Rh2DG651100

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000165
Physical Location & Seq
Forward (+)
87703567 .. 87708031
4465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG651100.1

Sequence Viewer

Length: 2298 bp
ATGGAGGAGATTGTTGGAGAAGATGGAGAACTAAAGCCGGGTATGCAAGTATATTCTGATGATGAAGCTTATAATCTATACAATAATTATGCTTTGAGAAAAGGATTTAGTATTCGTAAAGGGCATATAAGAAGAGATGCATCAGGTAATGTTCGATTGAGAGAGTTTATGTGTGCGAAAGAGGGGTTTGCAAGAGACCAAGATACATTTGAACAGAAAAGATATAAGAAGTTAGAGACAAGAACCGGTTGCAAGGCTATGATTGTATTTACTGTCGCAGATGGAATATGGACAATTTCTCATATCAATTCAGAGCATAACCATGACCTTGCTAGGCCTGAAGAAAGACAATTTCTAAAATCAGGCCGAAAAGTATTGGAGGCTCATGGAAATGTCATGCTTTCTATGTTAGGTGCTGGTATACCGCCAACAAAATCATTCTTCTACCTAGCAAATGAAATGGGCGGTCCTGAGAATGTTGGGTTCACTAAAAAAGATGTTCATAATTTTTTACAGAGGAAGAAAAATGAAATGCTTGAAGCAGGGGATGGACAGAGTTTGCTCAATCACTTTAAGCGCAAACAAGGTGAGGATCCTAACTTTTTCTACTCAATGCAATTAGACCAATATAGTCGAATGACAAATTTCTTTTGGAGAGATAATAGATCAAAATTTGATTATGATTGTTTTGGTGATGTTATTTGCTTTGATACCACATTCCGTACAAACAAGTATAATTTGATTTGTGCTCCTATAGTGGGAGTCAATCATCATTGGAGAAATGTGATGTTTGGATGTGCCTTTTTATTGGATGAGACTACCGAGTCATTTGTTTGGTTGTTTGAGTCATTTTTGGAATCGATGGGAAATAAAGCACCAAAAACTATTTTTACAGATGAAGATAAAGCAATGGCAAAAGCAATTGGGCAAGTTTTTCCAGGTACACAGCATCGGTTATGCACTTGGCATATTTCTAAGAATGCTGGAAAGAGAATTGGTAGTTACCTTGCAAATCCTGAGTTCAAGAAACAATTCAACAAGTGTTTGCATGGCTGTAGTACAGAAACTGAATTTCAAGCTTCATGGGATGATATGATCAGTAGATATAATCTTGGTGGTAATACATGGCTTGAGAAGTTGTATTCGCTCCGGGAGAAATGGTGTCCAGTTTTTAGTTTGGACATCTTTTCAGCAAAAATTAGATCAACTCAAAGGAGTGAAAGTACTAACAATGTGTTCCATCAAATCTCTACACACACAATGGAGCTCATCAAATTTGTGCATCACTATGAGAAAAAAATTGAAGAGATGCGTTTGGCGGAGTTGGAAGATGACTACCGATGCAAAAATGGTACACCTCGTCCCCAAGTGTGGAGTAGAATGTTAAGGAGAGCAGCTAAGGTGTATACAATTAAAATGTTTCAGCTATTTGAAACAGAGTTTGTTGGCTGTATGGGAGTTAGACTAAAAGAAGCTTTCAAGAGGGATGAAGTACATTCATATGAAGCAATTGAAGATGGTAAACAAAGTGTACACAAGATTCAGTATAACTCTATATCCTTCGACATTTCTTGTTCTTGCAAGTCTTTTGAATCACTTGGAATCTTGTGTCGTCATGCTTTGAAGGTGTTTGATATCAATAATGTCACTGTTTTACCCACTCAATATATATTGAAGAGGTGGACTAGAGAAGCAAAGAAAGGGATTGTGGTAAGCAATAACATTTCTGGAGGTACAAGTGAGAATATAAAGTCTGCTAGATTGTTGCGCCCTAGTGAGCTAATGCATGAAGGAAATAGTGTTTATGACATAGCTTCATTGAGTTGTTCAGGGACTAAGATTGTGAAGGAGCTGTTAGTAGAGGCAATGAAGCGTCTTGAGAAAGACAAGGAAACTCAGGACATGTTGGAAAATTTGAACAAAGTTGGTAATCAGTCCAATCTTGACATTCCAGTAAACTCAGGTCATGTTTTAGATCCACCATGTGCCAAGACTAAAGGAATGACAAATGAAAGAATCAAAGACATAAGGGAGAAAAAACAACGGAAGAATAAGAAAACAAAAGATGCAAGCCAAGACAATCAAGAAAACGTGATTGATTCTTCTTTTATACCAAGAGCTCCACTTCATGTGCCAGCATTTAATCCTCACTTTGGTGTACCTCACACCCCATTTCATAATCAGGGTAATTTAAGTTGGACTTTTGGGAATCCCAATTTCTGTTTCAATTATGGTGTTATGCCTTCCTCAAATCAGAACTCCTGCAACTCTGCAAGTACTAATAGAAGAGTATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE PEARLI-4 SWIM

