Rorug02G0059800

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
4604549 .. 4608116
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0059800.1

Sequence Viewer

Length: 2517 bp
ATGGCGCTAAATTTGCCGACTTCGTGCCCCATTTTCGCGCCACCGGTGAACCCCAACCCGGCCCACAACCCGATCCAGAACCGCCCGCCCACGGAGGTCCGATTCGCGCGGTGGAACAACGCCAACGCCGAGAAATTCAACCAGCGCCGCCGCGCCCAGCAAGAAATCGAGGACGACGTCCGCCGCGAGCGCCGCTTCGACTCCGCCACCAGAATCGCCACCGTCTCCGCCGACGAATCCTCCTCCTCCGACGCCGAAGCAACATTCAAATCCATAGGCACGCCTTCGTCTCCCTCAAGCCCTTCAATTCCGGGCAGAAAATCCAAGTACTCCAAGAACCCTAACCCTAACCCTAGCTCGCACCCGGCGTTTCGCCGCGTCATCAGACCAACGAAGCTCTCGAGTATCTCTAGAGAGAAGCCGGAAATCGACCGGAAAGCTAACATCTCCGTCGGCGACGACGGGCTTTCGTACGTCATCGACGGCGCGCCGTTTGAGTTCAAGTACAGCTACACCGAGACCCCGAAGCAGAAGCCCATTAAGCTCCGGGAGCCGCCCTACGCGCCGTTCGGCCCAACCACGATGGGCCGGCCGTGGACGGGTCGGGCCCCACTGCCTCCGAGCAAGAAGAAACTGAAGGAGTTCGATTCGTTCCAGCTGCCGCCGCCGCATAAGAAAGGGGTTAAGCCGGTGCAGTCGCCGGGTCCGTATTTACCCGGGTCGGGTCCCAAGTATGTCAAGTCCAGGGAGGAGATATTGGGTGAGCCGTTGACCGATCAGGAAGTCAAAGACTTGGTTAATAGCTGTGTTAAGACCAGAAGGCAACTCAATATGGGTAGAGATGGATTGACACACAACATGCTGGATAATATTCATGCTCATTGGAAGCGGCGGAGAGTGTGCAAGATAAAATGTAAAGGGGTGTGTACAGTCGACATGGAAAATGTGTGCCAGCAATTAGAGGAAAGAACTGGAGGGAAAATCATTTATAGAAGAGGTGGGGTGATTTTTCTTTTCCGGGGGAGAAACTACAACTATAAAACTCGGCCGCGGTTTCCTCTCATGCTTTGGAGACCTATCACTCCTGTGTATCCTAGATTGATTCAGAGGGCTCCTGAGGGGCTAACAGTTGAAGAAGCAACTGAAATGCGCAAGAAGGGGAGGAATCTGATACCAATACGCAAGCTAGGAAAAAATGGAGTATACTCTGACCTGGTAGACAATGTCAGAGAGGCCTTTGAAGAGTGTGAACTAGTGCGAATAGATTGTCAAGGGATGAATGGGAGTGACTACCGAAAAATAGGTGCTAAACTAAAGGATCTTGTCCCTTGTGTGCTAATTTCCTTTGAACGCGAGAACATTCTTGTGTGGAAAGGACGGGAATGGAAGTCTTCTTTCCTAAATCCGGAGAGTAATCTTAAGGAAGTCAAAGAATCTGATGTTGATGATTCACCTTCTATTGCACCTTCCTTGGAAGGTGAAGAAGCATCGACGTTATGTGCTTTTACAGCTTCAGTCAATGACGAAAATCCTCAAATGATCGACACTAGTATCACCTCTTCAAGTTCTGAAGTTGTGGGTGCTGAGGGAACTGAGGATCCATCCCCTTCACCATATATTGAGCCATGTGCCACAATTGATACAGTTTCCACTGTGGGAGGCACTTATGAAACTGTAACCATCTCGGACATCAAAGGCTTTAGAAATGATGAAGCAGAATTGGAGATGAAGGCCTATAGCAGTTCAACCATACCACAGGATACCAGGTATGCTCATGATGAGGCAGAAACGATTTCCATCTCAGACATCAAGGGCTTTAGAAATGATGAAGCAGAATTGGAAATGAAGGCCTATAGCAGTTCAACCTTACCGCAGGATACCAGCTATGCTGATGATGAGGCCGAAACAATTTCCAGTACATCTGGAACTGAAAACATATTGGATAGTACATGCCATACTGATGAAGCATCAGCAACTACATCAGTGGGGACCGGGACCGGGACCATGCCAGTGACTGTTGAAAGCACTGAAACGAAGTTGGATTCCCTCATGGTTGCCCCTGGTAGTAATGAGACTCCACAAGATGCTTCTATAGACTCGCAAAATCTCAATGAGCAAGCAAGGTTGAGTGCAGCCTGTAAAGAGAAGGTGATATCACTCTTGAACGAAGCTGTTGGGAGTGGGAGTGCACTTATTTTAGACGATTCGTCGTTGGATGCTGACATCATATATCAGAGGGCAGTTGCTCTCGCCAAGTCTGCTCCACCTGGGCCAGTGTTTAAGCATCGACCTAGGAGAGTTGCAGCTCAAATGAGTAAGAAGCTAGTAGTAAGAAAACAGAAGCAAGAAGCCACGGAGTTGGAAGTGAAAGAGATAACAGTTTATGCGAAGAAGGGAAGTGAGAAGAAGGATTCCAAAGTTCACAGAACAAAAACAAGAGATTTTGGTGAACCTCTAGATAGCATTGTACCACAGGGAAGCCTGAGAGTTGATGAACTTGCTAAGCTATTAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

838

Amino Acids

92.82

Weight (kDa)

7.48

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRS1_YhbY PF01985 257 - 340 1.1e-20 CRS1 / YhbY (CRM) domain
CRS1_YhbY PF01985 375 - 458 4.4e-16 CRS1 / YhbY (CRM) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 180
Acc16I TGCGCA 1 cut(s) 1151
AccI GTMKAC 3 cut(s) 933, 1203, 1218
AccIII TCCGGA 1 cut(s) 1405
AclWI GGATC 4 cut(s) 67, 1326, 1592, 1605
AcoI YGGCCR 2 cut(s) 590, 1046
AcsI RAATTY 2 cut(s) 10, 134
AcuI CTGAAG 3 cut(s) 656, 1497, 1590
AcyI GRCGYC 2 cut(s) 177, 252
AfaI GTAC 7 cut(s) 329, 473, 506, 928, 1918, 1948, 2469
AfiI CCNNNNNNNGG 6 cut(s) 58, 91, 599, 722, 1405, 1998
AflII CTTAAG 1 cut(s) 1418
AgeI ACCGGT 1 cut(s) 43
AhdI GACNNNNNGTC 1 cut(s) 2206
AhlI ACTAGT 2 cut(s) 1252, 1547
AjnI CCWGG 5 cut(s) 743, 1212, 1763, 2059, 2266
AleI CACNNNNGTG 1 cut(s) 1085
AloI GAACNNNNNNTCC 2 cut(s) 1582, 1614
Alw21I GWGCWC 1 cut(s) 2191
Alw26I GTCTC 5 cut(s) 229, 294, 512, 1066, 2066
Alw44I GTGCAC 1 cut(s) 2187
AlwI GGATC 4 cut(s) 67, 1326, 1592, 1605
AlwNI CAGNNNCTG 1 cut(s) 2015
Ama87I CYCGRG 2 cut(s) 400, 716
Aor13HI TCCGGA 1 cut(s) 1405
ApaI GGGCCC 1 cut(s) 610
ApaLI GTGCAC 1 cut(s) 2187
ApeKI GCWGC 3 cut(s) 658, 2132, 2303
ApoI RAATTY 2 cut(s) 10, 134
ArsI GACNNNNNNTTYG 2 cut(s) 1252, 1284
AscI GGCGCGCC 1 cut(s) 486
AsiGI ACCGGT 1 cut(s) 43
Asp700I GAANNNNTTC 1 cut(s) 641
AspA2I CCTAGG 1 cut(s) 2291
AsuHPI GGTGA 9 cut(s) 58, 773, 1015, 1443, 1490, 1546, 1602, 2161, 2459
AvaI CYCGRG 2 cut(s) 400, 716
AvaII GGWCC 6 cut(s) 97, 704, 725, 1989, 1995, 2001
AvrII CCTAGG 1 cut(s) 2291
AxyI CCTNAGG 1 cut(s) 1116
BaeGI GKGCMC 3 cut(s) 29, 610, 2191
BaeI ACNNNNGTAYC 2 cut(s) 1534, 1567
BamHI GGATCC 1 cut(s) 1597
BanII GRGCYC 2 cut(s) 610, 1114
BarI GAAGNNNNNNTAC 2 cut(s) 1543, 1575
BbsI GAAGAC 1 cut(s) 1383
Bbv12I GWGCWC 1 cut(s) 2191
BbvCI CCTCAGC 1 cut(s) 1584
