pycom06g00250

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
238792 .. 241729
2938 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00250.1

Sequence Viewer

Length: 2235 bp
ATGACGCCGCCACCGCCCTCCACTTACAACACACTGATCGATAGCTATGATATTTTCGATGATCACTTGGTTCAACCCTCCAATTCTCCTAGGTCTCGTGATGATTTCCCTAATGGGGATGGGGACCCCAGTCTTGAACCCTATGAGGGCATGGAATTCGACTCTGAACAGGCCTCCCGCATTTTCTATAATTCTTATGCCCGTCGAGTTGGTTTCAGCACCCGCGTCAGCGTCTACCAGCGCTCCCGTCGCGATGGCTCCATCATATGCCGCCAAATTGTTTGCTCCCGTGAAGGCTTTCGCCGCAACGGTGGTGAAAATAGGTCCAAGCGCCAGCGTACGGTTACTAGAGTTGGTTGTAAAGCACAGATGACCGTCAAGAAACAGACTTCAGGACGATGGGCTGTTTCAAAGCTGGTAAAGGAACATAACCATGAGCTTGTGCCTCCGGATAGGGTGCATTGTCTCCGTTCGCATAGGCATGTCTCTGGTCCTGCTCGAAGCCTGATTGATACCCTTCAAGCGGCTGGCATGGGTCCTAGTGGAGTGATGTCTGTGCTTATCAAGGAGTCAGGTGGAATTAATAACGTTGGTTTCACAAAAGTTGATTGCCAGAACTATATGAGTAGCAGCAGGCAGAGAACTCTTGGGAGTGGGGGTCAGGTCGTTTTTGACTATTTGAAGCGAATGCAGGTCGAGGATCCTGATTTCTTTTGTGCTGTCCAGGGTGATTTTGAGAACTCGACGGGAAACATTTTCTGGGCTGATGCAAATTCGAGAATGAATTATGACTACTTTGGAGACACTGTAACATTTGACACAACTTATAGGACAAACCGATACCGTGTCCCATTTGCCCCTTTTACCGGTTGGAATCATCACGGACAGCCTGTTTTATTTGGATGTGCATTACTCCTTAATGAGTCAGAGTCCTCATTTGTTTGGCTCTTCCAGACTTGGCTGGCTGCAATGTCTAGCCGCTATCCTGTCTCACTCACAACAGACCAGGATAGAATCATTCGAGCTGCTGTTGTGCATGTATTCCCCAGAACTCGCCACCGGTTTTGTAAATGGAACGTATTCAGAGAAGCTCAAGAGAAATTGTCCGACATATACCACTCACACCCCACTTTTGAAGCTGAATTGCTGAAGTGCATCAATGTGACAGAGACAATTGAGGAATTTGAGTCATGTTGGGAGTCCCTAGTTCAAAGATATGATCTTGGGGATAATGAGTGGCTTCAGTCAATATACGATGCTCGGCAACAATGGGTGCCAGTTTTTCTCCAGGATACATTTTTTGGTGAGATGTCAGCAACCCAAGGAAGTGATAATATAAACTCCTATTTTGATGGCTATATAAACGCATCAACTAGCATTCAGGTGCTGATAAAGCAGTATGAAAAAGCAATTGCCACTCGCCATGAAAAGGAAGTAAAGGCAGATTATGATACAATGAACAGCTCTCCAATTCTGAGGACGCCATCTCCAATGGAAAAACAAGCTGCCAAACTTTATACAAGGATAATATTCATGAAATTCCAAGAGGAATTAGTTGAGACGCTTGCTTATCCTGCAACTGTGGTCGATGATACAGGATCAGAAACCATGTATCGGGTGGCAAAATTTGGGGAAGACCACAAGATGCACTCTGTTAAGTTCAACGTTTTTGAGAAGAAAGCCCGTTGCAGCTGCCAATTGTTTGAGTTTTCAGGCATTATATGTAGGCACATATTAGCAGTCTTCCGAGTAACCAATGTTCTTACACTTCCATCACACTATATATTAAAACGTTGGACAAAAAAAGCCAAAAGTGGAGTTGTATGGGATGAGAACACTCTTGGATTGCCGAATGATTCTCAAGATTCCACTGCTGCTCGGTATGACAATCTACGCAGGGAAGCAATCAAATATGTAGAAGAAGGGGCTGAATCTGTGCATGTTTATAATGTGGCAATGGACGCTCTTCACGAAGCTGCAAATGAGGTTGCTGCAGCAAAGAAGCATGGTCTTGCAATTGCACAGAATACCCCAGTAAATTGCAGTCAGAAACTTCAGTCTTGTACCATGGACCAGGGCAAGAAAATTGAAAGGTTGGCAGCTGAGTTGGAAATTTCAAGTCAGCAATGTGAAGCATACAGAGAAAAGCTACTTGCCGTTTTGAAAGATATGGAAGAGCAGAAGTTAAAGATATCAGTAAATGTTCAGAATGTAAGGCTAAACTTAAAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

745

Amino Acids

84.98

Weight (kDa)

7.27

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 62 - 149 6.1e-31 FAR1 DNA-binding domain
MULE PF10551 270 - 361 9.8e-27 MULE transposase domain
SWIM PF04434 560 - 583 9.3e-09 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1947
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 1273
AccI GTMKAC 1 cut(s) 234
AccII CGCG 2 cut(s) 225, 252
AccIII TCCGGA 1 cut(s) 448
AciI CCGC 8 cut(s) 8, 14, 178, 223, 271, 304, 524, 979
AclI AACGTT 3 cut(s) 588, 1665, 1792
AclWI GGATC 3 cut(s) 695, 708, 1606
AcsI RAATTY 7 cut(s) 155, 772, 1181, 1538, 1625, 2112, 2229
AcuI CTGAAG 4 cut(s) 375, 1169, 1226, 2039
AcyI GRCGYC 2 cut(s) 5, 1481
AfaI GTAC 2 cut(s) 340, 2065
AfeI AGCGCT 1 cut(s) 242
AfiI CCNNNNNNNGG 7 cut(s) 115, 146, 340, 523, 866, 1429, 1614
AgeI ACCGGT 2 cut(s) 866, 1059
AjnI CCWGG 4 cut(s) 723, 1005, 1287, 2073
Alw26I GTCTC 7 cut(s) 99, 470, 490, 795, 994, 1163, 1553
AlwI GGATC 3 cut(s) 695, 708, 1606
AlwNI CAGNNNCTG 1 cut(s) 1387
Aor13HI TCCGGA 1 cut(s) 448
Aor51HI AGCGCT 1 cut(s) 242
AoxI GGCC 1 cut(s) 171
ApoI RAATTY 7 cut(s) 155, 772, 1181, 1538, 1625, 2112, 2229
AseI ATTAAT 1 cut(s) 582
AsiGI ACCGGT 2 cut(s) 866, 1059
Asp700I GAANNNNTTC 2 cut(s) 297, 1079
AspA2I CCTAGG 1 cut(s) 89
AspLEI GCGC 2 cut(s) 243, 333
AspS9I GGNCC 5 cut(s) 124, 324, 491, 536, 2071
AsuHPI GGTGA 3 cut(s) 326, 740, 1316
AvaII GGWCC 5 cut(s) 124, 324, 491, 536, 2071
AvrII CCTAGG 1 cut(s) 89
BamHI GGATCC 1 cut(s) 700
BanI GGYRCC 1 cut(s) 1273
BauI CACGAG 1 cut(s) 96
BbsI GAAGAC 2 cut(s) 1641, 1735
BccI CCATC 7 cut(s) 113, 248, 269, 393, 1346, 1492, 1780
BceAI ACGGC 1 cut(s) 2141
BcgI CGANNNNNNTGC 2 cut(s) 139, 173
BciT130I CCWGG 4 cut(s) 725, 1007, 1289, 2075
BciVI GTATCC 1 cut(s) 1285
BclI TGATCA 1 cut(s) 61