Protein Analysis

765

Amino Acids

88.03

Weight (kDa)

8.88

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 26 - 111 2.2e-20 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 198 - 316 3.9e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 233 - 327 1.3e-30 MULE transposase domain
SWIM PF04434 521 - 544 5.3e-07 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
AasI GACNNNNNNGTC 1 cut(s) 823
AccI GTMKAC 2 cut(s) 421, 1406
AciI CCGC 3 cut(s) 425, 465, 1319
AclWI GGATC 3 cut(s) 587, 600, 1970
AcsI RAATTY 5 cut(s) 643, 671, 1070, 1274, 1912
AcuI CTGAAG 1 cut(s) 360
AdeI CACNNNGTG 1 cut(s) 1985
AfiI CCNNNNNNNGG 3 cut(s) 758, 1371, 2153
AflIII ACRYGT 1 cut(s) 1902
AgeI ACCGGT 1 cut(s) 245
AjnI CCWGG 1 cut(s) 937
AjuI GAANNNNNNNTTGG 2 cut(s) 2207, 2239
AleI CACNNNNGTG 1 cut(s) 2154
Alw21I GWGCWC 3 cut(s) 751, 1269, 2122
Alw26I GTCTC 3 cut(s) 189, 230, 809
AlwI GGATC 3 cut(s) 587, 600, 1970
AlwNI CAGNNNCTG 1 cut(s) 1067
AoxI GGCC 2 cut(s) 335, 364
ApeKI GCWGC 1 cut(s) 1394
ApoI RAATTY 5 cut(s) 643, 671, 1070, 1274, 1912
AsiGI ACCGGT 1 cut(s) 245
Asp700I GAANNNNTTC 1 cut(s) 1031
AspLEI GCGC 2 cut(s) 579, 1770
AspS9I GGNCC 1 cut(s) 467
AsuC2I CCSGG 2 cut(s) 39, 1151
AsuHPI GGTGA 2 cut(s) 599, 704
AvaII GGWCC 1 cut(s) 467
BamHI GGATCC 1 cut(s) 592
BanII GRGCYC 2 cut(s) 1269, 2122
Bbv12I GWGCWC 3 cut(s) 751, 1269, 2122
BbvI GCAGC 1 cut(s) 1406
BccI CCATC 6 cut(s) 17, 275, 542, 856, 1248, 1511
BciT130I CCWGG 1 cut(s) 939
BclI TGATCA 1 cut(s) 1095
BcnI CCSGG 2 cut(s) 39, 1151
BcoDI GTCTC 3 cut(s) 189, 230, 809
BfaI CTAG 5 cut(s) 333, 449, 1686, 1758, 1773
BfmI CTRYAG 2 cut(s) 753, 1054
BisI GCNGC 1 cut(s) 1395
BlsI GCNGC 1 cut(s) 1396
BmcAI AGTACT 2 cut(s) 1225, 2278
Bme1390I CCNGG 3 cut(s) 39, 939, 1151
Bme18I GGWCC 1 cut(s) 467
BmgT120I GGNCC 1 cut(s) 467
BmiI GGNNCC 1 cut(s) 594
BmrFI CCNGG 3 cut(s) 39, 939, 1151
BmsI GCATC 7 cut(s) 127, 149, 958, 1291, 1299, 1331, 2056
BpmI CTGGAG 1 cut(s) 1749
Bpu10I CCTNAGC 1 cut(s) 1398
BpuEI CTTGAG 2 cut(s) 1151, 1898
BpuMI CCSGG 2 cut(s) 39, 1151
Bsa29I ATCGAT 1 cut(s) 860
BsaI GGTCTC 1 cut(s) 189
BsaWI WCCGGW 1 cut(s) 245
BsaXI ACNNNNNCTCC 4 cut(s) 1145, 1175, 1207, 1237
Bsc4I CCNNNNNNNGG 3 cut(s) 758, 1371, 2153
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 2 cut(s) 1166, 1952
Bse3DI GCAATG 2 cut(s) 915, 1872
BseBI CCWGG 1 cut(s) 939
BseCI ATCGAT 1 cut(s) 860
BseGI GGATG 5 cut(s) 553, 800, 817, 1093, 1492
BseLI CCNNNNNNNGG 3 cut(s) 758, 1371, 2153
BseMI GCAATG 2 cut(s) 915, 1872