BbvI GCAGC 3 cut(s) 645, 2144, 2315
BccI CCATC 5 cut(s) 577, 836, 1609, 1688, 1805
BceAI ACGGC 5 cut(s) 475, 499, 550, 577, 751
BciT130I CCWGG 5 cut(s) 745, 1214, 1765, 2061, 2268
BciVI GTATCC 3 cut(s) 1101, 1753, 1870
BcoDI GTCTC 5 cut(s) 229, 294, 512, 1066, 2066
BcuI ACTAGT 2 cut(s) 1252, 1547
BfaI CTAG 9 cut(s) 354, 411, 1095, 1187, 1253, 1548, 2292, 2324, 2456
BfmI CTRYAG 3 cut(s) 1735, 1852, 2091
BfoI RGCGCY 3 cut(s) 8, 148, 193
BfrI CTTAAG 1 cut(s) 1418
BfuI GTATCC 3 cut(s) 1101, 1753, 1870
BlnI CCTAGG 1 cut(s) 2291
BlpI GCTNAGC 1 cut(s) 2502
BmcAI AGTACT 1 cut(s) 329
Bme18I GGWCC 6 cut(s) 97, 704, 725, 1989, 1995, 2001
BmeRI GACNNNNNGTC 1 cut(s) 2206
BmeT110I CYCGRG 2 cut(s) 400, 716
BmsI GCATC 5 cut(s) 1496, 1976, 2074, 2206, 2293
BpiI GAAGAC 1 cut(s) 1383
BpmI CTGGAG 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 1584
Bpu1102I GCTNAGC 1 cut(s) 2502
BpuEI CTTGAG 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 1796
BsaHI GRCGYC 2 cut(s) 177, 252
BsaI GGTCTC 2 cut(s) 512, 1066
BsaWI WCCGGW 3 cut(s) 43, 432, 1405
BsaXI ACNNNNNCTCC 4 cut(s) 224, 254, 2170, 2200
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 91, 599, 722, 1405, 1998
Bse118I RCCGGY 3 cut(s) 43, 588, 688
Bse1I ACTGG 4 cut(s) 976, 1914, 2009, 2273
Bse21I CCTNAGG 1 cut(s) 1116
Bse8I GATNNNNATC 1 cut(s) 1796
BseAI TCCGGA 1 cut(s) 1405
BseBI CCWGG 5 cut(s) 745, 1214, 1765, 2061, 2268
BseGI GGATG 3 cut(s) 1281, 1601, 2221
BseJI GATNNNNATC 1 cut(s) 1796
BseLI CCNNNNNNNGG 6 cut(s) 58, 91, 599, 722, 1405, 1998
BseMII CTCAG 5 cut(s) 1107, 1575, 1584, 1815, 2474
BseNI ACTGG 4 cut(s) 976, 1914, 2009, 2273
BsePI GCGCGC 1 cut(s) 486
BseRI GAGGAG 3 cut(s) 232, 235, 764
BseSI GKGCMC 3 cut(s) 29, 610, 2191
BseX3I CGGCCG 2 cut(s) 590, 1046
BseXI GCAGC 3 cut(s) 645, 2144, 2315
BseYI CCCAGC 1 cut(s) 156
BsgI GTGCAG 2 cut(s) 713, 2151
Bsh1285I CGRYCG 3 cut(s) 433, 593, 1049
BshTI ACCGGT 1 cut(s) 43
BsiEI CGRYCG 3 cut(s) 433, 593, 1049
BsiHKAI GWGCWC 1 cut(s) 2191
BsiHKCI CYCGRG 2 cut(s) 400, 716
BsiWI CGTACG 1 cut(s) 471
BslFI GGGAC 5 cut(s) 711, 1310, 2002, 2008, 2014
BslI CCNNNNNNNGG 6 cut(s) 58, 91, 599, 722, 1405, 1998
BsmAI GTCTC 5 cut(s) 229, 294, 512, 1066, 2066
BsmBI CGTCTC 2 cut(s) 229, 294
BsmFI GGGAC 5 cut(s) 711, 1310, 2002, 2008, 2014
Bso31I GGTCTC 2 cut(s) 512, 1066
BsoBI CYCGRG 2 cut(s) 400, 716
Bsp120I GGGCCC 1 cut(s) 606
Bsp1286I GDGCHC 4 cut(s) 29, 610, 1114, 2191
Bsp13I TCCGGA 1 cut(s) 1405
Bsp1407I TGTACA 1 cut(s) 926
Bsp143I GATC 5 cut(s) 72, 775, 1318, 1539, 1597
Bsp1720I GCTNAGC 1 cut(s) 2502
BspCNI CTCAG 5 cut(s) 1108, 1576, 1585, 1814, 2475
BspEI TCCGGA 1 cut(s) 1405
BspHI TCATGA 1 cut(s) 1774
BspPI GGATC 4 cut(s) 67, 1326, 1592, 1605
BspTI CTTAAG 1 cut(s) 1418
BspTNI GGTCTC 2 cut(s) 512, 1066
BsrFI RCCGGY 3 cut(s) 43, 588, 688
BsrGI TGTACA 1 cut(s) 926
BsrI ACTGG 4 cut(s) 976, 1914, 2009, 2273
BssAI RCCGGY 3 cut(s) 43, 588, 688
BssHII GCGCGC 1 cut(s) 486
BssMI GATC 5 cut(s) 72, 775, 1318, 1539, 1597
BssNAI GTATAC 1 cut(s) 1204
BssNI GRCGYC 2 cut(s) 177, 252
BssT1I CCWWGG 2 cut(s) 1470, 2291
Bst1107I GTATAC 1 cut(s) 1204
Bst2UI CCWGG 5 cut(s) 745, 1214, 1765, 2061, 2268
Bst4CI ACNGT 8 cut(s) 223, 931, 1129, 1645, 1654, 1675, 2017, 2380
Bst6I CTCTTC 3 cut(s) 988, 1236, 1564
BstACI GRCGYC 2 cut(s) 177, 252
BstAFI CTTAAG 1 cut(s) 1418
BstAUI TGTACA 1 cut(s) 926
BstC8I GCNNGC 9 cut(s) 86, 188, 281, 359, 488, 590, 953, 1184, 2118
BstDEI CTNAG 6 cut(s) 1116, 1584, 1593, 1801, 2483, 2502
BstDSI CCRYGG 4 cut(s) 90, 593, 1049, 2352
BstF5I GGATG 3 cut(s) 1281, 1601, 2221
BstH2I RGCGCY 3 cut(s) 8, 148, 193
BstKTI GATC 5 cut(s) 75, 778, 1321, 1542, 1600
BstMAI GTCTC 5 cut(s) 229, 294, 512, 1066, 2066
BstMBI GATC 5 cut(s) 72, 775, 1318, 1539, 1597
BstMCI CGRYCG 3 cut(s) 433, 593, 1049
BstNI CCWGG 5 cut(s) 745, 1214, 1765, 2061, 2268
BstNSI RCATGY 2 cut(s) 862, 1953
BstSFI CTRYAG 3 cut(s) 1735, 1852, 2091
BstSLI GKGCMC 3 cut(s) 29, 610, 2191
BstV1I GCAGC 3 cut(s) 645, 2144, 2315
BstV2I GAAGAC 1 cut(s) 1383
BstX2I RGATCY 2 cut(s) 1318, 1597
BstXI CCANNNNNNTGG 1 cut(s) 2359
BstYI RGATCY 2 cut(s) 1318, 1597
BstZ17I GTATAC 1 cut(s) 1204
BstZI CGGCCG 2 cut(s) 590, 1046
Bsu36I CCTNAGG 1 cut(s) 1116
BsuI GTATCC 3 cut(s) 1101, 1753, 1870
BtgI CCRYGG 4 cut(s) 90, 593, 1049, 2352
BtsCI GGATG 3 cut(s) 1281, 1601, 2221
BtsI GCAGTG 1 cut(s) 611
BtsIMutI CAGTG 6 cut(s) 611, 1650, 1989, 2016, 2025, 2280
Cac8I GCNNGC 9 cut(s) 86, 188, 281, 359, 488, 590, 953, 1184, 2118
CaiI CAGNNNCTG 1 cut(s) 2015
CciI TCATGA 1 cut(s) 1774
Cfr10I RCCGGY 3 cut(s) 43, 588, 688
Cfr42I CCGCGG 1 cut(s) 1052
Cfr9I CCCGGG 1 cut(s) 716
CseI GACGC 2 cut(s) 260, 367
