Rroxscaffold_2G00145400

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
83362915 .. 83366307
3393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00145400.1

Sequence Viewer

Length: 2406 bp
ATGTATACATGTAATTTTTGGATCAAAAGGATGAGTAAACTATGCCCATTTGGTAAAATGGAGTTTGAGCCATTGAGCTTGGGGAATGAGGTTGTTGAATTTGACCTGATGGGTCTTGGTGACATTGACCGCCCTGTTGTGGACATTGACATTTTTGACGATTCTCTTGCTGTTGTTGGTTCCAATCCCATTGCCCTACCTTACATTATCGAAGGAGAGACTAATCTCGAGCCGTATGAGGGGATGGAGTTTGAGTCAGAAGAGGCTGCCAAGGCCTTTTACAACTCCTATGCTCGCCGCACTGGCTTCAGCACTCGGGTCAGCATGTCTCGCCGCTCCAGGCGGGATGGTGCCATCATCCAGAGGTCTTTTGTTTGTGCCAAGGAGGGTTTTCGTATGGATAAGCATGAAAAGCGTGGTCCTGAGTGTGATGGCAGGGTGAAGCGCCCTCGTGCTGAGACTAGAGTTGGTTGTAAGGCAATGTTGGTGGTCAAGATTCAAGACTCTGGGGGATGGGTTGTGTCATGTTTTGTTAAGGAGCATAACCATGAGCTGGTTCCCCCGGATAAGGTGCATTGCCTCCGCTCTCATCGTCACGTCTCTGGTTCTGCAAAGTCTTTGATTGATACCTTGCAGGGTGCTGGGATTGGCCCTAGTGGAATTATGTCCGCCCTCATCAAAGAATATGGTGATATTAGCAAAGTTGGCTTCACAGAGCGTGACTGCAGGAATTACATGAGGAGTAGTCGGCAAAGGACCCTAGGAGGTGACACTCGGGTGCTCTTGGATTACTTGAAGAACAGGCAAGCCAACGACCCAGCATTTTTCTATTCTGTGCAGGGTGATCAAGACCAGTGCATGAGCAATATCTTCTGGGCTGATCCTAAGGCAAGGAGTGATTACACTTACTTTGGTGATACTGTTACCTTTGACACAACTTACAGGTCAAACCGGTATAGATTACCTTTTGCACCTTTCACCGGGGTTAACCATCATGGACAGCCTGTGTTGTTTGGGTGTGCCCTCTTGGTAAATGAATCTGAGGCATCGTTTCTATGGCTTTTTAAAACATGGCTTATGGCAATGTCTGGCCGACCTCCAGTCTCAATCACTACTGATCATGATAGGGTGATCTGCATGGCTATCACCCAGGTTTTTCCTGAGGCTCGACACCGCTTCTGCAAGTGGCATATTTTTAAAGAGTGCCAAGAGAAACTGTCCCATGTACTTTCTGAGCATTCCAACTTTGAAGCAGAGCTTCACAAATGTGTCAACCTGACTGAATCTATTGCAGAGTTTGAGTCTAGTTGGTTGTCTCTAATTGAAAAATATGATCTCAGAGATCATGAATGGCTTCAAGGGATATATGCTGATCGAAGGCAGTGGGTACCTATATACTTGAGGGACACCTTCTTTGCAGAAATGTCTATAACACAACGTAGCAATACCATGAACTCATATTTTGATGGATATGTCAATGCATCAACATCTCTACAGCTGTTTGTTAAGCAGTATGAGAAAGCTCTTGAAAGTCGTTATGAGAAAGAAGTGAAGGCAGATTATGATACTATAAACACTGCCCCGCTTCTCAAGACCCCTTCACCGATGGAGAAACAGGCTGGTGAGCTTTACACGAGGAAATTGTTTATGAAATTCCAAGAGGAGCTGGTTGAGACTTTAACTTTCTTGGCAACCAAAGTTGAGGATGAGGAGGCAGGATCCATATATCAAGTTGCCAAATTTGGAGAAAGTCACAGAGCTTATTTTGTCAGATACGATGTTCATGCGATGAAAGCATTTTGTAGTTGCCAGATGTTTGAGTTCTCTGGCCTTCTTTGTGGACACATCTTGACAGTTTTTCGGGTGACAAATGTTCTTACTCTGCCATCTCATTATATTTTGAAGCGGTGGACGAGGAATGCCAAGAGTGATGTCATATTGGAGGAACGTGCCAGCAATTTGTTGAATAGGTCGCAAGAATCTCTCACAGCACGATACAATAATCTAAGGCATGAGGCACTCAAGTTTGTTGATGAAGGTGTTGGAACTGTTGAAATTTATAATGTGGCTATTGCTGCCCTTCAAGAAGCTGCAAAAAAAGTTGCTCTAGAAAACAAGAGTAGCGGGAGGTTGGTCAGTGTTAAAAAAACTGGCAGAGATGACGATTTGCACTGGGGATGTCAAGCAAATACATTTGGTGATCATAAATGGGGCTTGGAAACTCTGTCTCCGGATGACCAGGACAAGAAAATCCAGAAACTATCGCGTCAACTTGAGCGTGCACGACGGAAATGTGAAGTGTATCGAACGCATTTGTTTTCGGTTTTGAAAGACATTGAGGAGCAAAAATTACAACTCTCCGTGAAAGTTCAAAACATTAGAATAGAAATGGAAGAGTGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

801

Amino Acids

92.16

Weight (kDa)

6.91

Isoelectric Point (pI)

51.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 93 - 187 2.4e-31 FAR1 DNA-binding domain
MULE PF10551 308 - 400 1.2e-30 MULE transposase domain
SWIM PF04434 593 - 621 6.8e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2061
Acc65I GGTACC 1 cut(s) 1387
AccB1I GGYRCC 2 cut(s) 350, 1387
AccB7I CCANNNNNTGG 1 cut(s) 553
AccBSI CCGCTC 2 cut(s) 336, 585
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 2266
AccIII TCCGGA 1 cut(s) 2230
AclWI GGATC 4 cut(s) 29, 875, 1713, 1726
AcoI YGGCCR 1 cut(s) 1090
AcsI RAATTY 4 cut(s) 98, 1652, 1739, 2055
AcuI CTGAAG 1 cut(s) 292
AfaI GTAC 2 cut(s) 1227, 1389
AfiI CCNNNNNNNGG 5 cut(s) 139, 239, 553, 568, 980
AflIII ACRYGT 1 cut(s) 8
AgeI ACCGGT 1 cut(s) 951
AhdI GACNNNNNGTC 1 cut(s) 1100
AjiI CACGTC 1 cut(s) 598
AjnI CCWGG 3 cut(s) 338, 1149, 2238
AleI CACNNNNGTG 2 cut(s) 776, 1266
AluBI AGCT 9 cut(s) 78, 553, 1258, 1498, 1523, 1627, 1666, 1760, 2090
AluI AGCT 9 cut(s) 78, 553, 1258, 1498, 1523, 1627, 1666, 1760, 2090
Alw21I GWGCWC 2 cut(s) 783, 2284
Alw26I GTCTC 8 cut(s) 212, 333, 452, 604, 1108, 1320, 1667, 2232
Alw44I GTGCAC 1 cut(s) 2280
AlwI GGATC 4 cut(s) 29, 875, 1713, 1726
Ama87I CYCGRG 3 cut(s) 227, 315, 774
Aor13HI TCCGGA 1 cut(s) 2230
AoxI GGCC 4 cut(s) 273, 649, 1090, 1828
ApaLI GTGCAC 1 cut(s) 2280
ApeKI GCWGC 3 cut(s) 266, 2075, 2090
ApoI RAATTY 4 cut(s) 98, 1652, 1739, 2055
ArsI GACNNNNNNTTYG 2 cut(s) 1397, 1429
AsiGI ACCGGT 1 cut(s) 951
Asp700I GAANNNNTTC 1 cut(s) 1353
Asp718I GGTACC 1 cut(s) 1387
AspA2I CCTAGG 1 cut(s) 760
AspLEI GCGC 1 cut(s) 447
AspS9I GGNCC 3 cut(s) 419, 650, 756
AsuC2I CCSGG 2 cut(s) 563, 982
AvaI CYCGRG 3 cut(s) 227, 315, 774
AvaII GGWCC 2 cut(s) 419, 756
AvrII CCTAGG 1 cut(s) 760
AxyI CCTNAGG 2 cut(s) 885, 1161
BaeGI GKGCMC 2 cut(s) 1024, 2284