BcoDI GTCTC 7 cut(s) 99, 470, 490, 795, 994, 1163, 1553
BfaI CTAG 6 cut(s) 90, 348, 540, 975, 1205, 1374
BfmI CTRYAG 1 cut(s) 1992
BfoI RGCGCY 2 cut(s) 244, 334
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 1 cut(s) 1285
BlnI CCTAGG 1 cut(s) 89
Bme1390I CCNGG 4 cut(s) 725, 1007, 1289, 2075
Bme18I GGWCC 5 cut(s) 124, 324, 491, 536, 2071
BmgT120I GGNCC 5 cut(s) 124, 324, 491, 536, 2071
BmiI GGNNCC 6 cut(s) 125, 126, 259, 537, 702, 1275
BmrFI CCNGG 4 cut(s) 725, 1007, 1289, 2075
BmrI ACTGGG 2 cut(s) 123, 2027
BmsI GCATC 5 cut(s) 757, 1164, 1246, 1376, 1635
BmuI ACTGGG 2 cut(s) 123, 2027
BoxI GACNNNNGTC 1 cut(s) 129
BpiI GAAGAC 2 cut(s) 1641, 1735
BpmI CTGGAG 1 cut(s) 1271
BpuEI CTTGAG 2 cut(s) 1077, 1845
Bsa29I ATCGAT 1 cut(s) 39
BsaHI GRCGYC 2 cut(s) 5, 1481
BsaI GGTCTC 1 cut(s) 99
BsaJI CCNNGG 5 cut(s) 89, 724, 1321, 2067, 2074
BsaWI WCCGGW 3 cut(s) 448, 866, 1059
BsaXI ACNNNNNCTCC 8 cut(s) 227, 257, 643, 673, 792, 822, 1471, 1501
Bsc4I CCNNNNNNNGG 7 cut(s) 115, 146, 340, 523, 866, 1429, 1614
Bse118I RCCGGY 2 cut(s) 866, 1059
Bse1I ACTGG 3 cut(s) 129, 1277, 2033
Bse3DI GCAATG 3 cut(s) 975, 1962, 2132
BseAI TCCGGA 1 cut(s) 448
BseBI CCWGG 4 cut(s) 725, 1007, 1289, 2075
BseCI ATCGAT 1 cut(s) 39
BseDI CCNNGG 5 cut(s) 89, 724, 1321, 2067, 2074
BseGI GGATG 3 cut(s) 124, 908, 1834
BseLI CCNNNNNNNGG 7 cut(s) 115, 146, 340, 523, 866, 1429, 1614
BseMI GCAATG 3 cut(s) 975, 1962, 2132
BseMII CTCAG 2 cut(s) 1466, 2094
BseNI ACTGG 3 cut(s) 129, 1277, 2033
Bsh1236I CGCG 2 cut(s) 225, 252
BshFI GGCC 1 cut(s) 173
BshNI GGYRCC 1 cut(s) 1273
BshTI ACCGGT 2 cut(s) 866, 1059
BshVI ATCGAT 1 cut(s) 39
BsiSI CCGG 3 cut(s) 449, 867, 1060
BsiWI CGTACG 1 cut(s) 338
BslFI GGGAC 3 cut(s) 137, 833, 1186
BslI CCNNNNNNNGG 7 cut(s) 115, 146, 340, 523, 866, 1429, 1614
BsmAI GTCTC 7 cut(s) 99, 470, 490, 795, 994, 1163, 1553
BsmBI CGTCTC 1 cut(s) 1553
BsmFI GGGAC 3 cut(s) 137, 833, 1186
BsmI GAATGC 2 cut(s) 693, 1377
BsnI GGCC 1 cut(s) 173
Bso31I GGTCTC 1 cut(s) 99
Bsp13I TCCGGA 1 cut(s) 448
Bsp143I GATC 5 cut(s) 36, 61, 700, 1219, 1598
Bsp19I CCATGG 1 cut(s) 2067
Bsp68I TCGCGA 1 cut(s) 252
