MD10G1143900.v1.1

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000165
Physical Location & Seq
Forward (+)
23097642 .. 23099696
2055 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1143900.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGGATAACGAGGTGATTGAATTTGATATTGGGTTGGGAGGAGGGGGAGGCCGAGATGGGGACGATGATTTTGTAGACATTGAGCATCCTGTTGATGATGAGGAAATGGTTGATAGTCCTCTTATGGGAAGTGCCACTGGCAGTGGCAGTGGTATTGTTTTCGGTGGTGGTGAAATTTACTTGCCTGAGGGGGATCTCTTGGACCTTGAGCCATATGATGGCATGGAATTTGAGTCTGAAGAGGCTGCCAAGGCCTTTTACAATTCGTATGCGCGGCGTGTTGGGTTCAGTACTCGTGTCAGTTCCTCACGTCGTTCCAGGCGCGATGGAGCAATCATACAGAGGCAGTTTGTTTGTGCTAAAGAGGGTTTCCGGAATTTGAATGAGAAGCGCACCAAGGATAGGGAGATCAAGCGCCCTCGGACTATCACTAGAGTAGGGTGCAAAGCATCCTTTTCTGTGAAGATGCAAGATTCGGGAAGATGGGTGGTGTCTGGTTTTGTTAAGGAGCATAATCATGAGTTGGTTCCGCCTGATCAGGTGCATTGTCTTCGTTCTCACAGGCAAATATCCGGTCCTGCTAAGACTTTGATTGATACCTTGCAGGCTGCTGGAATGGGCCCCAGGAGGATTATGTCAGCGCTGATTAAGGAATATGGTGGGATAAGCAAAGTCGGATTTACAGAGGTAGACTGTAGGAATTACATGAGGAATAATCGCCAGAAGAGCTTAGATGGGGACATTCAGATGCTTTTGGATTACTTGAGACAAATGCAAGCTGATAACCAGAACTTTTTCTATGCCGTGCGGGGCGATGACGATAAGTCCATGGGAAATGTCATTTGGGCTGATCCAAAGGCAAGGATCAACTATAGTTACTTTGGTGATACTGTTACTTTTGACACTACCTACAGGTCTAACAGGTACCGCTTGCCCTTTGCACCTTTCACAGGGGTGAACCATCACGGACAGCCTGTTTTGTTTGGTTGTGCCTTTCTGATAAATGAATCTGAAGCATCATTCGTTTGGCTGTTCAAAACATGGCTTATGGCAATGTCAGGCTGCCCCCCAGTGTCAATTACCACTGATCATGATCCCGTGATACAGTCAGCCATCAAGCAGGTTTTCCCACAGACCCGGCACCGTTTCTGCAAATGGCACGTCTTTAAGAAATGCCAGGAGAAGCTATCCCATGTGTTTCTTAAACATCCAACTTTTGAAGCAGACTTTCACAAGTGTGTTAATTTGACTGAGTCCATAGAAGAATTTGAGTCTTACTGGTTGTCTCTTGTTGATAAATACAGTCTCAGAGATCATGAATGGATTCAAATGAAATGTCCATTACCCAAAGAAGTGACAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

455

Amino Acids

51.78

Weight (kDa)

6.18

Isoelectric Point (pI)

48.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 86 - 177 1.7e-33 FAR1 DNA-binding domain
MULE PF10551 298 - 391 1e-30 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000165)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G38180
fragaria_vesca FvH4_1g09751 FvH4_1g09751 FvH4_1g09751 FvH4_1g12531 FvH4_1g19193 FvH4_2g07051 FvH4_2g17131 FvH4_2g17131 FvH4_2g28082 FvH4_5g08845 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g26361 FvH4_5g39269 FvH4_6g36651 FvH4_6g38410 FvH4_7g04941 FvH4_7g04941
malus_domestica MD00G1156400.v1.1 MD02G1139600.v1.1 MD05G1144600.v1.1 MD06G1002400.v1.1 MD10G1143900.v1.1 MD15G1227300.v1.1 MD15G1252700.v1.1