BamHI GGATCC 1 cut(s) 1718
BanI GGYRCC 2 cut(s) 350, 1387
BauI CACGAG 2 cut(s) 450, 1633
Bbv12I GWGCWC 2 cut(s) 783, 2284
BbvI GCAGC 3 cut(s) 253, 2062, 2077
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 4 cut(s) 149, 183, 1766, 1800
BciT130I CCWGG 3 cut(s) 340, 1151, 2240
BclI TGATCA 3 cut(s) 844, 1117, 2200
BcnI CCSGG 2 cut(s) 563, 982
BcoDI GTCTC 8 cut(s) 212, 333, 452, 604, 1108, 1320, 1667, 2232
BfaI CTAG 5 cut(s) 462, 654, 761, 1305, 2108
BfmI CTRYAG 2 cut(s) 724, 1493
BfoI RGCGCY 1 cut(s) 448
BglI GCCNNNNNGGC 1 cut(s) 303
BisI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
BlnI CCTAGG 1 cut(s) 760
BlsI GCNGC 5 cut(s) 268, 299, 335, 2077, 2092
Bme1390I CCNGG 5 cut(s) 340, 563, 982, 1151, 2240
Bme18I GGWCC 2 cut(s) 419, 756
BmeRI GACNNNNNGTC 1 cut(s) 1100
BmeT110I CYCGRG 3 cut(s) 227, 315, 774
BmgBI CACGTC 1 cut(s) 598
BmgT120I GGNCC 3 cut(s) 419, 650, 756
BmiI GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
BmrFI CCNGG 5 cut(s) 340, 563, 982, 1151, 2240
BmrI ACTGGG 1 cut(s) 2182
BmsI GCATC 2 cut(s) 1055, 1490
BmuI ACTGGG 1 cut(s) 2182
BpmI CTGGAG 2 cut(s) 322, 1083
BpuEI CTTGAG 4 cut(s) 1420, 1574, 2006, 2294
BpuMI CCSGG 2 cut(s) 563, 982
BsaJI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BsaWI WCCGGW 2 cut(s) 951, 2230
BsaXI ACNNNNNCTCC 4 cut(s) 239, 269, 2212, 2242
Bsc4I CCNNNNNNNGG 5 cut(s) 139, 239, 553, 568, 980
Bse118I RCCGGY 1 cut(s) 951
Bse1I ACTGG 5 cut(s) 307, 853, 1100, 2155, 2177
Bse21I CCTNAGG 2 cut(s) 885, 1161
Bse3DI GCAATG 4 cut(s) 189, 486, 574, 1089
BseAI TCCGGA 1 cut(s) 2230
BseBI CCWGG 3 cut(s) 340, 1151, 2240
BseDI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BseGI GGATG 8 cut(s) 36, 249, 352, 357, 518, 1711, 2183, 2239
BseLI CCNNNNNNNGG 5 cut(s) 139, 239, 553, 568, 980
BseMI GCAATG 4 cut(s) 189, 486, 574, 1089
BseMII CTCAG 6 cut(s) 414, 447, 1032, 1152, 1224, 1351
BseNI ACTGG 5 cut(s) 307, 853, 1100, 2155, 2177
BseRI GAGGAG 4 cut(s) 754, 1676, 1724, 2354
BseSI GKGCMC 2 cut(s) 1024, 2284
BseXI GCAGC 3 cut(s) 253, 2062, 2077
BseYI CCCAGC 2 cut(s) 641, 817
BsgI GTGCAG 1 cut(s) 857
Bsh1236I CGCG 1 cut(s) 2266
BshFI GGCC 4 cut(s) 275, 651, 1092, 1830
BshNI GGYRCC 2 cut(s) 350, 1387
BshTI ACCGGT 1 cut(s) 951
BsiHKAI GWGCWC 2 cut(s) 783, 2284