BspACI CCGC 8 cut(s) 8, 14, 178, 223, 271, 304, 524, 979
BspANI GGCC 1 cut(s) 173
BspCNI CTCAG 2 cut(s) 1467, 2095
BspDI ATCGAT 1 cut(s) 39
BspEI TCCGGA 1 cut(s) 448
BspFNI CGCG 2 cut(s) 225, 252
BspHI TCATGA 1 cut(s) 1533
BspLI GGNNCC 6 cut(s) 125, 126, 259, 537, 702, 1275
BspMAI CTGCAG 1 cut(s) 1996
BspMI ACCTGC 1 cut(s) 682
BspPI GGATC 3 cut(s) 695, 708, 1606
BspQI GCTCTTC 3 cut(s) 953, 1971, 2169
BspT107I GGYRCC 1 cut(s) 1273
BspTNI GGTCTC 1 cut(s) 99
BsrDI GCAATG 3 cut(s) 975, 1962, 2132
BsrFI RCCGGY 2 cut(s) 866, 1059
BsrI ACTGG 3 cut(s) 129, 1277, 2033
BssAI RCCGGY 2 cut(s) 866, 1059
BssECI CCNNGG 5 cut(s) 89, 724, 1321, 2067, 2074
BssMI GATC 5 cut(s) 36, 61, 700, 1219, 1598
BssNI GRCGYC 2 cut(s) 5, 1481
BssSI CACGAG 1 cut(s) 96
BssT1I CCWWGG 3 cut(s) 89, 1321, 2067
Bst2BI CACGAG 1 cut(s) 96
Bst2UI CCWGG 4 cut(s) 725, 1007, 1289, 2075
Bst4CI ACNGT 6 cut(s) 311, 343, 376, 808, 845, 1582
Bst6I CTCTTC 3 cut(s) 953, 1971, 2169
BstACI GRCGYC 2 cut(s) 5, 1481
BstC8I GCNNGC 5 cut(s) 335, 529, 635, 963, 1566
BstDEI CTNAG 2 cut(s) 1475, 2103
BstDSI CCRYGG 1 cut(s) 2067
BstF5I GGATG 3 cut(s) 124, 908, 1834
BstFNI CGCG 2 cut(s) 225, 252
BstH2I RGCGCY 2 cut(s) 244, 334
BstHHI GCGC 2 cut(s) 243, 333
BstKTI GATC 5 cut(s) 39, 64, 703, 1222, 1601
BstMAI GTCTC 7 cut(s) 99, 470, 490, 795, 994, 1163, 1553
BstMBI GATC 5 cut(s) 36, 61, 700, 1219, 1598
BstMWI GCNNNNNNNGC 6 cut(s) 13, 249, 303, 1393, 1574, 1961
BstNI CCWGG 4 cut(s) 725, 1007, 1289, 2075
BstNSI RCATGY 3 cut(s) 485, 1040, 1943
BstPAI GACNNNNGTC 1 cut(s) 129
BstSCI CCNGG 4 cut(s) 723, 1005, 1287, 2073
BstSFI CTRYAG 1 cut(s) 1992
BstUI CGCG 2 cut(s) 225, 252
BstV2I GAAGAC 2 cut(s) 1641, 1735
BstX2I RGATCY 1 cut(s) 700
BstYI RGATCY 1 cut(s) 700
Bsu15I ATCGAT 1 cut(s) 39
BsuI GTATCC 1 cut(s) 1285
BsuRI GGCC 1 cut(s) 173
BsuTUI ATCGAT 1 cut(s) 39
BtgI CCRYGG 1 cut(s) 2067
BtgZI GCGATG 1 cut(s) 267
BtsCI GGATG 3 cut(s) 124, 908, 1834
BtsI GCAGTG 1 cut(s) 1869
BtsIMutI CAGTG 3 cut(s) 32, 804, 1869
BtuMI TCGCGA 1 cut(s) 252
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 5 cut(s) 335, 529, 635, 963, 1566
CaiI CAGNNNCTG 1 cut(s) 1387
CciI TCATGA 1 cut(s) 1533