BseMII CTCAG 4 cut(s) 462, 1008, 1910, 1974
BseNI ACTGG 2 cut(s) 1166, 1952
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 1406
BshFI GGCC 2 cut(s) 337, 366
BshTI ACCGGT 1 cut(s) 245
BshVI ATCGAT 1 cut(s) 860
BsiHKAI GWGCWC 3 cut(s) 751, 1269, 2122
BsiSI CCGG 3 cut(s) 38, 246, 1150
BslFI GGGAC 2 cut(s) 1347, 1846
BslI CCNNNNNNNGG 3 cut(s) 758, 1371, 2153
BsmAI GTCTC 3 cut(s) 189, 230, 809
BsmFI GGGAC 2 cut(s) 1347, 1846
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 2 cut(s) 337, 366
Bso31I GGTCTC 1 cut(s) 189
Bsp1286I GDGCHC 3 cut(s) 751, 1269, 2122
Bsp1407I TGTACA 1 cut(s) 1531
Bsp143I GATC 5 cut(s) 592, 665, 1095, 1202, 1975
BspACI CCGC 3 cut(s) 425, 465, 1319
BspANI GGCC 2 cut(s) 337, 366
BspCNI CTCAG 4 cut(s) 463, 1009, 1909, 1973
BspDI ATCGAT 1 cut(s) 860
BspLI GGNNCC 1 cut(s) 594
BspPI GGATC 3 cut(s) 587, 600, 1970
BspTNI GGTCTC 1 cut(s) 189
BsrDI GCAATG 2 cut(s) 915, 1872
BsrFI RCCGGY 1 cut(s) 245
BsrGI TGTACA 1 cut(s) 1531
BsrI ACTGG 2 cut(s) 1166, 1952
BssAI RCCGGY 1 cut(s) 245
BssMI GATC 5 cut(s) 592, 665, 1095, 1202, 1975
BssNAI GTATAC 2 cut(s) 422, 1407
Bst1107I GTATAC 2 cut(s) 422, 1407
Bst2UI CCWGG 1 cut(s) 939
Bst4CI ACNGT 2 cut(s) 274, 1651
Bst6I CTCTTC 4 cut(s) 127, 1299, 1670, 2281
BstAUI TGTACA 1 cut(s) 1531
BstC8I GCNNGC 2 cut(s) 2071, 2136
BstDEI CTNAG 7 cut(s) 471, 975, 1017, 1398, 1836, 1896, 1960
BstF5I GGATG 5 cut(s) 553, 800, 817, 1093, 1492
BstHHI GCGC 2 cut(s) 579, 1770
BstKTI GATC 5 cut(s) 595, 668, 1098, 1205, 1978
BstMAI GTCTC 3 cut(s) 189, 230, 809
BstMBI GATC 5 cut(s) 592, 665, 1095, 1202, 1975
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 939
BstNSI RCATGY 1 cut(s) 1906
BstSCI CCNGG 3 cut(s) 37, 937, 1149
BstSFI CTRYAG 2 cut(s) 753, 1054
BstV1I GCAGC 1 cut(s) 1406
BstX2I RGATCY 2 cut(s) 592, 1975
BstYI RGATCY 2 cut(s) 592, 1975
BstZ17I GTATAC 2 cut(s) 422, 1407
Bsu15I ATCGAT 1 cut(s) 860
BsuRI GGCC 2 cut(s) 337, 366
BsuTUI ATCGAT 1 cut(s) 860
BtsCI GGATG 5 cut(s) 553, 800, 817, 1093, 1492
BtsIMutI CAGTG 1 cut(s) 1647
Cac8I GCNNGC 2 cut(s) 2071, 2136
CaiI CAGNNNCTG 1 cut(s) 1067
CfoI GCGC 2 cut(s) 579, 1770
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 1 cut(s) 467
ClaI ATCGAT 1 cut(s) 860
CseI GACGC 1 cut(s) 1862
CspAI ACCGGT 1 cut(s) 245
DdeI CTNAG 7 cut(s) 471, 975, 1017, 1398, 1836, 1896, 1960
DpnI GATC 5 cut(s) 594, 667, 1097, 1204, 1977
DpnII GATC 5 cut(s) 592, 665, 1095, 1202, 1975
DraIII CACNNNGTG 1 cut(s) 1985
DrdI GACNNNNNNGTC 1 cut(s) 823