BsiHKCI CYCGRG 3 cut(s) 227, 315, 774
BsiSI CCGG 4 cut(s) 563, 952, 981, 2231
BslFI GGGAC 2 cut(s) 1204, 1418
BslI CCNNNNNNNGG 5 cut(s) 139, 239, 553, 568, 980
BsmAI GTCTC 8 cut(s) 212, 333, 452, 604, 1108, 1320, 1667, 2232
BsmBI CGTCTC 1 cut(s) 604
BsmFI GGGAC 2 cut(s) 1204, 1418
BsmI GAATGC 2 cut(s) 1237, 1924
BsnI GGCC 4 cut(s) 275, 651, 1092, 1830
BsoBI CYCGRG 3 cut(s) 227, 315, 774
Bsp1286I GDGCHC 3 cut(s) 783, 1024, 2284
Bsp13I TCCGGA 1 cut(s) 2230
BspANI GGCC 4 cut(s) 275, 651, 1092, 1830
BspCNI CTCAG 6 cut(s) 415, 448, 1033, 1153, 1225, 1350
BspEI TCCGGA 1 cut(s) 2230
BspFNI CGCG 1 cut(s) 2266
BspHI TCATGA 2 cut(s) 1120, 1345
BspLI GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
BspMAI CTGCAG 1 cut(s) 728
BspPI GGATC 4 cut(s) 29, 875, 1713, 1726
BspT107I GGYRCC 2 cut(s) 350, 1387
BsrBI CCGCTC 2 cut(s) 336, 585
BsrDI GCAATG 4 cut(s) 189, 486, 574, 1089
BsrFI RCCGGY 1 cut(s) 951
BsrI ACTGG 5 cut(s) 307, 853, 1100, 2155, 2177
BssAI RCCGGY 1 cut(s) 951
BssECI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BssNAI GTATAC 1 cut(s) 6
BssSI CACGAG 2 cut(s) 450, 1633
BssT1I CCWWGG 3 cut(s) 270, 381, 760
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 2 cut(s) 450, 1633
Bst2UI CCWGG 3 cut(s) 340, 1151, 2240
Bst4CI ACNGT 4 cut(s) 922, 1218, 1855, 2050
Bst6I CTCTTC 2 cut(s) 255, 2388
BstC8I GCNNGC 4 cut(s) 295, 807, 1954, 2280
BstDEI CTNAG 8 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337, 2006
BstF5I GGATG 8 cut(s) 36, 249, 352, 357, 518, 1711, 2183, 2239
BstFNI CGCG 1 cut(s) 2266
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 1 cut(s) 447
BstMAI GTCTC 8 cut(s) 212, 333, 452, 604, 1108, 1320, 1667, 2232
BstMWI GCNNNNNNNGC 7 cut(s) 272, 303, 330, 412, 705, 1793, 2075
BstNI CCWGG 3 cut(s) 340, 1151, 2240
BstNSI RCATGY 2 cut(s) 12, 328
BstSCI CCNGG 5 cut(s) 338, 561, 980, 1149, 2238
BstSFI CTRYAG 2 cut(s) 724, 1493
BstSLI GKGCMC 2 cut(s) 1024, 2284
BstUI CGCG 1 cut(s) 2266
BstV1I GCAGC 3 cut(s) 253, 2062, 2077
BstX2I RGATCY 1 cut(s) 1718
BstYI RGATCY 1 cut(s) 1718
BstZ17I GTATAC 1 cut(s) 6
Bsu36I CCTNAGG 2 cut(s) 885, 1161
BsuRI GGCC 4 cut(s) 275, 651, 1092, 1830
BtgZI GCGATG 1 cut(s) 1802
BtrI CACGTC 1 cut(s) 598
BtsCI GGATG 8 cut(s) 36, 249, 352, 357, 518, 1711, 2183, 2239