prunus_persica Prupe.2G147900_v2.0.a1 Prupe.3G257900_v2.0.a1 Prupe.5G003600_v2.0.a1 Prupe.5G053800_v2.0.a1 Prupe.6G011300_v2.0.a1 Prupe.7G161400_v2.0.a1 Prupe.7G161500_v2.0.a1 Prupe.7G188000_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1 Prupe.8G182700_v2.0.a1
pyrus_communis pycom02g11030 pycom05g13970 pycom06g00250 pycom10g12390 pycom10g12400 pycom15g20220 pycom15g22260 pycom17g05620
rosa_chinensis RchiOBHm_Chr2g0096701 RchiOBHm_Chr2g0100471 RchiOBHm_Chr2g0100481 RchiOBHm_Chr6g0281561 RchiOBHm_Chr7g0187081 RchiOBHm_Chr7g0217201 RchiOBHm_Chr7g0228321
rosa_laevigata RLG00000001574 RLG00000002527 RLG00000008169 RLG00000011104 RLG00000012963 RLG00000013720 RLG00000014615 RLG00000016663 RLG00000018214 RLG00000018621 RLG00000018622 RLG00000022494
rosa_multiflora Rmu_co8187762.1_g000001 Rmu_co8276569.1_g000001 Rmu_sc0000528.1_g000025 Rmu_sc0001095.1_g000001 Rmu_sc0001095.1_g000002 Rmu_sc0001167.1_g000007 Rmu_sc0001758.1_g000042 Rmu_sc0002147.1_g000004 Rmu_sc0002489.1_g000048 Rmu_sc0002564.1_g000015 Rmu_sc0002902.1_g000037 Rmu_sc0003565.1_g000022 Rmu_sc0003576.1_g000008 Rmu_sc0003720.1_g000022 Rmu_sc0003720.1_g000023 Rmu_sc0003862.1_g000023 Rmu_sc0006475.1_g000009 Rmu_sc0006475.1_g000010 Rmu_sc0006735.1_g000001 Rmu_sc0007586.1_g000004 Rmu_sc0009650.1_g000010 Rmu_sc0010963.1_g000005 Rmu_sc0012557.1_g000002 Rmu_sc0020744.1_g000001 Rmu_sc0020745.1_g000002 Rmu_sc0022201.1_g000001 Rmu_sc0022408.1_g000011 Rmu_sc0023414.1_g000001 Rmu_sc0025101.1_g000001 Rmu_ssc0000211.1_g000015 Rmu_ssc0000240.1_g000012
rosa_roxburghii Rroxscaffold_1G00013940 Rroxscaffold_1G00018420 Rroxscaffold_2G00142210 Rroxscaffold_2G00142230 Rroxscaffold_2G00145400 Rroxscaffold_3G00240120 Rroxscaffold_3G00240150 Rroxscaffold_3G00242500 Rroxscaffold_5G00346610 Rroxscaffold_5G00356000 Rroxscaffold_7G00187000 Rroxscaffold_7G00212120
rosa_rugosa Rorug01G0260900 Rorug01G0446900 Rorug02G0059800 Rorug02G0059900 Rorug02G0088400 Rorug02G0088500 Rorug02G0522300 Rorug03G0234100 Rorug03G0234100 Rorug03G0242400 Rorug04G0109900 Rorug04G0326100 Rorug05G0275900 Rorug06G0141600 Rorug06G0141700 Rorug06G0141700 Rorug07G0167200 Rorug07G0247000 Rorug07G0247000 Rorug07G0247100.1
rosa_samantha Rh1AG046800 Rh1AG111600 Rh1AG242600 Rh1CG226400 Rh1DG086400 Rh2AG107200 Rh2AG138100 Rh2AG528600 Rh2BG109600 Rh2BG141200 Rh2BG273400 Rh2BG357800 Rh2BG640200 Rh2CG111400 Rh2CG143400 Rh2CG161100 Rh2CG251300 Rh2DG111000 Rh2DG142900 Rh2DG651100 Rh3BG318000 Rh4AG167800 Rh4AG253700 Rh5AG282900 Rh6AG254100 Rh6BG257100 Rh6CG256400 Rh6DG248200 Rh7AG306100 Rh7BG297500 Rh7CG325200 Rh7CG420200 Rh7DG306000