DseDI GACNNNNNNGTC 1 cut(s) 823
Eam1104I CTCTTC 4 cut(s) 127, 1299, 1670, 2281
EarI CTCTTC 4 cut(s) 127, 1299, 1670, 2281
EciI GGCGGA 1 cut(s) 1334
Ecl136II GAGCTC 2 cut(s) 1267, 2120
Eco147I AGGCCT 1 cut(s) 337
Eco24I GRGCYC 2 cut(s) 1269, 2122
Eco31I GGTCTC 1 cut(s) 189
Eco32I GATATC 1 cut(s) 1636
Eco47I GGWCC 1 cut(s) 467
Eco53kI GAGCTC 2 cut(s) 1267, 2120
Eco57I CTGAAG 1 cut(s) 360
EcoICRI GAGCTC 2 cut(s) 1267, 2120
EcoRII CCWGG 1 cut(s) 937
EcoRV GATATC 1 cut(s) 1636
EcoT22I ATGCAT 2 cut(s) 142, 1788
EcoT38I GRGCYC 2 cut(s) 1269, 2122
FalI AAGNNNNNCTT 2 cut(s) 2185, 2217
FaqI GGGAC 2 cut(s) 1347, 1846
FauNDI CATATG 1 cut(s) 1501
FbaI TGATCA 1 cut(s) 1095
FblI GTMKAC 2 cut(s) 421, 1406
Fnu4HI GCNGC 1 cut(s) 1395
FokI GGATG 5 cut(s) 560, 807, 824, 1100, 1499
FriOI GRGCYC 2 cut(s) 1269, 2122
Fsp4HI GCNGC 1 cut(s) 1395
FspBI CTAG 5 cut(s) 333, 449, 1686, 1758, 1773
GlaI GCGC 2 cut(s) 578, 1769
GluI GCNGC 1 cut(s) 1395
GsuI CTGGAG 1 cut(s) 1749
HaeIII GGCC 2 cut(s) 337, 366
HapII CCGG 3 cut(s) 38, 246, 1150
HgaI GACGC 1 cut(s) 1862
HhaI GCGC 2 cut(s) 579, 1770
Hin6I GCGC 2 cut(s) 577, 1768
HinP1I GCGC 2 cut(s) 577, 1768
HindIII AAGCTT 3 cut(s) 66, 1077, 1473
HpaII CCGG 3 cut(s) 38, 246, 1150
HphI GGTGA 2 cut(s) 599, 704
Hpy188I TCNGA 3 cut(s) 58, 313, 2256
Hpy188III TCNNGA 9 cut(s) 470, 1016, 1024, 1480, 1728, 1877, 1898, 1943, 2084
HpyAV CCTTC 5 cut(s) 1570, 1618, 1784, 1840, 2253
HpyCH4III ACNGT 2 cut(s) 274, 1651
HpyCH4IV ACGT 1 cut(s) 2091
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 7 cut(s) 471, 975, 1017, 1398, 1836, 1896, 1960
HpySE526I ACGT 1 cut(s) 2091
HspAI GCGC 2 cut(s) 577, 1768
Ksp22I TGATCA 1 cut(s) 1095
Kzo9I GATC 5 cut(s) 592, 665, 1095, 1202, 1975
LmnI GCTCC 5 cut(s) 754, 1152, 1264, 1849, 2125
Lsp1109I GCAGC 1 cut(s) 1406
LweI GCATC 7 cut(s) 127, 149, 958, 1291, 1299, 1331, 2056
MaeI CTAG 5 cut(s) 333, 449, 1686, 1758, 1773
MaeII ACGT 1 cut(s) 2091
MaeIII GTNAC 2 cut(s) 1001, 1645
MalI GATC 5 cut(s) 594, 667, 1097, 1204, 1977
MboI GATC 5 cut(s) 592, 665, 1095, 1202, 1975
MfeI CAATTG 2 cut(s) 921, 1509
MflI RGATCY 2 cut(s) 592, 1975
MhlI GDGCHC 3 cut(s) 751, 1269, 2122
MlyI GAGTC 3 cut(s) 771, 833, 854
MmeI TCCRAC 3 cut(s) 1305, 1887, 2177
Mph1103I ATGCAT 2 cut(s) 142, 1788
MroXI GAANNNNTTC 1 cut(s) 1031
MseI TTAA 5 cut(s) 573, 1385, 1413, 2142, 2192
MslI CAYNNNNRTG 5 cut(s) 321, 390, 1287, 1500, 2154
MspI CCGG 3 cut(s) 38, 246, 1150
MspR9I CCNGG 3 cut(s) 39, 939, 1151
MunI CAATTG 2 cut(s) 921, 1509