BtsI GCAGTG 2 cut(s) 1388, 1575
BtsIMutI CAGTG 6 cut(s) 300, 860, 1388, 1575, 2143, 2170
Cac8I GCNNGC 4 cut(s) 295, 807, 1954, 2280
CciI TCATGA 2 cut(s) 1120, 1345
CfoI GCGC 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 951
Cfr13I GGNCC 3 cut(s) 419, 650, 756
CseI GACGC 1 cut(s) 2255
Csp6I GTAC 2 cut(s) 1226, 1388
CspAI ACCGGT 1 cut(s) 951
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviQI GTAC 2 cut(s) 1226, 1388
DdeI CTNAG 8 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337, 2006
DraI TTTAAA 2 cut(s) 1066, 1198
DriI GACNNNNNGTC 1 cut(s) 1100
EaeI YGGCCR 1 cut(s) 1090
Eam1104I CTCTTC 2 cut(s) 255, 2388
Eam1105I GACNNNNNGTC 1 cut(s) 1100
EarI CTCTTC 2 cut(s) 255, 2388
EciI GGCGGA 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 270, 381, 760
Eco147I AGGCCT 1 cut(s) 275
Eco47I GGWCC 2 cut(s) 419, 756
Eco57I CTGAAG 1 cut(s) 292
Eco81I CCTNAGG 2 cut(s) 885, 1161
Eco88I CYCGRG 3 cut(s) 227, 315, 774
EcoO109I RGGNCCY 1 cut(s) 756
EcoRII CCWGG 3 cut(s) 338, 1149, 2238
EcoT14I CCWWGG 3 cut(s) 270, 381, 760
EcoT22I ATGCAT 1 cut(s) 1483
ErhI CCWWGG 3 cut(s) 270, 381, 760
Esp3I CGTCTC 1 cut(s) 604
FalI AAGNNNNNCTT 2 cut(s) 1242, 1274
FaqI GGGAC 2 cut(s) 1204, 1418
FauI CCCGC 3 cut(s) 336, 1590, 2117
FbaI TGATCA 3 cut(s) 844, 1117, 2200
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
FokI GGATG 8 cut(s) 43, 256, 344, 359, 525, 1718, 2190, 2246
Fsp4HI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
FspBI CTAG 5 cut(s) 462, 654, 761, 1305, 2108
GlaI GCGC 1 cut(s) 446
GluI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
GsaI CCCAGC 2 cut(s) 645, 821
GsuI CTGGAG 2 cut(s) 322, 1083
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 4 cut(s) 275, 651, 1092, 1830
HapII CCGG 4 cut(s) 563, 952, 981, 2231
HgaI GACGC 1 cut(s) 2255
HhaI GCGC 1 cut(s) 447
Hin6I GCGC 1 cut(s) 445
HinP1I GCGC 1 cut(s) 445
HincII GTYRAC 3 cut(s) 988, 1273, 2270
HindII GTYRAC 3 cut(s) 988, 1273, 2270
HinfI GANTC 8 cut(s) 161, 254, 496, 503, 1037, 1283, 1301, 1979
HpaI GTTAAC 1 cut(s) 988
HpaII CCGG 4 cut(s) 563, 952, 981, 2231
Hpy166II GTNNAC 9 cut(s) 6, 38, 142, 988, 1273, 1841, 1911, 2270, 2282
Hpy188I TCNGA 5 cut(s) 259, 1042, 1234, 1340, 1772