rosa_wichuraiana Rw2G008310 Rw2G010790 Rw2G010800 Rw2G013840 Rw2G022430 Rw3G020550 Rw3G024980 Rw3G025930 Rw5G026810 Rw5G035870 Rw6G022060 Rw6G030700 Rw7G007420 Rw7G026010 Rw7G033340 Rw7G037700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1111
Acc65I GGTACC 1 cut(s) 924
AccB1I GGYRCC 2 cut(s) 924, 1140
AccB7I CCANNNNNTGG 1 cut(s) 218
AccI GTMKAC 2 cut(s) 75, 690
AccII CGCG 2 cut(s) 274, 324
AccIII TCCGGA 1 cut(s) 372
AciI CCGC 4 cut(s) 274, 530, 808, 928
AclWI GGATC 4 cut(s) 201, 845, 872, 1088
AcsI RAATTY 5 cut(s) 20, 174, 227, 376, 1265
AcuI CTGAAG 2 cut(s) 258, 1032
AfaI GTAC 2 cut(s) 292, 926
AfeI AGCGCT 1 cut(s) 642
AfiI CCNNNNNNNGG 5 cut(s) 58, 125, 218, 402, 950
AgsI TTSAA 5 cut(s) 20, 382, 1036, 1220, 1328
AhdI GACNNNNNGTC 1 cut(s) 823
AjiI CACGTC 2 cut(s) 311, 1162
AjnI CCWGG 3 cut(s) 317, 623, 1176
AjuI GAANNNNNNNTTGG 4 cut(s) 12, 44, 826, 858
AleI CACNNNNGTG 2 cut(s) 953, 1236
AluBI AGCT 3 cut(s) 729, 779, 1186
AluI AGCT 3 cut(s) 729, 779, 1186
Alw26I GTCTC 3 cut(s) 760, 1290, 1310
AlwI GGATC 4 cut(s) 201, 845, 872, 1088
Aor13HI TCCGGA 1 cut(s) 372
Aor51HI AGCGCT 1 cut(s) 642
AoxI GGCC 3 cut(s) 49, 252, 619
ApaI GGGCCC 1 cut(s) 623
ApeKI GCWGC 3 cut(s) 245, 608, 1062
ApoI RAATTY 5 cut(s) 20, 174, 227, 376, 1265
ArsI GACNNNNNNTTYG 8 cut(s) 53, 85, 559, 591, 1146, 1178, 1321, 1353
Asp700I GAANNNNTTC 2 cut(s) 794, 1323
Asp718I GGTACC 1 cut(s) 924
AspLEI GCGC 5 cut(s) 274, 324, 393, 417, 643
AspS9I GGNCC 4 cut(s) 202, 575, 619, 620
AsuC2I CCSGG 1 cut(s) 1138
AsuHPI GGTGA 4 cut(s) 25, 182, 896, 967
AvaII GGWCC 2 cut(s) 202, 575
AxyI CCTNAGG 1 cut(s) 186
BaeGI GKGCMC 1 cut(s) 623
BanI GGYRCC 2 cut(s) 924, 1140
BanII GRGCYC 1 cut(s) 623
BauI CACGAG 1 cut(s) 294
BbsI GAAGAC 1 cut(s) 542
BbvI GCAGC 3 cut(s) 232, 595, 1049
BccI CCATC 7 cut(s) 50, 212, 320, 477, 728, 969, 1121
BceAI ACGGC 1 cut(s) 788
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 3 cut(s) 319, 625, 1178
BclI TGATCA 2 cut(s) 535, 1087
BcnI CCSGG 1 cut(s) 1138
BcoDI GTCTC 3 cut(s) 760, 1290, 1310
BfaI CTAG 1 cut(s) 432
BfmI CTRYAG 3 cut(s) 694, 871, 910
BfoI RGCGCY 2 cut(s) 418, 644
BfuAI ACCTGC 1 cut(s) 1111
BisI GCNGC 4 cut(s) 246, 275, 609, 1063
BlsI GCNGC 4 cut(s) 247, 276, 610, 1064
BmcAI AGTACT 1 cut(s) 292
Bme1390I CCNGG 4 cut(s) 319, 625, 1138, 1178
Bme18I GGWCC 2 cut(s) 202, 575
BmeRI GACNNNNNGTC 1 cut(s) 823