CsiI ACCWGGT 2 cut(s) 1212, 1763
Csp6I GTAC 7 cut(s) 328, 472, 505, 927, 1917, 1947, 2468
CspAI ACCGGT 1 cut(s) 43
CviQI GTAC 7 cut(s) 328, 472, 505, 927, 1917, 1947, 2468
DdeI CTNAG 6 cut(s) 1116, 1584, 1593, 1801, 2483, 2502
DpnI GATC 5 cut(s) 74, 777, 1320, 1541, 1599
DpnII GATC 5 cut(s) 72, 775, 1318, 1539, 1597
DriI GACNNNNNGTC 1 cut(s) 2206
EaeI YGGCCR 2 cut(s) 590, 1046
EagI CGGCCG 2 cut(s) 590, 1046
Eam1104I CTCTTC 3 cut(s) 988, 1236, 1564
Eam1105I GACNNNNNGTC 1 cut(s) 2206
EarI CTCTTC 3 cut(s) 988, 1236, 1564
EciI GGCGGA 4 cut(s) 170, 193, 217, 907
EclXI CGGCCG 2 cut(s) 590, 1046
Eco130I CCWWGG 2 cut(s) 1470, 2291
Eco147I AGGCCT 3 cut(s) 1235, 1733, 1850
Eco24I GRGCYC 2 cut(s) 610, 1114
Eco31I GGTCTC 2 cut(s) 512, 1066
Eco32I GATATC 1 cut(s) 2154
Eco47I GGWCC 6 cut(s) 97, 704, 725, 1989, 1995, 2001
Eco52I CGGCCG 2 cut(s) 590, 1046
Eco57I CTGAAG 3 cut(s) 656, 1497, 1590
Eco81I CCTNAGG 1 cut(s) 1116
Eco88I CYCGRG 2 cut(s) 400, 716
EcoO109I RGGNCCY 2 cut(s) 607, 725
EcoRII CCWGG 5 cut(s) 743, 1212, 1763, 2059, 2266
EcoRV GATATC 1 cut(s) 2154
EcoT14I CCWWGG 2 cut(s) 1470, 2291
EcoT38I GRGCYC 2 cut(s) 610, 1114
ErhI CCWWGG 2 cut(s) 1470, 2291
Esp3I CGTCTC 2 cut(s) 229, 294
FaqI GGGAC 5 cut(s) 711, 1310, 2002, 2008, 2014
FauI CCCGC 1 cut(s) 93
FblI GTMKAC 3 cut(s) 933, 1203, 1218
FokI GGATG 3 cut(s) 1288, 1588, 2228
FriOI GRGCYC 2 cut(s) 610, 1114
FseI GGCCGGCC 1 cut(s) 592
FspBI CTAG 9 cut(s) 354, 411, 1095, 1187, 1253, 1548, 2292, 2324, 2456
FspI TGCGCA 1 cut(s) 1151
GsaI CCCAGC 1 cut(s) 160
GsuI CTGGAG 1 cut(s) 993
HaeII RGCGCY 3 cut(s) 8, 148, 193
HgaI GACGC 2 cut(s) 260, 367
Hin1I GRCGYC 2 cut(s) 177, 252
HincII GTYRAC 2 cut(s) 771, 934
HindII GTYRAC 2 cut(s) 771, 934
HphI GGTGA 9 cut(s) 58, 773, 1015, 1443, 1490, 1546, 1602, 2161, 2459
Hpy99I CGWCG 9 cut(s) 179, 236, 254, 455, 461, 464, 485, 1495, 2212
HpyCH4III ACNGT 8 cut(s) 223, 931, 1129, 1645, 1654, 1675, 2017, 2380
HpyCH4IV ACGT 3 cut(s) 177, 474, 1493
HpyCH4V TGCA 6 cut(s) 694, 903, 1463, 2132, 2189, 2303
HpyF3I CTNAG 6 cut(s) 1116, 1584, 1593, 1801, 2483, 2502
HpySE526I ACGT 3 cut(s) 177, 474, 1493
Hsp92I GRCGYC 2 cut(s) 177, 252
KflI GGGWCCC 1 cut(s) 725
Kpn2I TCCGGA 1 cut(s) 1405
KroI GCCGGC 1 cut(s) 588
KroNI GCCGGC 1 cut(s) 590
KspI CCGCGG 1 cut(s) 1052
Kzo9I GATC 5 cut(s) 72, 775, 1318, 1539, 1597