Hpy8I GTNNAC 9 cut(s) 6, 38, 142, 988, 1273, 1841, 1911, 2270, 2282
Hpy99I CGWCG 1 cut(s) 2289
HpyAV CCTTC 8 cut(s) 206, 1371, 1420, 1546, 1608, 1841, 2030, 2090
HpyCH4III ACNGT 4 cut(s) 922, 1218, 1855, 2050
HpyCH4IV ACGT 3 cut(s) 597, 1438, 1948
HpyF10VI GCNNNNNNNGC 7 cut(s) 272, 303, 330, 412, 705, 1793, 2075
HpyF3I CTNAG 8 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337, 2006
HpySE526I ACGT 3 cut(s) 597, 1438, 1948
HspAI GCGC 1 cut(s) 445
Kpn2I TCCGGA 1 cut(s) 2230
KpnI GGTACC 1 cut(s) 1391
Ksp22I TGATCA 3 cut(s) 844, 1117, 2200
KspAI GTTAAC 1 cut(s) 988
LmnI GCTCC 4 cut(s) 341, 538, 1663, 2341
Lsp1109I GCAGC 3 cut(s) 253, 2062, 2077
LweI GCATC 2 cut(s) 1055, 1490
MaeI CTAG 5 cut(s) 462, 654, 761, 1305, 2108
MaeII ACGT 3 cut(s) 597, 1438, 1948
MaeIII GTNAC 7 cut(s) 119, 593, 719, 767, 922, 1751, 1864
MbiI CCGCTC 2 cut(s) 336, 585
MboII GAAGA 4 cut(s) 272, 808, 862, 2405
MflI RGATCY 1 cut(s) 1718
MhlI GDGCHC 3 cut(s) 783, 1024, 2284
MlyI GAGTC 3 cut(s) 263, 497, 1310
MmeI TCCRAC 2 cut(s) 1266, 2023
Mph1103I ATGCAT 1 cut(s) 1483
MroI TCCGGA 1 cut(s) 2230
MroXI GAANNNNTTC 1 cut(s) 1353
MseI TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
MslI CAYNNNNRTG 3 cut(s) 546, 776, 1266
MspA1I CMGCKG 1 cut(s) 1498
MspI CCGG 4 cut(s) 563, 952, 981, 2231
MspR9I CCNGG 5 cut(s) 340, 563, 982, 1151, 2240
Mva1269I GAATGC 2 cut(s) 1237, 1924
MvaI CCWGG 3 cut(s) 340, 1151, 2240
MvnI CGCG 1 cut(s) 2266
MwoI GCNNNNNNNGC 7 cut(s) 272, 303, 330, 412, 705, 1793, 2075
NciI CCSGG 2 cut(s) 563, 982
NlaIV GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
NmuCI GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
NsiI ATGCAT 1 cut(s) 1483
NspI RCATGY 2 cut(s) 12, 328
OliI CACNNNNGTG 2 cut(s) 776, 1266
PaeR7I CTCGAG 1 cut(s) 227
PagI TCATGA 2 cut(s) 1120, 1345
PceI AGGCCT 1 cut(s) 275
PciI ACATGT 1 cut(s) 8
PctI GAATGC 2 cut(s) 1237, 1924
PdmI GAANNNNTTC 1 cut(s) 1353
PfeI GAWTC 5 cut(s) 161, 496, 1037, 1283, 1979
PflMI CCANNNNNTGG 1 cut(s) 553
PinAI ACCGGT 1 cut(s) 951
PkrI GCNGC 5 cut(s) 268, 299, 335, 2077, 2092
PleI GAGTC 3 cut(s) 262, 497, 1309
PpsI GAGTC 3 cut(s) 262, 497, 1309
PpuMI RGGWCCY 1 cut(s) 756
PscI ACATGT 1 cut(s) 8
PsiI TTATAA 1 cut(s) 2061
Psp5II RGGWCCY 1 cut(s) 756
Psp6I CCWGG 3 cut(s) 338, 1149, 2238
