI GCNGC 8 cut(s) 223, 703, 766, 781, 899, 926, 972, 975
PleI GAGTC 2 cut(s) 217, 577
PmaCI CACGTG 2 cut(s) 155, 410
PmlI CACGTG 2 cut(s) 155, 410
PpsI GAGTC 2 cut(s) 217, 577
Ppu21I YACGTR 2 cut(s) 155, 410
PshAI GACNNNNGTC 1 cut(s) 155
Psp6I CCWGG 1 cut(s) 1060
PspCI CACGTG 2 cut(s) 155, 410
PspGI CCWGG 1 cut(s) 1060
PspN4I GGNNCC 4 cut(s) 190, 230, 267, 914
PspXI VCTCGAGB 2 cut(s) 563, 585
PsuI RGATCY 3 cut(s) 265, 291, 1057
PvuII CAGCTG 1 cut(s) 943
RsaI GTAC 2 cut(s) 46, 406
RsaNI GTAC 2 cut(s) 45, 405
RseI CAYNNNNRTG 1 cut(s) 638
SalI GTCGAC 1 cut(s) 211
SapI GCTCTTC 1 cut(s) 251
SaqAI TTAA 2 cut(s) 414, 569
SatI GCNGC 8 cut(s) 222, 702, 765, 780, 898, 925, 971, 974
Sau3AI GATC 4 cut(s) 265, 271, 291, 1057
SchI GAGTC 2 cut(s) 218, 577
ScrFI CCNGG 2 cut(s) 1025, 1062
SduI GDGCHC 2 cut(s) 22, 864
SfaNI GCATC 4 cut(s) 265, 352, 530, 766
Sfr274I CTCGAG 2 cut(s) 563, 585
SfuI TTCGAA 1 cut(s) 28
SlaI CTCGAG 2 cut(s) 563, 585
SmiMI CAYNNNNRTG 1 cut(s) 638
SmlI CTYRAG 3 cut(s) 563, 585, 857
SmoI CTYRAG 3 cut(s) 563, 585, 857
SpeI ACTAGT 1 cut(s) 691
SphI GCATGC 1 cut(s) 683
Sse9I AATT 7 cut(s) 32, 76, 491, 519, 611, 666, 1075
SsiI CCGC 9 cut(s) 124, 221, 357, 369, 764, 779, 870, 897, 924
SspMI CTAG 6 cut(s) 692, 752, 756, 977, 1029, 1055
StyD4I CCNGG 2 cut(s) 1023, 1060
StyI CCWWGG 1 cut(s) 786
TaaI ACNGT 4 cut(s) 404, 422, 458, 823
TaiI ACGT 2 cut(s) 157, 412
TaqI TCGA 8 cut(s) 28, 141, 212, 399, 564, 586, 729, 774
TasI AATT 7 cut(s) 32, 76, 491, 519, 611, 666, 1075
TatI WGTACW 1 cut(s) 44
TauI GCSGC 5 cut(s) 224, 767, 782, 900, 927
TfiI GAWTC 3 cut(s) 131, 179, 1051
Tru1I TTAA 2 cut(s) 414, 569
Tru9I TTAA 2 cut(s) 414, 569
TscAI CASTG 1 cut(s) 306
TseFI GTSAC 2 cut(s) 160, 673
TseI GCWGC 3 cut(s) 701, 970, 973
Tsp45I GTSAC 2 cut(s) 160, 673
TspDTI ATGAA 1 cut(s) 1000
TspRI CASTG 1 cut(s) 306
VneI GTGCAC 1 cut(s) 18
XapI RAATTY 5 cut(s) 32, 76, 491, 519, 611
XbaI TCTAGA 1 cut(s) 1054
XceI RCATGY 2 cut(s) 683, 868
XhoI CTCGAG 2 cut(s) 563, 585
XmiI GTMKAC 1 cut(s) 212
XspI CTAG 6 cut(s) 692, 752, 756, 977, 1029, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.