LmnI GCTCC 4 cut(s) 549, 550, 1117, 2266
Lsp1109I GCAGC 3 cut(s) 645, 2144, 2315
LweI GCATC 5 cut(s) 1496, 1976, 2074, 2206, 2293
MabI ACCWGGT 2 cut(s) 1212, 1763
MaeI CTAG 9 cut(s) 354, 411, 1095, 1187, 1253, 1548, 2292, 2324, 2456
MaeII ACGT 3 cut(s) 177, 474, 1493
MaeIII GTNAC 3 cut(s) 1286, 1675, 2011
MalI GATC 5 cut(s) 74, 777, 1320, 1541, 1599
MboI GATC 5 cut(s) 72, 775, 1318, 1539, 1597
MboII GAAGA 9 cut(s) 640, 1005, 1145, 1253, 1383, 1493, 1551, 2401, 2416
MfeI CAATTG 1 cut(s) 1635
MflI RGATCY 2 cut(s) 1318, 1597
MhlI GDGCHC 4 cut(s) 29, 610, 1114, 2191
MluCI AATT 9 cut(s) 10, 134, 306, 956, 1338, 1635, 1718, 1835, 1908
MlyI GAGTC 3 cut(s) 194, 2068, 2090
MmeI TCCRAC 4 cut(s) 273, 2019, 2193, 2340
MroI TCCGGA 1 cut(s) 1405
MroNI GCCGGC 1 cut(s) 588
MroXI GAANNNNTTC 1 cut(s) 641
MseI TTAA 6 cut(s) 540, 684, 798, 810, 1419, 2280
MslI CAYNNNNRTG 4 cut(s) 1085, 1364, 1959, 2009
MspA1I CMGCKG 2 cut(s) 658, 1051
MspCI CTTAAG 1 cut(s) 1418
MunI CAATTG 1 cut(s) 1635
MvaI CCWGG 5 cut(s) 745, 1214, 1765, 2061, 2268
NaeI GCCGGC 1 cut(s) 590
NdeII GATC 5 cut(s) 72, 775, 1318, 1539, 1597
NgoMIV GCCGGC 1 cut(s) 588
NmeAIII GCCGAG 2 cut(s) 154, 1024
NmuCI GTSAC 2 cut(s) 1286, 2011
NsbI TGCGCA 1 cut(s) 1151
NspI RCATGY 2 cut(s) 862, 1953
OliI CACNNNNGTG 1 cut(s) 1085
PaeR7I CTCGAG 1 cut(s) 400
PagI TCATGA 1 cut(s) 1774
PalAI GGCGCGCC 1 cut(s) 486
PauI GCGCGC 1 cut(s) 486
PceI AGGCCT 3 cut(s) 1235, 1733, 1850
PcsI WCGNNNNNNNCGW 6 cut(s) 126, 174, 183, 365, 398, 704
PdiI GCCGGC 1 cut(s) 590
PdmI GAANNNNTTC 1 cut(s) 641
Pfl23II CGTACG 1 cut(s) 471
PflFI GACNNNGTC 2 cut(s) 176, 1223
PfoI TCCNGGA 1 cut(s) 546
PinAI ACCGGT 1 cut(s) 43
PleI GAGTC 3 cut(s) 194, 2068, 2090
PpsI GAGTC 3 cut(s) 194, 2068, 2090
PpuMI RGGWCCY 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 5 cut(s) 743, 1212, 1763, 2059, 2266
PspFI CCCAGC 1 cut(s) 156
PspGI CCWGG 5 cut(s) 743, 1212, 1763, 2059, 2266
PspLI CGTACG 1 cut(s) 471
PspOMI GGGCCC 1 cut(s) 606
PspPPI RGGWCCY 1 cut(s) 725
PstNI CAGNNNCTG 1 cut(s) 2015
PsuI RGATCY 2 cut(s) 1318, 1597
PsyI GACNNNGTC 2 cut(s) 176, 1223
PteI GCGCGC 1 cut(s) 486
PvuII CAGCTG 1 cut(s) 658
RigI GGCCGGCC 1 cut(s) 592
RsaI GTAC 7 cut(s) 329, 473, 506, 928, 1918, 1948, 2469
RsaNI GTAC 7 cut(s) 328, 472, 505, 927, 1917, 1947, 2468
RseI CAYNNNNRTG 4 cut(s) 1085, 1364, 1959, 2009