PspFI CCCAGC 2 cut(s) 641, 817
PspGI CCWGG 3 cut(s) 338, 1149, 2238
PspN4I GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
PspPI GGNCC 3 cut(s) 419, 650, 756
PspPPI RGGWCCY 1 cut(s) 756
PstI CTGCAG 1 cut(s) 728
PsuI RGATCY 1 cut(s) 1718
PvuII CAGCTG 1 cut(s) 1498
RsaI GTAC 2 cut(s) 1227, 1389
RsaNI GTAC 2 cut(s) 1226, 1388
RseI CAYNNNNRTG 3 cut(s) 546, 776, 1266
SaqAI TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
SatI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
Sau96I GGNCC 3 cut(s) 419, 650, 756
SchI GAGTC 3 cut(s) 263, 497, 1310
ScrFI CCNGG 5 cut(s) 340, 563, 982, 1151, 2240
SduI GDGCHC 3 cut(s) 783, 1024, 2284
SfaNI GCATC 2 cut(s) 1055, 1490
SfcI CTRYAG 2 cut(s) 724, 1493
Sfr274I CTCGAG 1 cut(s) 227
SinI GGWCC 2 cut(s) 419, 756
SlaI CTCGAG 1 cut(s) 227
SmiMI CAYNNNNRTG 3 cut(s) 546, 776, 1266
SmlI CTYRAG 5 cut(s) 227, 1399, 1589, 2021, 2273
SmoI CTYRAG 5 cut(s) 227, 1399, 1589, 2021, 2273
SseBI AGGCCT 1 cut(s) 275
SspMI CTAG 5 cut(s) 462, 654, 761, 1305, 2108
StuI AGGCCT 1 cut(s) 275
StyD4I CCNGG 5 cut(s) 338, 561, 980, 1149, 2238
StyI CCWWGG 3 cut(s) 270, 381, 760
TaaI ACNGT 4 cut(s) 922, 1218, 1855, 2050
TaiI ACGT 3 cut(s) 600, 1441, 1951
TaqI TCGA 5 cut(s) 210, 228, 1168, 1375, 2305
TatI WGTACW 1 cut(s) 1225
TauI GCSGC 2 cut(s) 300, 336
TfiI GAWTC 5 cut(s) 161, 496, 1037, 1283, 1979
Tru1I TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
Tru9I TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
TscAI CASTG 6 cut(s) 307, 860, 1388, 1582, 2143, 2177
TseFI GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
TseI GCWGC 3 cut(s) 266, 2075, 2090
Tsp45I GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
TspDTI ATGAA 8 cut(s) 423, 1050, 1362, 1466, 1664, 1772, 1805, 2049
TspGWI ACGGA 2 cut(s) 2302, 2350
TspRI CASTG 6 cut(s) 307, 860, 1388, 1582, 2143, 2177
Van91I CCANNNNNTGG 1 cut(s) 553
VneI GTGCAC 1 cut(s) 2280
VpaK11BI GGWCC 2 cut(s) 419, 756
XapI RAATTY 4 cut(s) 98, 1652, 1739, 2055
XbaI TCTAGA 1 cut(s) 2107
XceI RCATGY 2 cut(s) 12, 328
XhoI CTCGAG 1 cut(s) 227
XmaJI CCTAGG 1 cut(s) 760
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 1353
XspI CTAG 5 cut(s) 462, 654, 761, 1305, 2108
Zsp2I ATGCAT 1 cut(s) 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.