BmgBI CACGTC 2 cut(s) 311, 1162
BmgT120I GGNCC 4 cut(s) 202, 575, 619, 620
BmiI GGNNCC 5 cut(s) 528, 621, 622, 926, 1142
BmrFI CCNGG 4 cut(s) 319, 625, 1138, 1178
BmrI ACTGGG 1 cut(s) 1064
BmsI GCATC 5 cut(s) 94, 456, 458, 738, 1025
BmuI ACTGGG 1 cut(s) 1064
BpiI GAAGAC 1 cut(s) 542
BpuEI CTTGAG 2 cut(s) 227, 784
BpuMI CCSGG 1 cut(s) 1138
BsaBI GATNNNNATC 1 cut(s) 1092
BsaJI CCNNGG 5 cut(s) 249, 396, 419, 623, 828
BsaWI WCCGGW 2 cut(s) 372, 572
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 125, 218, 402, 950
Bse1I ACTGG 3 cut(s) 142, 1070, 1283
Bse21I CCTNAGG 1 cut(s) 186
Bse3DI GCAATG 1 cut(s) 1059
Bse8I GATNNNNATC 1 cut(s) 1092
BseAI TCCGGA 1 cut(s) 372
BseBI CCWGG 3 cut(s) 319, 625, 1178
BseDI CCNNGG 5 cut(s) 249, 396, 419, 623, 828
BseGI GGATG 3 cut(s) 85, 449, 1207
BseJI GATNNNNATC 1 cut(s) 1092
BseLI CCNNNNNNNGG 5 cut(s) 58, 125, 218, 402, 950
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 3 cut(s) 177, 1242, 1321
BseNI ACTGG 3 cut(s) 142, 1070, 1283
BseRI GAGGAG 1 cut(s) 54
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 3 cut(s) 232, 595, 1049
Bsh1236I CGCG 2 cut(s) 274, 324
BshFI GGCC 3 cut(s) 51, 254, 621
BshNI GGYRCC 2 cut(s) 924, 1140
BsiSI CCGG 3 cut(s) 373, 573, 1138
BslFI GGGAC 2 cut(s) 74, 752
BslI CCNNNNNNNGG 5 cut(s) 58, 125, 218, 402, 950
BsmAI GTCTC 3 cut(s) 760, 1290, 1310
BsmFI GGGAC 2 cut(s) 74, 752
BsnI GGCC 3 cut(s) 51, 254, 621
Bsp120I GGGCCC 1 cut(s) 619
Bsp1286I GDGCHC 1 cut(s) 623
Bsp13I TCCGGA 1 cut(s) 372
Bsp143I GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
Bsp19I CCATGG 1 cut(s) 828
BspACI CCGC 4 cut(s) 274, 530, 808, 928
BspANI GGCC 3 cut(s) 51, 254, 621
BspCNI CTCAG 3 cut(s) 178, 1243, 1320
BspEI TCCGGA 1 cut(s) 372
BspFNI CGCG 2 cut(s) 274, 324
BspHI TCATGA 3 cut(s) 517, 1090, 1315
BspLI GGNNCC 5 cut(s) 528, 621, 622, 926, 1142
BspMI ACCTGC 1 cut(s) 1111
BspPI GGATC 4 cut(s) 201, 845, 872, 1088
BspQI GCTCTTC 1 cut(s) 719
BspT107I GGYRCC 2 cut(s) 924, 1140
BsrDI GCAATG 1 cut(s) 1059
BsrI ACTGG 3 cut(s) 142, 1070, 1283
BssECI CCNNGG 5 cut(s) 249, 396, 419, 623, 828
BssMI GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
BssSI CACGAG 1 cut(s) 294
BssT1I CCWWGG 3 cut(s) 249, 396, 828
Bst2BI CACGAG 1 cut(s) 294
Bst2UI CCWGG 3 cut(s) 319, 625, 1178
Bst4CI ACNGT 6 cut(s) 695, 892, 1107, 1145, 1304, 1360
Bst6I CTCTTC 2 cut(s) 234, 719
BstC8I GCNNGC 3 cut(s) 606, 777, 932
BstDEI CTNAG 5 cut(s) 186, 582, 730, 1251, 1307
BstDSI CCRYGG 1 cut(s) 828