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 1 cut(s) 939
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 39, 1151
NdeI CATATG 1 cut(s) 1501
NdeII GATC 5 cut(s) 592, 665, 1095, 1202, 1975
NlaIV GGNNCC 1 cut(s) 594
NmuCI GTSAC 1 cut(s) 1645
NsiI ATGCAT 2 cut(s) 142, 1788
NspI RCATGY 1 cut(s) 1906
OliI CACNNNNGTG 1 cut(s) 2154
PceI AGGCCT 1 cut(s) 337
PciI ACATGT 1 cut(s) 1902
PctI GAATGC 1 cut(s) 985
PdmI GAANNNNTTC 1 cut(s) 1031
PfeI GAWTC 7 cut(s) 857, 1540, 1592, 1602, 2016, 2099, 2209
PfoI TCCNGGA 1 cut(s) 1149
PinAI ACCGGT 1 cut(s) 245
PkrI GCNGC 1 cut(s) 1396
PleI GAGTC 3 cut(s) 770, 832, 853
PpsI GAGTC 3 cut(s) 770, 832, 853
PscI ACATGT 1 cut(s) 1902
PsiI TTATAA 1 cut(s) 72
Psp124BI GAGCTC 2 cut(s) 1269, 2122
Psp6I CCWGG 1 cut(s) 937
PspGI CCWGG 1 cut(s) 937
PspN4I GGNNCC 1 cut(s) 594
PspPI GGNCC 1 cut(s) 467
PstNI CAGNNNCTG 1 cut(s) 1067
PsuI RGATCY 2 cut(s) 592, 1975
RseI CAYNNNNRTG 5 cut(s) 321, 390, 1287, 1500, 2154
SacI GAGCTC 2 cut(s) 1269, 2122
SaqAI TTAA 5 cut(s) 573, 1385, 1413, 2142, 2192
SatI GCNGC 1 cut(s) 1395
Sau3AI GATC 5 cut(s) 592, 665, 1095, 1202, 1975
Sau96I GGNCC 1 cut(s) 467
ScaI AGTACT 2 cut(s) 1225, 2278
SchI GAGTC 3 cut(s) 771, 833, 854
ScrFI CCNGG 3 cut(s) 39, 939, 1151
SduI GDGCHC 3 cut(s) 751, 1269, 2122
SfaNI GCATC 7 cut(s) 127, 149, 958, 1291, 1299, 1331, 2056
SfcI CTRYAG 2 cut(s) 753, 1054
SinI GGWCC 1 cut(s) 467
SmiMI CAYNNNNRTG 5 cut(s) 321, 390, 1287, 1500, 2154
SmlI CTYRAG 2 cut(s) 1130, 1877
SmoI CTYRAG 2 cut(s) 1130, 1877
SseBI AGGCCT 1 cut(s) 337
SsiI CCGC 3 cut(s) 425, 465, 1319
SspMI CTAG 5 cut(s) 333, 449, 1686, 1758, 1773
SstI GAGCTC 2 cut(s) 1269, 2122
StuI AGGCCT 1 cut(s) 337
StyD4I CCNGG 3 cut(s) 37, 937, 1149
TaaI ACNGT 2 cut(s) 274, 1651
TaiI ACGT 1 cut(s) 2094
TaqI TCGA 4 cut(s) 154, 634, 860, 1563
TatI WGTACW 5 cut(s) 1058, 1223, 1492, 1531, 2276
TfiI GAWTC 7 cut(s) 857, 1540, 1592, 1602, 2016, 2099, 2209
Tru1I TTAA 5 cut(s) 573, 1385, 1413, 2142, 2192
Tru9I TTAA 5 cut(s) 573, 1385, 1413, 2142, 2192
TscAI CASTG 1 cut(s) 1654
TseFI GTSAC 1 cut(s) 1645
TseI GCWGC 1 cut(s) 1394
Tsp45I GTSAC 1 cut(s) 1645
TspGWI ACGGA 2 cut(s) 710, 2059
TspRI CASTG 1 cut(s) 1654
VpaK11BI GGWCC 1 cut(s) 467
XapI RAATTY 5 cut(s) 643, 671, 1070, 1274, 1912
XceI RCATGY 1 cut(s) 1906
XmiI GTMKAC 2 cut(s) 421, 1406
XmnI GAANNNNTTC 1 cut(s) 1031
XspI CTAG 5 cut(s) 333, 449, 1686, 1758, 1773
ZrmI AGTACT 2 cut(s) 1225, 2278
Zsp2I ATGCAT 2 cut(s) 142, 1788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.