CfoI GCGC 2 cut(s) 243, 333
Cfr10I RCCGGY 2 cut(s) 866, 1059
Cfr13I GGNCC 5 cut(s) 124, 324, 491, 536, 2071
ClaI ATCGAT 1 cut(s) 39
CseI GACGC 6 cut(s) 13, 214, 220, 1489, 1570, 1970
Csp6I GTAC 2 cut(s) 339, 2064
CspAI ACCGGT 2 cut(s) 866, 1059
CspCI CAANNNNNGTGG 2 cut(s) 1046, 1081
CviQI GTAC 2 cut(s) 339, 2064
DdeI CTNAG 2 cut(s) 1475, 2103
DpnI GATC 5 cut(s) 38, 63, 702, 1221, 1600
DpnII GATC 5 cut(s) 36, 61, 700, 1219, 1598
Eam1104I CTCTTC 3 cut(s) 953, 1971, 2169
EarI CTCTTC 3 cut(s) 953, 1971, 2169
Eco130I CCWWGG 3 cut(s) 89, 1321, 2067
Eco147I AGGCCT 1 cut(s) 173
Eco31I GGTCTC 1 cut(s) 99
Eco32I GATATC 1 cut(s) 2193
Eco47I GGWCC 5 cut(s) 124, 324, 491, 536, 2071
Eco47III AGCGCT 1 cut(s) 242
Eco57I CTGAAG 4 cut(s) 375, 1169, 1226, 2039
EcoO109I RGGNCCY 2 cut(s) 124, 536
EcoRI GAATTC 1 cut(s) 155
EcoRII CCWGG 4 cut(s) 723, 1005, 1287, 2073
EcoRV GATATC 1 cut(s) 2193
EcoT14I CCWWGG 3 cut(s) 89, 1321, 2067
ErhI CCWWGG 3 cut(s) 89, 1321, 2067
Esp3I CGTCTC 1 cut(s) 1553
FaqI GGGAC 3 cut(s) 137, 833, 1186
FauI CCCGC 2 cut(s) 185, 230
FauNDI CATATG 1 cut(s) 266
FbaI TGATCA 1 cut(s) 61
FblI GTMKAC 1 cut(s) 234
FokI GGATG 3 cut(s) 131, 915, 1841
FspBI CTAG 6 cut(s) 90, 348, 540, 975, 1205, 1374
GlaI GCGC 2 cut(s) 242, 332
GsuI CTGGAG 1 cut(s) 1271
HaeII RGCGCY 2 cut(s) 244, 334
HaeIII GGCC 1 cut(s) 173
HapII CCGG 3 cut(s) 449, 867, 1060
HgaI GACGC 6 cut(s) 13, 214, 220, 1489, 1570, 1970
HhaI GCGC 2 cut(s) 243, 333
Hin1I GRCGYC 2 cut(s) 5, 1481
Hin6I GCGC 2 cut(s) 241, 331
HinP1I GCGC 2 cut(s) 241, 331
HpaII CCGG 3 cut(s) 449, 867, 1060
HphI GGTGA 3 cut(s) 326, 740, 1316
Hpy166II GTNNAC 1 cut(s) 235
Hpy188I TCNGA 9 cut(s) 166, 928, 1085, 1108, 1476, 1603, 1748, 2049, 2208
Hpy8I GTNNAC 1 cut(s) 235
Hpy99I CGWCG 3 cut(s) 207, 252, 748
HpyAV CCTTC 3 cut(s) 287, 527, 1916
HpyCH4III ACNGT 6 cut(s) 311, 343, 376, 808, 845, 1582
HpyCH4IV ACGT 4 cut(s) 588, 1077, 1665, 1792
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 249, 303, 1393, 1574, 1961
HpyF3I CTNAG 2 cut(s) 1475, 2103
HpySE526I ACGT 4 cut(s) 588, 1077, 1665, 1792
Hsp92I GRCGYC 2 cut(s) 5, 1481
HspAI GCGC 2 cut(s) 241, 331