BstENI CCTNNNNNAGG 1 cut(s) 948
BstF5I GGATG 3 cut(s) 85, 449, 1207
BstFNI CGCG 2 cut(s) 274, 324
BstH2I RGCGCY 2 cut(s) 418, 644
BstHHI GCGC 5 cut(s) 274, 324, 393, 417, 643
BstKTI GATC 8 cut(s) 196, 411, 538, 853, 867, 1090, 1096, 1315
BstMAI GTCTC 3 cut(s) 760, 1290, 1310
BstMBI GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
BstMWI GCNNNNNNNGC 2 cut(s) 251, 726
BstNI CCWGG 3 cut(s) 319, 625, 1178
BstSCI CCNGG 4 cut(s) 317, 623, 1136, 1176
BstSFI CTRYAG 3 cut(s) 694, 871, 910
BstSLI GKGCMC 1 cut(s) 623
BstUI CGCG 2 cut(s) 274, 324
BstV1I GCAGC 3 cut(s) 232, 595, 1049
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 1 cut(s) 193
BstYI RGATCY 1 cut(s) 193
Bsu36I CCTNAGG 1 cut(s) 186
BsuRI GGCC 3 cut(s) 51, 254, 621
BtgI CCRYGG 1 cut(s) 828
BtgZI GCGATG 2 cut(s) 339, 828
BtrI CACGTC 2 cut(s) 311, 1162
BtsCI GGATG 3 cut(s) 85, 449, 1207
BtsI GCAGTG 2 cut(s) 148, 154
BtsIMutI CAGTG 5 cut(s) 135, 148, 154, 1077, 1083
BveI ACCTGC 1 cut(s) 1111
Cac8I GCNNGC 3 cut(s) 606, 777, 932
CciI TCATGA 3 cut(s) 517, 1090, 1315
CfoI GCGC 5 cut(s) 274, 324, 393, 417, 643
Cfr13I GGNCC 4 cut(s) 202, 575, 619, 620
Csp6I GTAC 2 cut(s) 291, 925
CviAII CATG 8 cut(s) 223, 518, 706, 829, 1041, 1091, 1193, 1316
CviQI GTAC 2 cut(s) 291, 925
DdeI CTNAG 5 cut(s) 186, 582, 730, 1251, 1307
DpnI GATC 8 cut(s) 195, 410, 537, 852, 866, 1089, 1095, 1314
DpnII GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
DriI GACNNNNNGTC 1 cut(s) 823
Eam1104I CTCTTC 2 cut(s) 234, 719
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 2 cut(s) 234, 719
EciI GGCGGA 1 cut(s) 519
Eco130I CCWWGG 3 cut(s) 249, 396, 828
Eco147I AGGCCT 1 cut(s) 254
Eco24I GRGCYC 1 cut(s) 623
Eco47I GGWCC 2 cut(s) 202, 575
Eco47III AGCGCT 1 cut(s) 642
Eco57I CTGAAG 2 cut(s) 258, 1032
Eco81I CCTNAGG 1 cut(s) 186
EcoNI CCTNNNNNAGG 1 cut(s) 948
EcoO109I RGGNCCY 1 cut(s) 620
EcoRII CCWGG 3 cut(s) 317, 623, 1176
EcoT14I CCWWGG 3 cut(s) 249, 396, 828
EcoT38I GRGCYC 1 cut(s) 623
ErhI CCWWGG 3 cut(s) 249, 396, 828
FaeI CATG 8 cut(s) 226, 521, 709, 832, 1044, 1094, 1196, 1319
FaqI GGGAC 2 cut(s) 74, 752
FatI CATG 8 cut(s) 222, 517, 705, 828, 1040, 1090, 1192, 1315
FauI CCCGC 1 cut(s) 801
FauNDI CATATG 1 cut(s) 214
FbaI TGATCA 2 cut(s) 535, 1087
FblI GTMKAC 2 cut(s) 75, 690
Fnu4HI GCNGC 4 cut(s) 246, 275, 609, 1063
FokI GGATG 3 cut(s) 72, 436, 1194
FriOI GRGCYC 1 cut(s) 623
Fsp4HI GCNGC 4 cut(s) 246, 275, 609, 1063
FspBI CTAG 1 cut(s) 432