SacII CCGCGG 1 cut(s) 1052
SalI GTCGAC 1 cut(s) 932
SaqAI TTAA 6 cut(s) 540, 684, 798, 810, 1419, 2280
Sau3AI GATC 5 cut(s) 72, 775, 1318, 1539, 1597
ScaI AGTACT 1 cut(s) 329
SchI GAGTC 3 cut(s) 194, 2068, 2090
SduI GDGCHC 4 cut(s) 29, 610, 1114, 2191
SexAI ACCWGGT 2 cut(s) 1212, 1763
SfaNI GCATC 5 cut(s) 1496, 1976, 2074, 2206, 2293
SfcI CTRYAG 3 cut(s) 1735, 1852, 2091
Sfr274I CTCGAG 1 cut(s) 400
Sfr303I CCGCGG 1 cut(s) 1052
SgrAI CRCCGGYG 1 cut(s) 43
SgrBI CCGCGG 1 cut(s) 1052
SgsI GGCGCGCC 1 cut(s) 486
SinI GGWCC 6 cut(s) 97, 704, 725, 1989, 1995, 2001
SlaI CTCGAG 1 cut(s) 400
SmaI CCCGGG 1 cut(s) 718
SmiMI CAYNNNNRTG 4 cut(s) 1085, 1364, 1959, 2009
SmlI CTYRAG 3 cut(s) 295, 400, 1418
SmoI CTYRAG 3 cut(s) 295, 400, 1418
SpeI ACTAGT 2 cut(s) 1252, 1547
Sse9I AATT 9 cut(s) 10, 134, 306, 956, 1338, 1635, 1718, 1835, 1908
SseBI AGGCCT 3 cut(s) 1235, 1733, 1850
SspI AATATT 1 cut(s) 871
SspMI CTAG 9 cut(s) 354, 411, 1095, 1187, 1253, 1548, 2292, 2324, 2456
StuI AGGCCT 3 cut(s) 1235, 1733, 1850
StyI CCWWGG 2 cut(s) 1470, 2291
TaaI ACNGT 8 cut(s) 223, 931, 1129, 1645, 1654, 1675, 2017, 2380
TaiI ACGT 3 cut(s) 180, 477, 1496
TaqII GACCGA 1 cut(s) 788
TasI AATT 9 cut(s) 10, 134, 306, 956, 1338, 1635, 1718, 1835, 1908
TatI WGTACW 5 cut(s) 327, 504, 926, 1916, 1946
Tru1I TTAA 6 cut(s) 540, 684, 798, 810, 1419, 2280
Tru9I TTAA 6 cut(s) 540, 684, 798, 810, 1419, 2280
TscAI CASTG 6 cut(s) 618, 1657, 1989, 2016, 2032, 2280
TseFI GTSAC 2 cut(s) 1286, 2011
TseI GCWGC 3 cut(s) 658, 2132, 2303
Tsp45I GTSAC 2 cut(s) 1286, 2011
TspDTI ATGAA 9 cut(s) 863, 1292, 1683, 1725, 1742, 1842, 1859, 1977, 2508
TspGWI ACGGA 4 cut(s) 107, 439, 696, 2369
TspMI CCCGGG 1 cut(s) 716
TspRI CASTG 6 cut(s) 618, 1657, 1989, 2016, 2032, 2280
Tth111I GACNNNGTC 2 cut(s) 176, 1223
Vha464I CTTAAG 1 cut(s) 1418
VneI GTGCAC 1 cut(s) 2187
VpaK11BI GGWCC 6 cut(s) 97, 704, 725, 1989, 1995, 2001
XapI RAATTY 2 cut(s) 10, 134
XbaI TCTAGA 2 cut(s) 410, 2455
XceI RCATGY 2 cut(s) 862, 1953
XhoI CTCGAG 1 cut(s) 400
XmaI CCCGGG 1 cut(s) 716
XmaJI CCTAGG 1 cut(s) 2291
XmiI GTMKAC 3 cut(s) 933, 1203, 1218
XmnI GAANNNNTTC 1 cut(s) 641
XspI CTAG 9 cut(s) 354, 411, 1095, 1187, 1253, 1548, 2292, 2324, 2456
ZraI GACGTC 1 cut(s) 178
ZrmI AGTACT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.