KflI GGGWCCC 1 cut(s) 124
Kpn2I TCCGGA 1 cut(s) 448
Ksp22I TGATCA 1 cut(s) 61
Kzo9I GATC 5 cut(s) 36, 61, 700, 1219, 1598
LguI GCTCTTC 3 cut(s) 953, 1971, 2169
LmnI GCTCC 3 cut(s) 248, 263, 290
LweI GCATC 5 cut(s) 757, 1164, 1246, 1376, 1635
MaeI CTAG 6 cut(s) 90, 348, 540, 975, 1205, 1374
MaeII ACGT 4 cut(s) 588, 1077, 1665, 1792
MaeIII GTNAC 4 cut(s) 343, 808, 1162, 1750
MalI GATC 5 cut(s) 38, 63, 702, 1221, 1600
MboI GATC 5 cut(s) 36, 61, 700, 1219, 1598
MboII GAAGA 7 cut(s) 940, 1646, 1687, 1735, 1931, 1958, 2186
MfeI CAATTG 4 cut(s) 1173, 1410, 1697, 2016
MflI RGATCY 1 cut(s) 700
MlyI GAGTC 6 cut(s) 155, 578, 932, 938, 1196, 1208
MmeI TCCRAC 4 cut(s) 851, 1131, 1775, 2088
MroI TCCGGA 1 cut(s) 448
MroXI GAANNNNTTC 2 cut(s) 297, 1079
MseI TTAA 6 cut(s) 582, 918, 1656, 1787, 2186, 2225
MslI CAYNNNNRTG 4 cut(s) 432, 480, 1160, 1382
MspA1I CMGCKG 2 cut(s) 1692, 2102
MspI CCGG 3 cut(s) 449, 867, 1060
MspR9I CCNGG 4 cut(s) 725, 1007, 1289, 2075
MunI CAATTG 4 cut(s) 1173, 1410, 1697, 2016
Mva1269I GAATGC 2 cut(s) 693, 1377
MvaI CCWGG 4 cut(s) 725, 1007, 1289, 2075
MvnI CGCG 2 cut(s) 225, 252
MwoI GCNNNNNNNGC 6 cut(s) 13, 249, 303, 1393, 1574, 1961
NcoI CCATGG 1 cut(s) 2067
NdeI CATATG 1 cut(s) 266
NdeII GATC 5 cut(s) 36, 61, 700, 1219, 1598
NlaIV GGNNCC 6 cut(s) 125, 126, 259, 537, 702, 1275
NmeAIII GCCGAG 1 cut(s) 1240
NmuCI GTSAC 1 cut(s) 1162
NruI TCGCGA 1 cut(s) 252
NspI RCATGY 3 cut(s) 485, 1040, 1943
PagI TCATGA 1 cut(s) 1533
PceI AGGCCT 1 cut(s) 173
PciSI GCTCTTC 3 cut(s) 953, 1971, 2169
PcsI WCGNNNNNNNCGW 1 cut(s) 1968
PctI GAATGC 2 cut(s) 693, 1377
PdmI GAANNNNTTC 2 cut(s) 297, 1079
PfeI GAWTC 5 cut(s) 874, 1014, 1856, 1865, 1931
Pfl23II CGTACG 1 cut(s) 338
PfoI TCCNGGA 1 cut(s) 1287
PinAI ACCGGT 2 cut(s) 866, 1059
PleI GAGTC 6 cut(s) 155, 577, 931, 937, 1195, 1207
PpsI GAGTC 6 cut(s) 155, 577, 931, 937, 1195, 1207
PpuMI RGGWCCY 2 cut(s) 124, 536
PshAI GACNNNNGTC 1 cut(s) 129
PshBI ATTAAT 1 cut(s) 582
PsiI TTATAA 1 cut(s) 1947
Psp1406I AACGTT 3 cut(s) 588, 1665, 1792
Psp5II RGGWCCY 2 cut(s) 124, 536
Psp6I CCWGG 4 cut(s) 723, 1005, 1287, 2073
PspGI CCWGG 4 cut(s) 723, 1005, 1287, 2073