GlaI GCGC 5 cut(s) 273, 323, 392, 416, 642
GluI GCNGC 4 cut(s) 246, 275, 609, 1063
HaeII RGCGCY 2 cut(s) 418, 644
HaeIII GGCC 3 cut(s) 51, 254, 621
HapII CCGG 3 cut(s) 373, 573, 1138
HhaI GCGC 5 cut(s) 274, 324, 393, 417, 643
Hin1II CATG 8 cut(s) 226, 521, 709, 832, 1044, 1094, 1196, 1319
Hin6I GCGC 5 cut(s) 272, 322, 391, 415, 641
HinP1I GCGC 5 cut(s) 272, 322, 391, 415, 641
HinfI GANTC 6 cut(s) 233, 473, 1007, 1253, 1271, 1324
HpaII CCGG 3 cut(s) 373, 573, 1138
HphI GGTGA 4 cut(s) 25, 182, 896, 967
Hpy166II GTNNAC 3 cut(s) 76, 691, 958
Hpy188I TCNGA 7 cut(s) 238, 423, 677, 747, 999, 1012, 1310
Hpy188III TCNNGA 5 cut(s) 373, 477, 518, 1091, 1316
Hpy8I GTNNAC 3 cut(s) 76, 691, 958
Hpy99I CGWCG 1 cut(s) 315
HpyCH4III ACNGT 6 cut(s) 695, 892, 1107, 1145, 1304, 1360
HpyCH4IV ACGT 2 cut(s) 310, 1161
HpyCH4V TGCA 7 cut(s) 444, 469, 544, 604, 775, 941, 1152
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 726
HpyF3I CTNAG 5 cut(s) 186, 582, 730, 1251, 1307
HpySE526I ACGT 2 cut(s) 310, 1161
Hsp92II CATG 8 cut(s) 226, 521, 709, 832, 1044, 1094, 1196, 1319
HspAI GCGC 5 cut(s) 272, 322, 391, 415, 641
Kpn2I TCCGGA 1 cut(s) 372
KpnI GGTACC 1 cut(s) 928
Ksp22I TGATCA 2 cut(s) 535, 1087
Kzo9I GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
LguI GCTCTTC 1 cut(s) 719
LmnI GCTCC 2 cut(s) 329, 508
Lsp1109I GCAGC 3 cut(s) 232, 595, 1049
LweI GCATC 5 cut(s) 94, 456, 458, 738, 1025
MaeI CTAG 1 cut(s) 432
MaeII ACGT 2 cut(s) 310, 1161
MaeIII GTNAC 3 cut(s) 875, 892, 1354
MalI GATC 8 cut(s) 195, 410, 537, 852, 866, 1089, 1095, 1314
MboI GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
MboII GAAGA 6 cut(s) 251, 475, 492, 542, 736, 1274
MflI RGATCY 1 cut(s) 193
MhlI GDGCHC 1 cut(s) 623
MluCI AATT 9 cut(s) 20, 174, 227, 262, 376, 700, 1077, 1243, 1265
MlyI GAGTC 3 cut(s) 242, 1262, 1280
MmeI TCCRAC 2 cut(s) 655, 1235
MroI TCCGGA 1 cut(s) 372
MroXI GAANNNNTTC 2 cut(s) 794, 1323
MseI TTAA 5 cut(s) 504, 648, 1167, 1203, 1242
MslI CAYNNNNRTG 4 cut(s) 516, 746, 953, 1236
MspI CCGG 3 cut(s) 373, 573, 1138
MspR9I CCNGG 4 cut(s) 319, 625, 1138, 1178
MvaI CCWGG 3 cut(s) 319, 625, 1178
MvnI CGCG 2 cut(s) 274, 324
MwoI GCNNNNNNNGC 2 cut(s) 251, 726
NciI CCSGG 1 cut(s) 1138
NcoI CCATGG 1 cut(s) 828
NdeI CATATG 1 cut(s) 214
NdeII GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
NlaIII CATG 8 cut(s) 226, 521, 709, 832, 1044, 1094, 1196, 1319
NlaIV GGNNCC 5 cut(s) 528, 621, 622, 926, 1142
NmeAIII GCCGAG 1 cut(s) 77
NmuCI GTSAC 1 cut(s) 1354