PspLI CGTACG 1 cut(s) 338
PspN4I GGNNCC 6 cut(s) 125, 126, 259, 537, 702, 1275
PspPI GGNCC 5 cut(s) 124, 324, 491, 536, 2071
PspPPI RGGWCCY 2 cut(s) 124, 536
PsrI GAACNNNNNNTAC 2 cut(s) 1743, 1775
PstI CTGCAG 1 cut(s) 1996
PstNI CAGNNNCTG 1 cut(s) 1387
PsuI RGATCY 1 cut(s) 700
PvuII CAGCTG 2 cut(s) 1692, 2102
RruI TCGCGA 1 cut(s) 252
RsaI GTAC 2 cut(s) 340, 2065
RsaNI GTAC 2 cut(s) 339, 2064
RseI CAYNNNNRTG 4 cut(s) 432, 480, 1160, 1382
SapI GCTCTTC 3 cut(s) 953, 1971, 2169
SaqAI TTAA 6 cut(s) 582, 918, 1656, 1787, 2186, 2225
Sau3AI GATC 5 cut(s) 36, 61, 700, 1219, 1598
Sau96I GGNCC 5 cut(s) 124, 324, 491, 536, 2071
SchI GAGTC 6 cut(s) 155, 578, 932, 938, 1196, 1208
ScrFI CCNGG 4 cut(s) 725, 1007, 1289, 2075
SfaNI GCATC 5 cut(s) 757, 1164, 1246, 1376, 1635
SfcI CTRYAG 1 cut(s) 1992
SinI GGWCC 5 cut(s) 124, 324, 491, 536, 2071
SmiMI CAYNNNNRTG 4 cut(s) 432, 480, 1160, 1382
SmlI CTYRAG 2 cut(s) 1092, 1860
SmoI CTYRAG 2 cut(s) 1092, 1860
SseBI AGGCCT 1 cut(s) 173
SsiI CCGC 8 cut(s) 8, 14, 178, 223, 271, 304, 524, 979
SspI AATATT 1 cut(s) 1530
SspMI CTAG 6 cut(s) 90, 348, 540, 975, 1205, 1374
StuI AGGCCT 1 cut(s) 173
StyD4I CCNGG 4 cut(s) 723, 1005, 1287, 2073
StyI CCWWGG 3 cut(s) 89, 1321, 2067
TaaI ACNGT 6 cut(s) 311, 343, 376, 808, 845, 1582
TaiI ACGT 4 cut(s) 591, 1080, 1668, 1795
TauI GCSGC 5 cut(s) 10, 273, 306, 527, 981
TfiI GAWTC 5 cut(s) 874, 1014, 1856, 1865, 1931
Tru1I TTAA 6 cut(s) 582, 918, 1656, 1787, 2186, 2225
Tru9I TTAA 6 cut(s) 582, 918, 1656, 1787, 2186, 2225
TscAI CASTG 3 cut(s) 39, 811, 1876
TseFI GTSAC 1 cut(s) 1162
Tsp45I GTSAC 1 cut(s) 1162
TspDTI ATGAA 6 cut(s) 797, 1416, 1440, 1472, 1522, 1550
TspGWI ACGGA 2 cut(s) 458, 897
TspRI CASTG 3 cut(s) 39, 811, 1876
VpaK11BI GGWCC 5 cut(s) 124, 324, 491, 536, 2071
VspI ATTAAT 1 cut(s) 582
XapI RAATTY 7 cut(s) 155, 772, 1181, 1538, 1625, 2112, 2229
XceI RCATGY 3 cut(s) 485, 1040, 1943
XcmI CCANNNNNNNNNTGG 1 cut(s) 1615
XmaJI CCTAGG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 2 cut(s) 297, 1079
XspI CTAG 6 cut(s) 90, 348, 540, 975, 1205, 1374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.