OliI CACNNNNGTG 2 cut(s) 953, 1236
PagI TCATGA 3 cut(s) 517, 1090, 1315
PceI AGGCCT 1 cut(s) 254
PciSI GCTCTTC 1 cut(s) 719
PdmI GAANNNNTTC 2 cut(s) 794, 1323
PfeI GAWTC 3 cut(s) 473, 1007, 1324
PflFI GACNNNGTC 1 cut(s) 1252
PflMI CCANNNNNTGG 1 cut(s) 218
PkrI GCNGC 4 cut(s) 247, 276, 610, 1064
PleI GAGTC 3 cut(s) 241, 1261, 1279
PpsI GAGTC 3 cut(s) 241, 1261, 1279
Psp6I CCWGG 3 cut(s) 317, 623, 1176
PspGI CCWGG 3 cut(s) 317, 623, 1176
PspN4I GGNNCC 5 cut(s) 528, 621, 622, 926, 1142
PspOMI GGGCCC 1 cut(s) 619
PspPI GGNCC 4 cut(s) 202, 575, 619, 620
PsuI RGATCY 1 cut(s) 193
PsyI GACNNNGTC 1 cut(s) 1252
RsaI GTAC 2 cut(s) 292, 926
RsaNI GTAC 2 cut(s) 291, 925
RseI CAYNNNNRTG 4 cut(s) 516, 746, 953, 1236
SapI GCTCTTC 1 cut(s) 719
SaqAI TTAA 5 cut(s) 504, 648, 1167, 1203, 1242
SatI GCNGC 4 cut(s) 246, 275, 609, 1063
Sau3AI GATC 8 cut(s) 193, 408, 535, 850, 864, 1087, 1093, 1312
Sau96I GGNCC 4 cut(s) 202, 575, 619, 620
ScaI AGTACT 1 cut(s) 292
SchI GAGTC 3 cut(s) 242, 1262, 1280
ScrFI CCNGG 4 cut(s) 319, 625, 1138, 1178
SduI GDGCHC 1 cut(s) 623
SfaNI GCATC 5 cut(s) 94, 456, 458, 738, 1025
SfcI CTRYAG 3 cut(s) 694, 871, 910
SinI GGWCC 2 cut(s) 202, 575
SmiMI CAYNNNNRTG 4 cut(s) 516, 746, 953, 1236
SmlI CTYRAG 2 cut(s) 206, 763
SmoI CTYRAG 2 cut(s) 206, 763
Sse9I AATT 9 cut(s) 20, 174, 227, 262, 376, 700, 1077, 1243, 1265
SseBI AGGCCT 1 cut(s) 254
SsiI CCGC 4 cut(s) 274, 530, 808, 928
SspMI CTAG 1 cut(s) 432
StuI AGGCCT 1 cut(s) 254
StyD4I CCNGG 4 cut(s) 317, 623, 1136, 1176
StyI CCWWGG 3 cut(s) 249, 396, 828
TaaI ACNGT 6 cut(s) 695, 892, 1107, 1145, 1304, 1360
TaiI ACGT 2 cut(s) 313, 1164
TasI AATT 9 cut(s) 20, 174, 227, 262, 376, 700, 1077, 1243, 1265
TatI WGTACW 1 cut(s) 290
TauI GCSGC 1 cut(s) 277
TfiI GAWTC 3 cut(s) 473, 1007, 1324
Tru1I TTAA 5 cut(s) 504, 648, 1167, 1203, 1242
Tru9I TTAA 5 cut(s) 504, 648, 1167, 1203, 1242
TscAI CASTG 5 cut(s) 142, 148, 154, 1077, 1090
TseFI GTSAC 1 cut(s) 1354
TseI GCWGC 3 cut(s) 245, 608, 1062
Tsp45I GTSAC 1 cut(s) 1354
TspDTI ATGAA 3 cut(s) 1020, 1332, 1346
TspGWI ACGGA 1 cut(s) 981
TspRI CASTG 5 cut(s) 142, 148, 154, 1077, 1090
Tth111I GACNNNGTC 1 cut(s) 1252
Van91I CCANNNNNTGG 1 cut(s) 218
VpaK11BI GGWCC 2 cut(s) 202, 575
XagI CCTNNNNNAGG 1 cut(s) 948
XapI RAATTY 5 cut(s) 20, 174, 227, 376, 1265
XmiI GTMKAC 2 cut(s) 75, 690
XmnI GAANNNNTTC 2 cut(s) 794, 1323
XspI CTAG 1 cut(s) 432
ZrmI AGTACT 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.